1 k__Archaea 6740 seqs 1.1 Unclassified 5 seqs 1.1.1 OTU 5 seqs prokMSA_id:51 AJ133623.1 hypersaline brine sediment clone KTK18A prokMSA_id:773 AB019746.1 hydrothermal vent clone pMC2A211 prokMSA_id:211317 AB293233.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Pcsc1A32 prokMSA_id:247740 DQ925866.1 Microbes and Thermal Gradients Temperature Hydrothermal Chimneys hydrothermal vent chimneys Guaymas Basin clone 182A72 prokMSA_id:270057 AB424703.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Fhm4A38 1.2 p__Crenarchaeota 2005 seqs 1.2.1 Unclassified 19 seqs 1.2.1.2 OTU 19 seqs prokMSA_id:772 AB019719.1 hydrothermal vent clone pMC2A209 prokMSA_id:837 U63339.1 hot spring clone pSL17 prokMSA_id:919 U63340.1 hot spring clone pSL22 prokMSA_id:73608 AF419653.1 Guaymas Basin hydrothermal sediment clone AT_R021 prokMSA_id:142115 AB243805.1 Archaeal anaerobic rice paddy soil clone NRP-N prokMSA_id:142964 DQ300322.1 Archaeal and geochemical energy yields on Vulcano Island Italy geothermal well clone VulcPIw.115 prokMSA_id:177633 AB260058.1 Microbial black exposed hot ridge flank crustal fluids Black rust formation on borehole observatory CORK 1026B clone CORK.A40 prokMSA_id:202477 DQ522938.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-22 prokMSA_id:203261 DQ522940.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-25 prokMSA_id:268471 AAYJ01000089.1 Coxiella burnetii str. RSA 334 prokMSA_id:269121 NZ_AAYJ01000089.1 Coxiella burnetii str. RSA 334 prokMSA_id:277665 EU635907.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 77 C clone SSE_L4_D02 prokMSA_id:279063 EU635906.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 87 C clone SSW_L4_G05 prokMSA_id:316368 EU924229.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC3_L5_B12 prokMSA_id:330020 EU924228.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC4_L2_G04 prokMSA_id:395774 FJ810534.1 Subsurface ecosystem resilience: Long-term attenuation subsurface contaminants supports elaborate eukaryotic food chain and dynamic microbial coal tar waste-contaminated groundwater clone JMYA30_A3630 prokMSA_id:530020 GU135493.1 archaeal Lake Pavin sediment (11 cm) clone Pav-sed-513 prokMSA_id:560816 DQ004666.1 Microbial Reduce Methane Efflux Mud Volcano Sediments Gulf Cadiz marine hydrocarbon seep sediment clone CAVMV300A960 prokMSA_id:574071 AB525476.1 Segregated ANME-1 and -2 cold-seep marine sediments deep-sea methane seep sediment off Joetsu Japan Sea clone UT06_10_52A_07 1.2.10 c__Sd-NA 57 seqs 1.2.10.1 Unclassified 40 seqs 1.2.10.1.15 OTU 40 seqs prokMSA_id:1006 U63343.1 hot spring clone pSL12 prokMSA_id:108942 AB193977.1 deep-sea vent clone Sd-NA prokMSA_id:115168 AJ937875.1 Lake Vilar clone 2C3 prokMSA_id:115209 AJ937878.1 Lake Vilar clone C10 prokMSA_id:127052 AB213098.1 hydrothermal fluid clone Papm3A43 prokMSA_id:141858 DQ300331.1 Archaeal and geochemical energy yields on Vulcano Island Italy geothermal well clone VulcPIw.207 prokMSA_id:142331 DQ300328.1 Archaeal and geochemical energy yields on Vulcano Island Italy geothermal well clone VulcPIw.170 prokMSA_id:144905 DQ243758.1 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Obsidian Pool clone YNP_ObP_A62 prokMSA_id:185056 EF100626.1 Prokaryotic Populations Heated Arsenic-Rich Sediments Shal Submarine Hydrothermal System Ambitle Island Papua New Guinea vent 4 transect 2.5 m source clone PNG_TB_4A2.5H2_A60 prokMSA_id:203982 AB293209.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Fhm2A58 prokMSA_id:241157 AB329778.1 Microbial southern Mariana trough hydrothermal deposits clone YS16Ac79 prokMSA_id:244423 EU155999.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B5C prokMSA_id:246140 AB329796.1 Microbial southern Mariana trough hydrothermal deposits clone YS16As48 prokMSA_id:253596 DQ837283.1 Archaeal and pristine National Park Spain Donana coastal aquifer clone 49S_2A_3 prokMSA_id:255609 EF597687.1 Metagenomics deep mediterranean warm bathypelagic habitat 3010m depth Ionian Km3 Station Mediterranean Sea clone KM3-153-F8 prokMSA_id:280494 EU650268.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 263exp4 prokMSA_id:280632 EU650270.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 348exp4 prokMSA_id:280819 EU650250.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C :26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 194exp5 prokMSA_id:281135 EU650262.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 082exp4 prokMSA_id:281578 EU650269.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C :26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 270exp5 prokMSA_id:283041 EU650243.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 076exp4 prokMSA_id:283095 EU650236.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 015exp4 prokMSA_id:283606 EU650254.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 372exp4 prokMSA_id:284878 EU650247.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 111exp4 prokMSA_id:285619 EU650261.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C :26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 050exp5 prokMSA_id:285730 EU650265.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 151exp4 prokMSA_id:286663 EU650266.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C :26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 178exp5 prokMSA_id:286897 EU650263.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C :26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 093exp5 prokMSA_id:307764 FJ150816.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C 26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 078exp5 prokMSA_id:308711 FJ150798.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 062exp4 prokMSA_id:316730 FJ150805.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C 26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 101exp5 prokMSA_id:318854 FJ150803.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 083exp4 prokMSA_id:319869 EU686631.2 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 3010m deep Ionian Sea clone KM3-153-F8 prokMSA_id:336346 FJ150808.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C 26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 013exp5 prokMSA_id:341277 EU686620.1 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 1000m deep Adriatic Sea clone AD1000-325-A12 prokMSA_id:344810 FJ150802.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 081exp4 prokMSA_id:515267 GU135495.1 archaeal Lake Pavin sediment (11 cm) clone Pav-sed-515 prokMSA_id:552713 FJ902676.1 phreatic limestone sinkholes northeastern Mexico biomat 80m deep cenote La Palita clone LP80MA36 prokMSA_id:581072 FJ902680.1 phreatic limestone sinkholes northeastern Mexico biomat 80m deep cenote La Palita clone LP80MA6 prokMSA_id:586076 FJ901466.1 phreatic limestone sinkholes northeastern Mexico biomat 80m deep cenote La Palita clone LP80MA48 1.2.10.2 o__NRP-J 17 seqs 1.2.10.2.16 OTU 17 seqs prokMSA_id:141403 DQ278155.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone OdenF-150iiia prokMSA_id:141495 AB243803.1 Archaeal anaerobic rice paddy soil clone NRP-L prokMSA_id:141782 DQ278142.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone OdenE-150iiia prokMSA_id:141804 DQ278143.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone OdenE-150iia prokMSA_id:142253 DQ278141.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone RotE-9500iiia prokMSA_id:142340 AB243804.1 Archaeal anaerobic rice paddy soil clone NRP-M prokMSA_id:142893 DQ278154.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone RotF-9500iiia prokMSA_id:143239 DQ223192.1 subsurface water clone EV221H2111601H168 prokMSA_id:143621 AB243795.1 Archaeal anaerobic rice paddy soil clone NRP-D prokMSA_id:143641 DQ278153.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone OdenF-150iia prokMSA_id:143651 AB243793.1 Archaeal anaerobic rice paddy soil clone NRP-B prokMSA_id:144107 AB243794.1 Archaeal anaerobic rice paddy soil clone NRP-C prokMSA_id:144188 DQ278152.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone RotF-135iia prokMSA_id:144351 DQ278140.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone RotE-135iia prokMSA_id:144887 AB243801.1 Archaeal anaerobic rice paddy soil clone NRP-J prokMSA_id:244960 AB262708.1 microorganisms shal subsurface Sarobetsu mire peat soil clone HSM050P--7 prokMSA_id:255340 AB262709.1 microorganisms shal subsurface Sarobetsu mire peat soil clone HSM050P--8 1.2.11 c__Thaumarchaeota 1022 seqs 1.2.11.1 o__Cenarchaeales 745 seqs 1.2.11.1.1 f__Cenarchaeaceae 718 seqs 1.2.11.1.1.1 Unclassified 171 seqs 1.2.11.1.1.1.17 OTU 171 seqs prokMSA_id:1051 AF119127.1 deep-sea sediment clone CRA8-11cm prokMSA_id:1055 AF119136.1 deep-sea sediment clone APA3-0cm prokMSA_id:1126 U71109.1 Prof Marti cruise North Atlantic at depth 500m clone PM7 prokMSA_id:30405 AB050234.1 deep subsurface clone SAGMA-3 prokMSA_id:31165 AB050238.1 deep subsurface clone SAGMA-8 prokMSA_id:41550 AB050207.1 deep subsurface clone SAGMA-C prokMSA_id:46043 U40238.2 marine group I crenarchaeote 4B7 clone prokMSA_id:50748 AB050205.1 deep subsurface clone SAGMA-A prokMSA_id:72363 AY082453.1 neutral pH mine biofilm clone 44a-A1-12 prokMSA_id:98912 AY627471.1 deep-sea clone BC05-1A-47 prokMSA_id:99227 AY627473.1 deep-sea clone BC05-1A-50 prokMSA_id:100150 AY505048.1 carbonate hydrothermal chimney at Lost City Field Mid-Atlantic Ridge clone LC1231a72 prokMSA_id:100621 AB113625.1 subsurface geothermal water clone HAuD-MA13 prokMSA_id:102698 AY592543.1 deep-sea mud volcano clone Napoli-3A-37; BC07-3A-37 prokMSA_id:103996 AY505050.1 carbonate hydrothermal chimney at Lost City Field Mid-Atlantic Ridge clone LC1231a78 prokMSA_id:104153 AY505051.1 carbonate hydrothermal chimney at Lost City Field Mid-Atlantic Ridge clone LC1231a80 prokMSA_id:104620 AY505054.1 carbonate hydrothermal chimney at Lost City Field Mid-Atlantic Ridge clone LC1231a86 prokMSA_id:105798 AY592516.1 deep-sea mud volcano clone Napoli-3A-05; BC07-3A-05 prokMSA_id:112708 AB194001.1 deep-sea vent clone Sd-EA05 prokMSA_id:137954 DQ133423.1 Indigenous and contaminant microbes ultradeep mines mine clone E548AIRAA prokMSA_id:138353 DQ133425.1 Indigenous and contaminant microbes ultradeep mines mine clone E548AIRAC prokMSA_id:140284 DQ085102.1 Isolation autotrophic ammonia-oxidizing marine tropical seawater tank substratum Seattle Aquarium clone SeAqRB09 prokMSA_id:177496 EF069358.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC22 prokMSA_id:181636 EF069360.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC24 prokMSA_id:183473 EF069361.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2bARC03 prokMSA_id:185612 EF069384.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:3406m clone PS8ARC45 prokMSA_id:186548 EF069354.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2bARC10 prokMSA_id:193496 EF069362.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC16 prokMSA_id:194916 EF069357.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC15 prokMSA_id:195292 EF069355.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2bARC23 prokMSA_id:195741 EF069385.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:3406m clone PS8ARC12 prokMSA_id:195879 EF069376.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2621m clone PS7ARC22 prokMSA_id:196732 EF069356.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC31 prokMSA_id:196754 EF069387.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:3406m clone PS8ARC01 prokMSA_id:199038 EF069359.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC17 prokMSA_id:203774 AB294265.1 Microbial structure deep coal seem groundwater stream clone SWA09 prokMSA_id:210741 AB294264.1 Microbial structure deep coal seem groundwater stream clone SWA08 prokMSA_id:211892 AB293246.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Pltc1A21 prokMSA_id:244418 EU284616.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-H2 prokMSA_id:248479 EU284603.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-C4 prokMSA_id:255920 EU284599.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-B3 prokMSA_id:321018 AB461943.1 Microbial areas southern Mariana Trough hydrothermal fluids clone Fapm1aA49 prokMSA_id:324008 FJ150832.1 se RV Pelagia on 0.2um polycarbonate filter depth 2071m water mass: Iceland-Scotland Overf Water(ISOW) 2.57 salinity: 34.98 pot temperature: 2.42 degrees C 27.92 kg/m3 concentration: 292.3 apparent oxygen utilization: 36.10 umol/kg clone T1_35_A2-35 prokMSA_id:329323 AB461944.1 Microbial areas southern Mariana Trough hydrothermal fluids clone Fapm1aA50 prokMSA_id:349600 AB461942.1 Microbial areas southern Mariana Trough hydrothermal fluids clone Fapm1aA17 prokMSA_id:399533 FJ810537.1 Subsurface ecosystem resilience: Long-term attenuation subsurface contaminants supports elaborate eukaryotic food chain and dynamic microbial coal tar waste-contaminated groundwater clone JMYA68 prokMSA_id:406058 FJ971897.1 Growth ammonia oxidizing archaea microcosms inhibited acetylene soil clone DGGE gel band 1-3 prokMSA_id:409343 FJ971895.1 Growth ammonia oxidizing archaea microcosms inhibited acetylene soil clone DGGE gel band 1-1 prokMSA_id:431858 FJ810538.1 Subsurface ecosystem resilience: Long-term attenuation subsurface contaminants supports elaborate eukaryotic food chain and dynamic microbial coal tar waste-contaminated groundwater clone JMYA74 prokMSA_id:439385 FJ971896.1 Growth ammonia oxidizing archaea microcosms inhibited acetylene soil clone DGGE gel band 1-2 prokMSA_id:508818 FJ571953.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-58a prokMSA_id:509403 FJ571891.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-88a prokMSA_id:509407 FJ571838.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-35a prokMSA_id:509765 FJ571671.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-20a prokMSA_id:510132 FJ571886.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-83a prokMSA_id:510227 FJ571837.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-34a prokMSA_id:510415 FJ571839.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-36a prokMSA_id:510586 FJ571935.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-40a prokMSA_id:510903 FJ571911.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-16a prokMSA_id:510958 FJ487511.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG12_60_70_A11 prokMSA_id:511142 FJ571691.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-40a prokMSA_id:511162 FJ571965.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-70a prokMSA_id:511243 FJ487548.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_10_11_A2 prokMSA_id:511364 FJ571819.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-16a prokMSA_id:511441 FJ571908.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-13a prokMSA_id:511547 FJ487553.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_10_11_A32 prokMSA_id:511555 FJ571920.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-25a prokMSA_id:511888 FJ571852.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-49a prokMSA_id:512519 FJ571664.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-13a prokMSA_id:512605 FJ571859.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-56a prokMSA_id:512924 FJ571867.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-64a prokMSA_id:513277 FJ487549.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_10_11_A21 prokMSA_id:513406 FJ571853.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-50a prokMSA_id:513527 FJ571890.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-87a prokMSA_id:513593 FJ487558.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_10_11_A69 prokMSA_id:513881 FJ571815.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-12a prokMSA_id:514013 FJ571857.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-54a prokMSA_id:533122 FJ571828.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-25a prokMSA_id:533481 FJ571832.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-29a prokMSA_id:533614 FJ571900.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-5a prokMSA_id:534530 FJ571834.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-31a prokMSA_id:534777 FJ571827.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-24a prokMSA_id:535202 FJ571712.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-61a prokMSA_id:535899 FJ571910.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-15a prokMSA_id:536255 FJ571978.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-83a prokMSA_id:536614 GU137372.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 30m source clone PNG_TB_4B30H1_A102 prokMSA_id:536692 FJ571845.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-42a prokMSA_id:536718 FJ571672.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-21a prokMSA_id:536990 FJ571861.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-58a prokMSA_id:537704 FJ487560.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_10_11_A54 prokMSA_id:538540 FJ571869.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-66a prokMSA_id:539262 FJ571885.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-82a prokMSA_id:540203 FJ571666.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-15a prokMSA_id:540261 FJ571673.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-22a prokMSA_id:540305 FJ487546.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_3_4_A48 prokMSA_id:540790 FJ571669.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-18a prokMSA_id:541313 FJ571692.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-41a prokMSA_id:542209 FJ571835.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-32a prokMSA_id:542723 FJ571822.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-19a prokMSA_id:543287 FJ487563.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_10_11_A45 prokMSA_id:543775 FJ571919.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-24a prokMSA_id:544874 FJ571907.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-12a prokMSA_id:545027 FJ487520.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG12_60_70_A30 prokMSA_id:545032 FJ571833.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-30a prokMSA_id:545643 FJ571912.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-17a prokMSA_id:547138 FJ571825.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-22a prokMSA_id:547141 FJ571917.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-22a prokMSA_id:547398 FJ571961.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-66a prokMSA_id:547475 FJ487545.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_3_4_A44 prokMSA_id:547623 FJ571848.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-45a prokMSA_id:548360 GU137370.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 30m source clone PNG_TB_4B30H1_A013 prokMSA_id:549431 FJ571889.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-86a prokMSA_id:549512 FJ571864.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-61a prokMSA_id:550229 FJ718987.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL water Homestake Mine clone 135 prokMSA_id:550649 FJ571840.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-37a prokMSA_id:550886 FJ571968.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-73a prokMSA_id:550963 FJ752632.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal gyre marine sediments and bottom water clone SPG12_60_70_A43 prokMSA_id:551527 FJ571897.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-2a prokMSA_id:552132 GU363067.1 and archaeal biogeochemical cycling genes within Qiongdongnan basin Sea: pilot study microbial shifting marine sediment South China Sea clone BD72AR9 prokMSA_id:552230 FJ571811.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-8a prokMSA_id:552275 FJ571836.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-33a prokMSA_id:552422 FJ571931.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-36a prokMSA_id:553765 FJ571844.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-41a prokMSA_id:553856 FJ571976.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-81a prokMSA_id:553967 FJ571818.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-15a prokMSA_id:554033 FJ487531.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_3_4_A2 prokMSA_id:554594 FJ487547.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_3_4_A9 prokMSA_id:554789 FJ571915.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-20a prokMSA_id:554925 FJ487517.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG12_60_70_A21 prokMSA_id:555566 FJ571893.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-90a prokMSA_id:556186 FJ571814.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-11a prokMSA_id:557525 FJ571872.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-69a prokMSA_id:557886 FJ571810.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-7a prokMSA_id:557991 FJ571860.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-57a prokMSA_id:558269 FJ571850.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-47a prokMSA_id:561930 FJ571875.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-72a prokMSA_id:562341 FJ487537.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_3_4_A33 prokMSA_id:562749 FJ487515.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG12_60_70_A18 prokMSA_id:562848 FJ571960.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-65a prokMSA_id:562888 FJ571831.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-28a prokMSA_id:563088 FJ571809.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-6a prokMSA_id:563543 FJ571846.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-43a prokMSA_id:565493 FJ571703.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-52a prokMSA_id:565498 FJ571974.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-79a prokMSA_id:565796 FJ487529.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_3_4_A18 prokMSA_id:566543 FJ571686.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-35a prokMSA_id:567539 FJ571878.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-75a prokMSA_id:568400 FJ571652.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-1a prokMSA_id:568829 FJ487507.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A88 prokMSA_id:568836 FJ571918.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-23a prokMSA_id:569312 FJ571880.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-77a prokMSA_id:570907 FJ571830.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-27a prokMSA_id:570918 FJ571699.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-48a prokMSA_id:571790 FJ571823.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-20a prokMSA_id:572557 FJ571812.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-9a prokMSA_id:572592 FJ571808.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-5a prokMSA_id:573264 FJ571849.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-46a prokMSA_id:573345 FJ571863.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-60a prokMSA_id:573575 FJ571829.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-26a prokMSA_id:573655 FJ571881.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-78a prokMSA_id:573707 FJ571843.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-40a prokMSA_id:573775 FJ487476.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A10 prokMSA_id:574960 FJ487532.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_3_4_A21 prokMSA_id:575442 FJ571842.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-39a prokMSA_id:575443 FJ571913.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-18a prokMSA_id:575775 FJ571892.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-89a prokMSA_id:576791 GU137356.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 7.5m source clone PNG_TB_4B7.5H1_A091 prokMSA_id:582358 GU137381.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 140m source clone PNG_TB_4B140H1_A028 prokMSA_id:582482 GU137353.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 7.5m source clone PNG_TB_4B7.5H1_A093 prokMSA_id:586145 GU137385.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 140m source clone PNG_TB_4B140H1_A023 prokMSA_id:592562 GU137357.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 7.5m source clone PNG_TB_4B7.5H1_A026 1.2.11.1.1.2 g__Cenarchaeum 15 seqs 1.2.11.1.1.2.1 Unclassified 10 seqs 1.2.11.1.1.2.1.18 OTU 10 seqs prokMSA_id:19543 AF420236.1 Axinella damicornis symbiont prokMSA_id:31020 AF421159.1 Axinella sp. symbiont prokMSA_id:36985 AF420237.1 Axinella verrucosa symbiont prokMSA_id:100299 AY505049.1 carbonate hydrothermal chimney at Lost City Field Mid-Atlantic Ridge clone LC1231a76 prokMSA_id:153762 DQ299280.1 sponge clone A10A3 prokMSA_id:155789 DQ299278.1 sponge clone A10A5 prokMSA_id:549041 FJ752631.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal gyre marine sediments and bottom water clone SPG11_H2O_A82 prokMSA_id:556642 FJ487501.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A113 prokMSA_id:587193 GU137391.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 300m source clone PNG_TB_4B300H1_A003 prokMSA_id:592356 GU137380.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 140m source clone PNG_TB_4B140H1_A019 1.2.11.1.1.2.2 s__Cenarchaeum symbiosum 5 seqs 1.2.11.1.1.2.2.19 OTU 5 seqs prokMSA_id:1029 U51469.1 Cenarchaeum symbiosum prokMSA_id:69323 AF083071.1 Cenarchaeum symbiosum prokMSA_id:69639 AF083072.1 "Cenarchaeum symbiosum" prokMSA_id:155495 DQ299279.1 sponge clone A9A4 prokMSA_id:155684 DQ299277.1 sponge clone A7G11 1.2.11.1.1.3 g__Nitrosopumilus 532 seqs 1.2.11.1.1.3.1 Unclassified 418 seqs 1.2.11.1.1.3.1.20 OTU 418 seqs prokMSA_id:1050 AF119126.1 deep-sea sediment clone CRA7-11cm prokMSA_id:1098 AB019722.1 hydrothermal vent clone pIVWA101 prokMSA_id:1099 AB019723.1 hydrothermal vent clone pMC2A1 prokMSA_id:1100 AB019724.1 hydrothermal vent clone pMC1A11 prokMSA_id:1101 AB019725.1 hydrothermal vent clone pMC1A103 prokMSA_id:1129 U71112.1 marine clone C6 prokMSA_id:1130 U71113.1 marine clone C11 prokMSA_id:1131 U71114.2 marine clone C20 prokMSA_id:1132 U71115.1 marine clone C33 prokMSA_id:1134 U71117.1 marine clone C46 prokMSA_id:1135 U71118.1 marine clone C48 prokMSA_id:26361 AF393307.1 crenarchaeote and glutamate semialdehyde aminotransferase cds clone 83A10 83A10 prokMSA_id:28911 AJ347774.1 brine-seawater interface clone ST-3K4A archaeal prokMSA_id:33041 AF393305.1 crenarchaeote clone 19H08 prokMSA_id:38520 AF393304.1 crenarchaeote and glutamate semialdehyde aminotransferase cds clone 15G10 15G10 prokMSA_id:50335 AF393306.1 crenarchaeote and glutamate semialdehyde aminotransferase cds clone 31B02 31B02 prokMSA_id:67852 AY082452.1 neutral pH mine biofilm clone 44a-A1-1 prokMSA_id:70288 AF419646.1 Guaymas Basin hydrothermal sediment clone CS_R008 prokMSA_id:70553 AF393466.1 crenarchaeote genomic clone 74A4 prokMSA_id:73495 AF419636.1 Guaymas Basin hydrothermal sediment clone C1_R010 prokMSA_id:79249 AB099992.1 inactive deep-sea hydrothermal vent chimneys clone IndA1-21 prokMSA_id:99988 AY505047.1 carbonate hydrothermal chimney at Lost City Field Mid-Atlantic Ridge clone LC1231a68 prokMSA_id:104308 AY505052.1 carbonate hydrothermal chimney at Lost City Field Mid-Atlantic Ridge clone LC1231a82 prokMSA_id:104467 AY505053.1 carbonate hydrothermal chimney at Lost City Field Mid-Atlantic Ridge clone LC1231a83 prokMSA_id:105856 AY591939.1 marine ANAMMOX sediment clone AY591939 prokMSA_id:108951 AB193986.1 deep-sea vent clone Sc-EA02 prokMSA_id:109794 AY856365.1 2652m. clone CTD005-11A prokMSA_id:139656 DQ085103.1 Isolation autotrophic ammonia-oxidizing marine nitrifying enrichment inoculated substratum tropical seawater tank Seattle Aquarium clone SeAq_T2A1 prokMSA_id:140295 DQ085101.1 Isolation autotrophic ammonia-oxidizing marine tropical seawater tank substratum Seattle Aquarium clone SeAqRB01 prokMSA_id:145417 DQ340995.1 Limits life MgCl2-containing chaotropicity defines window deep anoxic hypersaline basin clone 0.24M_17-0 prokMSA_id:145579 DQ340996.1 Limits life MgCl2-containing chaotropicity defines window deep anoxic hypersaline basin clone 0.24M_772A prokMSA_id:151323 DQ299273.1 sponge clone A15D3 prokMSA_id:152483 DQ424907.1 Genus-specific marine sponges Group I crenarchaeotes sponge clone A15G4 prokMSA_id:154211 DQ299272.1 sponge clone A9A3 prokMSA_id:154353 DQ299266.1 sponge clone app654 prokMSA_id:155526 DQ299268.1 sponge clone A10A11 prokMSA_id:172374 DQ659409.1 Archaeal nitrification ocean enrichment Coastal North Sea water clone MESO_CREN prokMSA_id:173895 EF069345.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC14 prokMSA_id:175045 EF069370.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2621m clone PS7ARC43 prokMSA_id:175609 EF069381.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:3406m clone PS8ARC18 prokMSA_id:176575 EF069339.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC23 prokMSA_id:178096 EF069368.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2621m clone PS7bARC09 prokMSA_id:178454 EF069383.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:3406m clone PS8ARC40 prokMSA_id:180496 EF069371.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2621m clone PS7bARC04 prokMSA_id:181829 EF069344.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2bARC15 prokMSA_id:182042 EF069349.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2bARC16 prokMSA_id:182368 EF069347.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC07 prokMSA_id:182639 EF069378.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:3406m clone PS8ARC36 prokMSA_id:182936 EF069369.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2621m clone PS7ARC24 prokMSA_id:185608 EF069350.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC45 prokMSA_id:185713 EF069343.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2bARC02 prokMSA_id:185788 EF069372.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2621m clone PS7bARC15 prokMSA_id:188374 EF069337.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC30 prokMSA_id:189769 EF069351.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC38 prokMSA_id:190957 EF069342.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC05 prokMSA_id:191756 EF069352.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC11 prokMSA_id:191943 EF069379.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:3406m clone PS8ARC33 prokMSA_id:193552 EF069367.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2621m clone PS7ARC40 prokMSA_id:193659 EF069380.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:3406m clone PS8ARC09 prokMSA_id:195018 EF069382.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:3406m clone PS8ARC06 prokMSA_id:195277 EF069373.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2621m clone PS7ARC11 prokMSA_id:195377 EF069338.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC36 prokMSA_id:195536 EF069377.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:3406m clone PS8ARC27 prokMSA_id:195867 EF069341.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC19 prokMSA_id:196617 EF069348.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2bARC11 prokMSA_id:197473 EF069353.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2bARC07 prokMSA_id:198316 EF069346.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC35 prokMSA_id:208366 AB294266.1 Microbial structure deep coal seem groundwater stream clone SWA10 prokMSA_id:235735 EU284652.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-C10 prokMSA_id:235787 EU284622.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-A8 prokMSA_id:235839 EF645846.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_75 prokMSA_id:236402 EF645852.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_57 prokMSA_id:236405 EU284624.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-B7 prokMSA_id:237158 EU280226.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_6D11 prokMSA_id:237672 EU280231.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSP_E5 prokMSA_id:237832 EU284662.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-G11 prokMSA_id:238498 EF645844.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_62 prokMSA_id:238524 EU280208.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSP_D3 prokMSA_id:238552 EU284643.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-G9 prokMSA_id:239014 EU280234.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSP_A6 prokMSA_id:239308 EF645847.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_59 prokMSA_id:239338 EU284651.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-B9 prokMSA_id:239384 EU280227.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_6D12 prokMSA_id:239541 EU280204.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSP_B6 prokMSA_id:239557 EU284617.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-H4 prokMSA_id:239569 EF645845.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_41 prokMSA_id:239912 EF645842.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_78 prokMSA_id:240015 EU309865.1 Archaea Dominate Ammonia-oxidizing Rhizosphere Freshwater Macrophyte rhizosphere Littorella uniflora Lake Hampen clone LAR_Cren_54 prokMSA_id:240073 EF645849.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_46 prokMSA_id:240381 EU284620.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-A10 prokMSA_id:240789 EU284627.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-C7 prokMSA_id:240969 EU284666.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-H12 prokMSA_id:241037 EU284597.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-A4 prokMSA_id:241053 EU309861.1 Archaea Dominate Ammonia-oxidizing Rhizosphere Freshwater Macrophyte rhizosphere Littorella uniflora Lake Hampen clone LAR_Cren_19 prokMSA_id:241134 EU280206.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSP_C7 prokMSA_id:241251 EF645851.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_60 prokMSA_id:241311 AB329773.1 Microbial southern Mariana trough hydrothermal deposits clone YS16Ac55 prokMSA_id:241424 EF645840.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_11 prokMSA_id:241438 EU284626.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-B9 prokMSA_id:241485 EU280224.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_6A6 prokMSA_id:241513 DQ925860.1 Microbes and Thermal Gradients Temperature Hydrothermal Chimneys hydrothermal vent chimneys Guaymas Basin clone 147A37 prokMSA_id:241649 EU280228.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_6D2 prokMSA_id:241767 EU284661.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-F9 prokMSA_id:241925 EF645854.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_43 prokMSA_id:242410 EU284602.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-C3 prokMSA_id:242475 EU284633.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-D9 prokMSA_id:242768 EF645843.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_25 prokMSA_id:242887 EF076092.1 Sponge- microorganisms: evolution ecology and biotechnological potential Bahamas: Little San Salvador Island clone PKA6 prokMSA_id:243186 EU280225.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_6A7 prokMSA_id:243541 EU280222.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_10H3 prokMSA_id:243544 EU284657.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-E10 prokMSA_id:243669 EU284635.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-E7 prokMSA_id:244292 EU284638.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-F6 prokMSA_id:245072 EU284656.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-D9 prokMSA_id:245079 EU284655.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-D12 prokMSA_id:245091 EU284628.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-C8 prokMSA_id:246067 EU284647.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-A12 prokMSA_id:246271 EF645839.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_89 prokMSA_id:246568 EF645853.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_44 prokMSA_id:246946 EF645848.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_28 prokMSA_id:247652 EU284631.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-D7 prokMSA_id:248110 EU284645.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-H7 prokMSA_id:248333 EU284644.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-H6 prokMSA_id:248794 EF645841.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_13 prokMSA_id:248842 EF076091.1 Sponge- microorganisms: evolution ecology and biotechnological potential Bahamas: Little San Salvador Island clone PKA23 prokMSA_id:248869 EU284654.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-D11 prokMSA_id:249372 EU284623.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-B10 prokMSA_id:249380 EU284596.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-A3 prokMSA_id:249775 AB329802.1 Microbial southern Mariana trough hydrothermal deposits clone YS16As95 prokMSA_id:249898 EF645838.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_92 prokMSA_id:250323 EU280232.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSP_E8 prokMSA_id:250507 EU280229.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_6D5 prokMSA_id:250618 EU284640.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-G5 prokMSA_id:250817 EU309860.1 Archaea Dominate Ammonia-oxidizing Rhizosphere Freshwater Macrophyte rhizosphere Littorella uniflora Lake Hampen clone LAR_Cren_15 prokMSA_id:251000 EU280203.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSP_B4 prokMSA_id:251500 EU284636.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-E8 prokMSA_id:252142 EU280216.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_10E12 prokMSA_id:252302 EU284659.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-F11 prokMSA_id:252329 EU284660.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-F12 prokMSA_id:252880 EU284639.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-F8 prokMSA_id:253021 EU284621.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-A7 prokMSA_id:253228 EU280207.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSP_C9 prokMSA_id:253425 EU280202.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSP_B10 prokMSA_id:254447 EU280201.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSP_A1 prokMSA_id:254760 EU284634.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-E5 prokMSA_id:254834 EU284625.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-B8 prokMSA_id:255871 EU284646.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-A10 prokMSA_id:256160 EU284629.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-C9 prokMSA_id:256489 EU284613.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-F5 prokMSA_id:256916 EU284641.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-G7 prokMSA_id:257065 EU284642.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-G8 prokMSA_id:257198 EU284632.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-D8 prokMSA_id:257623 EU284607.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-E3 prokMSA_id:257947 EU284630.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-D5 prokMSA_id:257976 EU309864.1 Archaea Dominate Ammonia-oxidizing Rhizosphere Freshwater Macrophyte rhizosphere Littorella uniflora Lake Hampen clone LAR_Cren_51 prokMSA_id:258017 EU284601.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-B7 prokMSA_id:285789 EU650244.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 088exp4 prokMSA_id:306512 EU283427.1 Crenarchaeota 'Candidatus Nitrosopumilus maritimus' ascidian crenarchaeote clone A7 prokMSA_id:308169 FJ002874.1 ES 3 cruise RV Pelagia on 0.2um Sterivex filter depth 7155m water mass: Antarctic Bottom Water (AABW) 1.42 salinity: 3475 pot temperature: 0.70 degrees C 27.87 kg/m3 concentration: 222.40 apparent oxygen utilization: 121.40 umol/kg clone A3_75_A1-14 prokMSA_id:308341 AB461949.1 Microbial areas southern Mariana Trough hydrothermal fluids clone FnvA04 prokMSA_id:310547 FJ150829.1 se RV Pelagia on 0.2um polycarbonate filter depth 2071m water mass: Iceland-Scotland Overf Water(ISOW) 2.57 salinity: 34.98 pot temperature: 2.42 degrees C 27.92 kg/m3 concentration: 292.3 apparent oxygen utilization: 36.10 umol/kg clone T1_35_A2-26 prokMSA_id:310719 FM179919.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone a82 prokMSA_id:311105 FJ002873.1 ES 3 cruise RV Pelagia on 0.2um Sterivex filter depth 7155m water mass: Antarctic Bottom Water (AABW) 1.42 salinity: 3475 pot temperature: 0.70 degrees C 27.87 kg/m3 concentration: 222.40 apparent oxygen utilization: 121.40 umol/kg clone A3_75_A2-38 prokMSA_id:311811 AB461947.1 Microbial areas southern Mariana Trough hydrothermal fluids clone FaswA54 prokMSA_id:315545 FJ002862.1 ES 3 cruise RV Pelagia on 0.2um Sterivex filter depth 7155m water mass: Antarctic Bottom Water (AABW) 1.42 salinity: 3475 pot temperature: 0.70 degrees C 27.87 kg/m3 concentration: 222.40 apparent oxygen utilization: 121.40 umol/kg clone A3_75_A1-37 prokMSA_id:315844 EU910614.1 Eukaryal and Archaeal Middle Island sinkhole (Lake Huron USA) sediment clone G7 prokMSA_id:316708 FJ150804.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 085exp4 prokMSA_id:320280 FJ150821.1 se RV Pelagia on 0.2um polycarbonate filter depth 2071m water mass: Iceland-Scotland Overf Water(ISOW) 2.57 salinity: 34.98 pot temperature: 2.42 degrees C 27.92 kg/m3 concentration: 292.3 apparent oxygen utilization: 36.10 umol/kg clone T1_35_A1-14 prokMSA_id:320651 AB461953.1 Microbial areas southern Mariana Trough hydrothermal fluids clone PaswA30 prokMSA_id:321430 AB461945.1 Microbial areas southern Mariana Trough hydrothermal fluids clone Fapm1bA05 prokMSA_id:321844 FJ150833.1 se RV Pelagia on 0.2um polycarbonate filter depth 2071m water mass: Iceland-Scotland Overf Water(ISOW) 2.57 salinity: 34.98 pot temperature: 2.42 degrees C 27.92 kg/m3 concentration: 292.3 apparent oxygen utilization: 36.10 umol/kg clone T1_35_A2-38 prokMSA_id:323689 FJ150830.1 ise RV Pelagia on 0.2um polycarbonate filter depth 2071m water mass: Iceland-Scotland Overf Water(ISOW) 2.57 salinity: 34.98 pot temperature: 2.42 degrees C 27.92 kg/m3 concentration: 292.3 apparent oxygen utilization: 36.10 umol/kg clone T1_35_A2-2 prokMSA_id:325402 EU283426.1 Crenarchaeota 'Candidatus Nitrosopumilus maritimus' ascidian crenarchaeote clone A2 prokMSA_id:327950 EU283423.1 Crenarchaeota 'Candidatus Nitrosopumilus maritimus' ascidian crenarchaeote clone A3 prokMSA_id:335761 FJ150823.1 se RV Pelagia on 0.2um polycarbonate filter depth 2071m water mass: Iceland-Scotland Overf Water(ISOW) 2.57 salinity: 34.98 pot temperature: 2.42 degrees C 27.92 kg/m3 concentration: 292.3 apparent oxygen utilization: 36.10 umol/kg clone T1_35_A1-23 prokMSA_id:337108 EU283425.1 Crenarchaeota 'Candidatus Nitrosopumilus maritimus' ascidian crenarchaeote clone A16 prokMSA_id:343673 FJ150794.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 116exp4 prokMSA_id:348549 FJ150826.1 se RV Pelagia on 0.2um polycarbonate filter depth 2071m water mass: Iceland-Scotland Overf Water(ISOW) 2.57 salinity: 34.98 pot temperature: 2.42 degrees C 27.92 kg/m3 concentration: 292.3 apparent oxygen utilization: 36.10 umol/kg clone T1_35_A1-44 prokMSA_id:348904 EU283424.1 Crenarchaeota 'Candidatus Nitrosopumilus maritimus' ascidian crenarchaeote clone A1 prokMSA_id:355547 EU910613.1 Eukaryal and Archaeal Middle Island sinkhole (Lake Huron USA) sediment clone G47 prokMSA_id:371536 FJ655684.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3F3 prokMSA_id:373149 FJ971121.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone sj4 prokMSA_id:373617 FJ655729.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3C4 prokMSA_id:374625 FJ655720.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3A11 prokMSA_id:376052 FJ655619.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_E8 prokMSA_id:376689 FJ971124.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone sj13 prokMSA_id:380054 FJ655770.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_03C5 prokMSA_id:381062 FJ655761.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3H6 prokMSA_id:382569 FJ971109.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone ar2 prokMSA_id:383194 FJ655690.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3G12 prokMSA_id:383328 FJ655679.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3E8 prokMSA_id:383653 FJ655735.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3D4 prokMSA_id:384953 FJ655698.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3H6 prokMSA_id:386804 FJ655665.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3D1 prokMSA_id:387765 FJ655738.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3D9 prokMSA_id:388180 FJ655618.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_E5 prokMSA_id:390159 FJ655666.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3D10 prokMSA_id:393835 FJ655769.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_03B5 prokMSA_id:396940 FJ655768.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_03A6 prokMSA_id:397239 FJ655734.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3D3 prokMSA_id:397580 FJ971125.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone sj14 prokMSA_id:397746 FJ655616.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_10H3 prokMSA_id:397848 FJ655695.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3G9 prokMSA_id:398323 FJ655760.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3H5 prokMSA_id:400065 FJ971117.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone ar15 prokMSA_id:400361 FJ971123.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone sj6 prokMSA_id:400706 FJ655736.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3D5 prokMSA_id:401845 FJ655754.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3G4 prokMSA_id:403501 FJ655771.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_03C9 prokMSA_id:403782 FJ971116.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone ar13 prokMSA_id:404834 FJ655741.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3E5 prokMSA_id:405820 FJ655688.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3G10 prokMSA_id:408412 FJ655747.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3F5 prokMSA_id:409060 FJ971112.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone ar9 prokMSA_id:410534 FJ655682.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3F12 prokMSA_id:410951 FJ971115.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone ar12 prokMSA_id:411266 FJ971122.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone sj5 prokMSA_id:411635 FJ655722.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3B1 prokMSA_id:413594 FJ655723.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3B4 prokMSA_id:415856 FJ971113.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone ar10 prokMSA_id:416698 FJ655740.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3E3 prokMSA_id:417461 FJ655749.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3F8 prokMSA_id:418097 FJ655737.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3D8 prokMSA_id:418779 FJ655726.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3C1 prokMSA_id:420075 FJ655651.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3B10 prokMSA_id:422977 FJ971108.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone ar1 prokMSA_id:423306 FJ655604.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_D3 prokMSA_id:425727 FJ971126.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone sj10 prokMSA_id:426338 FJ655664.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3C8 prokMSA_id:428536 FJ971120.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone sj2 prokMSA_id:428578 FJ971118.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone ar16 prokMSA_id:429875 FJ655620.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_A6 prokMSA_id:430307 FJ655724.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3B6 prokMSA_id:433444 FJ655697.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3H2 prokMSA_id:434884 FJ655685.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3F4 prokMSA_id:435949 FJ655677.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3E6 prokMSA_id:437101 FJ971119.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone sj1 prokMSA_id:438399 FJ655610.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_10E12 prokMSA_id:439172 FJ655767.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_03A10 prokMSA_id:440889 FJ655669.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3D3 prokMSA_id:443729 FJ655730.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3C6 prokMSA_id:444249 FJ971111.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone ar4 prokMSA_id:444404 FJ655762.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3H7 prokMSA_id:445498 FJ810524.1 Subsurface ecosystem resilience: Long-term attenuation subsurface contaminants supports elaborate eukaryotic food chain and dynamic microbial coal tar waste-contaminated groundwater clone JMYA01_AC01 prokMSA_id:446055 FJ655599.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_B4 prokMSA_id:447706 FJ655757.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3H1 prokMSA_id:450295 FJ655691.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3G4 prokMSA_id:450443 FJ655600.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_B6 prokMSA_id:451918 FJ655743.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3E8 prokMSA_id:454242 FJ971110.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone ar3 prokMSA_id:456892 FJ655598.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_B10 prokMSA_id:459512 FJ655763.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_03H10 prokMSA_id:459860 FJ655744.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3E9 prokMSA_id:461246 FJ655597.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_A1 prokMSA_id:461312 FJ655756.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3G7 prokMSA_id:461462 FJ655663.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3C7 prokMSA_id:461841 FJ655603.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_C9 prokMSA_id:462065 FJ655602.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_C7 prokMSA_id:462741 FJ655758.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3H3 prokMSA_id:464114 FJ655742.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3E7 prokMSA_id:465077 FJ971114.1 Enrichment microaerophilic ammonia-oxidizing crenarchaeotes sediments marine sediment clone ar11 prokMSA_id:465543 FJ810525.1 Subsurface ecosystem resilience: Long-term attenuation subsurface contaminants supports elaborate eukaryotic food chain and dynamic microbial coal tar waste-contaminated groundwater clone JMYA02 prokMSA_id:465758 FJ655748.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3F6 prokMSA_id:466589 FJ655731.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3C7 prokMSA_id:466883 FJ655751.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3G10 prokMSA_id:508888 FJ571945.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-50a prokMSA_id:509081 FJ571711.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-60a prokMSA_id:509464 FJ718939.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 9 prokMSA_id:509670 FJ487475.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A47 prokMSA_id:510203 FJ718975.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL water Homestake Mine clone 031 prokMSA_id:510329 FJ571721.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-6a prokMSA_id:510701 FJ571708.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-57a prokMSA_id:510726 FJ571979.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-84a prokMSA_id:510828 FJ487535.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_3_4_A29 prokMSA_id:510884 FJ718959.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 80 prokMSA_id:510960 FJ718940.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 52 prokMSA_id:511429 FJ718912.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 21 prokMSA_id:511704 FJ487505.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A102 prokMSA_id:512011 FJ571902.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-7a prokMSA_id:512015 FJ571750.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-35a prokMSA_id:512045 FJ571933.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-38a prokMSA_id:512071 FJ487502.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A54 prokMSA_id:512085 FJ571754.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-39a prokMSA_id:512230 FJ571667.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-16a prokMSA_id:512462 FJ571670.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-19a prokMSA_id:512596 FJ718906.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 10 prokMSA_id:512772 FJ571661.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-10a prokMSA_id:513153 FJ487495.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A40 prokMSA_id:513363 FJ718960.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 81 prokMSA_id:513371 FJ571799.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-84a prokMSA_id:513541 FJ718915.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 25 prokMSA_id:513920 FJ571675.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-24a prokMSA_id:513941 FJ718948.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 62 prokMSA_id:524110 AB546961.1 Enrichment marine ammonia-oxidizing nitrifying enrichment coastal sand eelgrass zone isolate NM25Candidatus Nitrosopumilus sp. str. NM25 prokMSA_id:532860 FJ571790.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-75a prokMSA_id:533219 FJ571689.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-38a prokMSA_id:533371 FJ571720.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-5a prokMSA_id:533875 FJ571748.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-33a prokMSA_id:533907 FJ571936.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-41a prokMSA_id:534198 FJ487488.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A103 prokMSA_id:535236 FJ571768.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-53a prokMSA_id:535480 EU420686.1 Archaeal and Kao-Mei Wetland clone KM07-Ca-3 prokMSA_id:536370 FJ718946.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 59 prokMSA_id:536386 FJ571950.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-55a prokMSA_id:536427 FJ571757.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-42a prokMSA_id:537086 FJ571717.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-2a prokMSA_id:537188 FJ487500.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A100 prokMSA_id:537265 FJ487497.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A48 prokMSA_id:537742 GU137382.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 140m source clone PNG_TB_4B140H1_A042 prokMSA_id:537755 FJ571660.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-9a prokMSA_id:538047 FJ571946.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-51a prokMSA_id:538101 FJ571948.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-53a prokMSA_id:539594 FJ571756.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-41a prokMSA_id:539802 FJ571724.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-9a prokMSA_id:540244 FJ571905.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-10a prokMSA_id:540758 FJ718935.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 49 prokMSA_id:541220 FN421233.1 Impact natural oil er hydrocarbons on microbial and activity Gulf Mexico cold seep sediments marine sediments; site GC234 water depth 550 m; isol 0-10cm sed.depth clone GoM87_Arch258 prokMSA_id:541323 FJ571794.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-79a prokMSA_id:541587 FJ718976.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL water Homestake Mine clone 036 prokMSA_id:541833 FJ571668.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-17a prokMSA_id:542356 FJ571728.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-13a prokMSA_id:542426 FJ571760.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-45a prokMSA_id:542731 FJ571883.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-80a prokMSA_id:543494 FJ571927.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-32a prokMSA_id:544543 FJ718927.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 39 prokMSA_id:544745 EU420677.1 Archaeal and Kao-Mei Wetland clone KM07-Aa-8 prokMSA_id:544759 FJ718974.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL water Homestake Mine clone 029 prokMSA_id:544915 FJ571663.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-12a prokMSA_id:545755 FJ571773.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-58a prokMSA_id:545759 FJ718972.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL water Homestake Mine clone 015 prokMSA_id:545779 FJ718917.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 27 prokMSA_id:546219 EU420706.1 Archaeal and Kao-Mei Wetland clone KM07-Fa-3 prokMSA_id:546820 EU420691.1 Archaeal and Kao-Mei Wetland clone KM07-Ca-9 prokMSA_id:546925 GU137354.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 7.5m source clone PNG_TB_4B7.5H1_A030 prokMSA_id:547453 FJ487473.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A21 prokMSA_id:547513 FJ571732.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-17a prokMSA_id:548034 FJ718979.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL water Homestake Mine clone 052 prokMSA_id:548167 FJ718956.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 77 prokMSA_id:548318 FJ571901.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-6a prokMSA_id:549879 FJ571766.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-51a prokMSA_id:550336 FJ571743.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-28a prokMSA_id:550464 FJ571710.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-59a prokMSA_id:550971 FJ571741.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-26a prokMSA_id:552304 EU420678.1 Archaeal and Kao-Mei Wetland clone KM07-Aa-9 prokMSA_id:552429 FJ718932.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 44 prokMSA_id:552540 FJ718984.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL water Homestake Mine clone 117 prokMSA_id:553895 EU420709.1 Archaeal and Kao-Mei Wetland clone KM07-Fa-1-2 prokMSA_id:554308 FJ718977.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL water Homestake Mine clone 037 prokMSA_id:555921 FJ487472.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A110 prokMSA_id:556044 FJ571797.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-82a prokMSA_id:556252 FJ571777.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-62a prokMSA_id:556610 FJ571795.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-80a prokMSA_id:556697 FJ571729.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-14a prokMSA_id:557135 FJ571755.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-40a prokMSA_id:557263 FJ487523.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_3_4_A1 prokMSA_id:557293 FJ571805.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-2a prokMSA_id:557674 FJ571677.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-26a prokMSA_id:558632 FJ718913.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 22 prokMSA_id:558820 FJ718928.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 3 prokMSA_id:559054 FJ571952.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-57a prokMSA_id:559394 FJ487483.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A109 prokMSA_id:559668 EU420688.1 Archaeal and Kao-Mei Wetland clone KM07-Ca-6 prokMSA_id:559961 FJ571775.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-60a prokMSA_id:560128 FJ487482.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A106 prokMSA_id:560250 FJ571739.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-24a prokMSA_id:560436 FJ487477.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A44 prokMSA_id:561375 FJ571956.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-61a prokMSA_id:561569 FJ571969.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-74a prokMSA_id:561605 FJ718967.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL water Homestake Mine clone 023 prokMSA_id:562062 FJ718943.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 56 prokMSA_id:562116 FJ571796.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-81a prokMSA_id:562242 FJ718966.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 98 prokMSA_id:562880 FJ487492.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A38 prokMSA_id:562998 FJ571896.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-1a prokMSA_id:563025 FJ571958.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-63a prokMSA_id:563700 FJ571733.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-18a prokMSA_id:563720 FJ718921.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 32 prokMSA_id:563735 FJ571942.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-47a prokMSA_id:564134 FJ718916.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 26 prokMSA_id:564460 FJ571801.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-86a prokMSA_id:564533 FJ571928.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-33a prokMSA_id:564808 FJ718936.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 4 prokMSA_id:565276 FJ487489.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A11 prokMSA_id:565997 FJ571698.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-47a prokMSA_id:566037 FJ571922.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-27a prokMSA_id:566182 FJ571719.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-4a prokMSA_id:566215 FJ571781.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-66a prokMSA_id:566350 EU420704.1 Archaeal and Kao-Mei Wetland clone KM07-Fa-1 prokMSA_id:566542 FJ571898.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S26; grey mud; 3000 depth clone S26-3a prokMSA_id:566872 FJ571688.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-37a prokMSA_id:567167 FJ571656.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-5a prokMSA_id:567320 FJ571709.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-58a prokMSA_id:568301 FJ571705.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-54a prokMSA_id:568568 FJ718924.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 36 prokMSA_id:568724 EU420679.1 Archaeal and Kao-Mei Wetland clone KM07-Aa-15 prokMSA_id:568933 FJ571745.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-30a prokMSA_id:569176 FJ571774.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-59a prokMSA_id:569278 FJ718965.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 95 prokMSA_id:569440 FJ571716.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-1a prokMSA_id:569828 FJ571791.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-76a prokMSA_id:569986 FJ718980.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL water Homestake Mine clone 055 prokMSA_id:570380 FJ718920.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 31 prokMSA_id:571312 FJ718919.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 2 prokMSA_id:572451 FJ571784.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-69a prokMSA_id:572469 FJ571884.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment S16; brown mud; 3800 depth clone S16-81a prokMSA_id:572853 FJ487484.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_H2O_A17 prokMSA_id:572875 FJ571749.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-34a prokMSA_id:573393 FJ571800.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-85a prokMSA_id:573586 FJ487527.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediments or overlying water clone SPG11_3_4_A16 prokMSA_id:573877 FJ718981.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL water Homestake Mine clone 057 prokMSA_id:574260 FJ718950.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 65 prokMSA_id:575025 FJ571792.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-77a prokMSA_id:575068 FJ571657.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-6a prokMSA_id:575978 FJ571763.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-48a prokMSA_id:575986 FJ718911.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 19 prokMSA_id:576193 FJ571793.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment R15; grey clay; 175 depth clone R15-78a prokMSA_id:576288 FJ718958.1 Survey Microbial Deep Underground Science and Engineering Laboratory (DUSEL) South Dakota DUSEL soil Homestake Mine clone 79 prokMSA_id:588820 GU137368.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 30m source clone PNG_TB_4B30H1_A002 1.2.11.1.1.3.2 s__Nitrosopumilus maritimus 3 seqs 1.2.11.1.1.3.2.21 OTU 3 seqs prokMSA_id:140624 DQ085097.1 Isolation autotrophic ammonia-oxidizing marine tropical seawater tank substratum Seattle Aquarium isolate SCM1Candidatus Nitrosopumilus maritimus str. SCM1 prokMSA_id:238720 NC_010085.1 Nitrosopumilus maritimus str. SCM1 prokMSA_id:247303 CP000866.1 Nitrosopumilus maritimus str. SCM1 1.2.11.1.1.3.3 s__pIVWA5 111 seqs 1.2.11.1.1.3.3.22 OTU 111 seqs prokMSA_id:1093 U78199.1 marine planktonic clone SB95-57 prokMSA_id:1102 AB019726.1 hydrothermal vent clone pIVWA108 prokMSA_id:1103 AB019727.1 hydrothermal vent clone pIVWA1 prokMSA_id:1104 AB019728.1 hydrothermal vent clone pIVWA5 prokMSA_id:1105 AB019729.1 hydrothermal vent clone pIVWA11 prokMSA_id:1106 AB019730.1 hydrothermal vent clone pIVWA2 prokMSA_id:1107 AB019731.1 hydrothermal vent clone pIVWA3 prokMSA_id:34469 AJ347777.2 brine-seawater interface clone ST-12K2A archaeal prokMSA_id:104582 AY316120.1 mesopelagic seawater clone DeepAnt-EC39 prokMSA_id:108918 AB193956.1 deep-sea vent clone MaSc-NEA01 prokMSA_id:108920 AB193957.1 deep-sea vent clone MT793-NA02 prokMSA_id:108922 AB193959.1 deep-sea vent clone MT793-NA04 prokMSA_id:108923 AB193960.1 deep-sea vent clone Ma-NA01 prokMSA_id:108928 AB193964.1 deep-sea vent clone SSM263-NA01 prokMSA_id:108929 AB193965.1 deep-sea vent clone Scd-NEA02 prokMSA_id:108933 AB193969.1 deep-sea vent clone SSM263-NA06 prokMSA_id:108934 AB193970.1 deep-sea vent clone SSM263-NA07 prokMSA_id:108935 AB193971.1 deep-sea vent clone MaSc-NEA03 prokMSA_id:108938 AB193973.1 deep-sea vent clone SSM264-NA02 prokMSA_id:108940 AB193975.1 deep-sea vent clone SSM264-NA04 prokMSA_id:108944 AB193979.1 deep-sea vent clone SSM263-EA01 prokMSA_id:108946 AB193981.1 deep-sea vent clone SSM263-EA03 prokMSA_id:108947 AB193982.1 deep-sea vent clone SSM263-EA04 prokMSA_id:108948 AB193983.1 deep-sea vent clone SSM263-EA05 prokMSA_id:108949 AB193984.1 deep-sea vent clone Scd-EA prokMSA_id:108952 AB193987.1 deep-sea vent clone SSM263-EA09 prokMSA_id:108957 AB193992.1 deep-sea vent clone SSM264-EA01 prokMSA_id:108958 AB193993.1 deep-sea vent clone SSM264-EA02 prokMSA_id:108961 AB193996.1 deep-sea vent clone SSM264-EA05 prokMSA_id:108964 AB193999.1 deep-sea vent clone Sd-EA03 prokMSA_id:108966 AB194002.1 deep-sea vent clone Sd-EA06 prokMSA_id:108998 AB194004.1 deep-sea vent clone Sd-EA07 prokMSA_id:109253 AB193967.2 deep-sea vent clone Scd-NA prokMSA_id:109255 AB193972.2 deep-sea vent clone Scd-NEA01 prokMSA_id:109256 AB193974.2 deep-sea vent clone MaScd-NEA prokMSA_id:109498 AY856356.1 2652m. clone CTD005-37A prokMSA_id:110734 AY856355.1 2652m. clone CTD005-45A prokMSA_id:145064 DQ300518.1 microbial ocean's interior amplicon single fosmid library d 500m depth HOT station ALOHA 22.45 N 158 deg. W clone HF500_34D06 prokMSA_id:145193 DQ300533.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_018I15 prokMSA_id:145283 DQ300524.1 microbial ocean's interior amplicon single fosmid library d 500m depth HOT station ALOHA 22.45 N 158 deg. W clone HF500_73E11 prokMSA_id:145307 DQ300543.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_039M09 prokMSA_id:145433 DQ300540.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_033N23 prokMSA_id:145451 DQ300525.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_039F23 prokMSA_id:145678 DQ300523.1 microbial ocean's interior amplicon single fosmid library d 500m depth HOT station ALOHA 22.45 N 158 deg. W clone HF500_61D01 prokMSA_id:145760 DQ300531.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_010J17 prokMSA_id:145936 DQ300529.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_007L19 prokMSA_id:145983 DQ300521.1 microbial ocean's interior amplicon single fosmid library d 500m depth HOT station ALOHA 22.45 N 158 deg. W clone HF500_55H11 prokMSA_id:146090 DQ300535.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_019L17 prokMSA_id:146110 DQ300520.1 microbial ocean's interior amplicon single fosmid library d 500m depth HOT station ALOHA 22.45 N 158 deg. W clone HF500_41A06 prokMSA_id:146196 DQ300537.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_030H02 prokMSA_id:146597 DQ300536.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_020G18 prokMSA_id:146826 DQ300515.1 microbial ocean's interior amplicon single fosmid library d 500m depth HOT station ALOHA 22.45 N 158 deg. W clone HF500_20H12 prokMSA_id:147034 DQ300534.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_018L23 prokMSA_id:147206 DQ300508.1 microbial ocean's interior amplicon single fosmid library d 200m depth HOT station ALOHA 22.45 N 158 deg. W clone HF200_21B01 prokMSA_id:147726 DQ300530.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_009C19 prokMSA_id:147821 DQ300516.1 microbial ocean's interior amplicon single fosmid library d 500m depth HOT station ALOHA 22.45 N 158 deg. W clone HF500_25E03 prokMSA_id:147873 DQ300542.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_036O19 prokMSA_id:148166 DQ300526.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_039G10 prokMSA_id:148573 DQ300511.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_3N10 prokMSA_id:148640 DQ300532.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_015N17 prokMSA_id:148729 DQ300509.1 microbial ocean's interior amplicon single fosmid library d 200m depth HOT station ALOHA 22.45 N 158 deg. W clone HF200_44H08 prokMSA_id:148893 DQ300539.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_032O01 prokMSA_id:149059 DQ300522.1 microbial ocean's interior amplicon single fosmid library d 500m depth HOT station ALOHA 22.45 N 158 deg. W clone HF500_60D02 prokMSA_id:149098 DQ300513.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_7H13 prokMSA_id:149215 DQ300510.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_2C07 prokMSA_id:149331 DQ300517.1 microbial ocean's interior amplicon single fosmid library d 500m depth HOT station ALOHA 22.45 N 158 deg. W clone HF500_25H11 prokMSA_id:149517 DQ300528.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_046D20 prokMSA_id:149542 DQ300512.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_48N12 prokMSA_id:149616 DQ300541.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_036I18 prokMSA_id:150450 DQ300514.1 microbial ocean's interior amplicon single fosmid library d 500m depth HOT station ALOHA 22.45 N 158 deg. W clone HF500_14H05 prokMSA_id:160215 DQ465920.1 n 'Korarchaeota water 0.2 um-filtered (after 1.0 um-prefiltering) surrounding 9 degrees North East Pacific Rise deep-sea hydrothermal vent Tica. This was obtained Dec 7 2002 Elevator 3 while on R/V Atlantis and DSV Alvin cruise -07 Leg 26 clone TFA4 prokMSA_id:239932 EF597717.1 Metagenomics deep mediterranean warm bathypelagic habitat 3010m depth Ionian Km3 Station Mediterranean Sea clone KM3-86-C1 prokMSA_id:252884 EF645850.1 Potential interactions particle- anammox and archaeal partners namibian Namibian upwelling system clone N67a_76 prokMSA_id:254406 EF597707.1 Metagenomics deep mediterranean warm bathypelagic habitat 3010m depth Ionian Km3 Station Mediterranean Sea clone KM3-47-D6 prokMSA_id:258060 EF597704.1 Metagenomics deep mediterranean warm bathypelagic habitat 3010m depth Ionian Km3 Station Mediterranean Sea clone KM3-34-D9 prokMSA_id:280033 EU650252.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 300exp4 prokMSA_id:282527 EU650253.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 358exp4 prokMSA_id:282843 EU650239.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 050exp4 prokMSA_id:283079 EU650237.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 039exp4 prokMSA_id:283265 EU650267.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 247exp4 prokMSA_id:311162 AB461948.1 Microbial areas southern Mariana Trough hydrothermal fluids clone FnvA02 prokMSA_id:312409 FJ150810.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C 26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 018exp5 prokMSA_id:312450 EU686614.2 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 3010m deep Ionian Sea clone KM3-47-D6 prokMSA_id:315799 AB461952.1 Microbial areas southern Mariana Trough hydrothermal fluids clone PaswA02 prokMSA_id:317263 EU686646.1 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 1000m deep South Atlantic clone SAT1000-21-C11 prokMSA_id:318329 FJ150809.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C 26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 015exp5 prokMSA_id:323489 FJ150815.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C 26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 077exp5 prokMSA_id:324034 FJ150813.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C 26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 061exp5 prokMSA_id:325688 AB461950.1 Microbial areas southern Mariana Trough hydrothermal fluids clone Papm3A08 prokMSA_id:325885 FJ150818.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C 26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 087exp5 prokMSA_id:325937 FJ150806.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C 26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 104exp5 prokMSA_id:327123 FJ002868.1 ES 3 cruise RV Pelagia on 0.2um Sterivex filter depth 7155m water mass: Antarctic Bottom Water (AABW) 1.42 salinity: 3475 pot temperature: 0.70 degrees C 27.87 kg/m3 concentration: 222.40 apparent oxygen utilization: 121.40 umol/kg clone A3_75_A2-14 prokMSA_id:329000 AB461946.1 Microbial areas southern Mariana Trough hydrothermal fluids clone FaswA05 prokMSA_id:330416 EU686615.1 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 1000m deep South Atlantic clone SAT1000-23-F7 prokMSA_id:333829 FJ150801.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 075exp4 prokMSA_id:334361 FJ150796.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 053exp4 prokMSA_id:334812 FJ150827.1 ise RV Pelagia on 0.2um polycarbonate filter depth 2071m water mass: Iceland-Scotland Overf Water(ISOW) 2.57 salinity: 34.98 pot temperature: 2.42 degrees C 27.92 kg/m3 concentration: 292.3 apparent oxygen utilization: 36.10 umol/kg clone T1_35_A1-5 prokMSA_id:335642 EU686633.2 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 1000m deep Adriatic Sea clone AD1000-207-H3 prokMSA_id:336600 EU686624.1 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 1000m deep Adriatic Sea clone AD1000-202-A2 prokMSA_id:341551 EU686642.2 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 1000m deep South Atlantic clone SAT1000-49-D2 prokMSA_id:341815 EU686625.2 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 3010m deep Ionian Sea clone KM3-86-C1 prokMSA_id:343527 EU686623.2 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 1000m deep Adriatic Sea clone AD1000-56-E4 prokMSA_id:343790 FJ150797.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 061exp4 prokMSA_id:346826 FJ150817.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C 26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 079exp5 prokMSA_id:347857 FJ150820.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C 26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 091exp5 prokMSA_id:347913 EU686619.1 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 3010m deep Ionian Sea clone KM3-34-D9 prokMSA_id:349793 FJ150812.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C 26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 031exp5 prokMSA_id:349956 FJ150799.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 068exp4 prokMSA_id:352897 FJ150807.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C 26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 109exp5 prokMSA_id:354861 FJ150800.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 006exp4 prokMSA_id:560951 FJ526997.1 Microbial life ridge flank crustal fluids deep-seawater near Baby Bare Seamount clone CTD005-34A 1.2.11.1.2 f__SAGMA-X 27 seqs 1.2.11.1.2.23 OTU 27 seqs prokMSA_id:18486 AB050208.1 deep subsurface clone SAGMA-D prokMSA_id:30678 AB050229.1 deep subsurface clone SAGMA-X prokMSA_id:31759 AB050227.1 deep subsurface clone SAGMA-V prokMSA_id:46479 AB050241.1 deep subsurface clone SAGMA-11 prokMSA_id:49412 AB050240.1 deep subsurface clone SAGMA-10 prokMSA_id:73503 AF389433.1 landfill groundwater clone SRS62DAR03 prokMSA_id:141382 AB243798.1 Archaeal anaerobic rice paddy soil clone NRP-G prokMSA_id:141481 AB243807.1 Archaeal anaerobic rice paddy soil clone NRP-P prokMSA_id:142269 AB243800.1 Archaeal anaerobic rice paddy soil clone NRP-I prokMSA_id:142459 AB243797.1 Archaeal anaerobic rice paddy soil clone NRP-F prokMSA_id:143324 AB243809.1 Archaeal anaerobic rice paddy soil clone NRP-R prokMSA_id:143749 DQ223189.1 subsurface water clone EV221H2111601H102 prokMSA_id:144208 AB243811.1 Archaeal anaerobic rice paddy soil clone NRP-T prokMSA_id:144908 DQ223191.1 subsurface water clone EV221H2111601H123 prokMSA_id:196059 EF032791.1 cyanobacterial mat in lava cave clone HAVOmat-arch05 prokMSA_id:209687 AB294263.1 Microbial structure deep coal seem groundwater stream clone SWA07 prokMSA_id:215305 AB294259.1 Microbial structure deep coal seem groundwater stream clone SWA03 prokMSA_id:215972 AB294262.1 Microbial structure deep coal seem groundwater stream clone SWA06 prokMSA_id:216453 AB294260.1 Microbial structure deep coal seem groundwater stream clone SWA04 prokMSA_id:241127 DQ837284.1 Archaeal and pristine National Park Spain Donana coastal aquifer clone 49S_2A_42 prokMSA_id:242513 EU309863.1 Archaea Dominate Ammonia-oxidizing Rhizosphere Freshwater Macrophyte rhizosphere Littorella uniflora Lake Hampen clone LAR_Cren_50 prokMSA_id:244585 EU309868.1 Archaea Dominate Ammonia-oxidizing Rhizosphere Freshwater Macrophyte rhizosphere Littorella uniflora Lake Hampen clone LAR_Cren_60 prokMSA_id:245794 DQ837281.1 Archaeal and pristine National Park Spain Donana coastal aquifer clone 49S1_1A_97 prokMSA_id:250851 EU309859.1 Archaea Dominate Ammonia-oxidizing Rhizosphere Freshwater Macrophyte rhizosphere Littorella uniflora Lake Hampen clone LAR_Cren_2 prokMSA_id:252136 EU309869.1 Archaea Dominate Ammonia-oxidizing Rhizosphere Freshwater Macrophyte rhizosphere Littorella uniflora Lake Hampen clone LAR_Cren_61 prokMSA_id:253497 EU309867.1 Archaea Dominate Ammonia-oxidizing Rhizosphere Freshwater Macrophyte rhizosphere Littorella uniflora Lake Hampen clone LAR_Cren_59 prokMSA_id:399264 FJ810535.1 Subsurface ecosystem resilience: Long-term attenuation subsurface contaminants supports elaborate eukaryotic food chain and dynamic microbial coal tar waste-contaminated groundwater clone JMYA31_AC31 1.2.11.2 o__Fhm2A82 9 seqs 1.2.11.2.24 OTU 9 seqs prokMSA_id:210856 AB293212.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Fhm2A82 prokMSA_id:552326 GU137392.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 300m source clone PNG_TB_4B300H1_A008 prokMSA_id:554809 GU137386.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 140m source clone PNG_TB_4B140H1_A031 prokMSA_id:562153 GU137393.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 300m source clone PNG_TB_4B300H1_A019 prokMSA_id:574629 GU137390.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 300m source clone PNG_TB_4B300H1_A002 prokMSA_id:580782 GU137359.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 7.5m source clone PNG_TB_4B7.5H1_A076 prokMSA_id:581017 GU137358.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 7.5m source clone PNG_TB_4B7.5H1_A150 prokMSA_id:581512 GU137363.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 7.5m source clone PNG_TB_4B7.5H1_A099 prokMSA_id:581577 GU137387.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 140m source clone PNG_TB_4B140H1_A038 1.2.11.3 o__Nitrosocaldales 5 seqs 1.2.11.3.1 f__Nitrosocaldaceae 5 seqs 1.2.11.3.1.1 g__Candidatus Nitrosocaldus 5 seqs 1.2.11.3.1.1.25 OTU 5 seqs prokMSA_id:39230 AF361211.1 hot spring clone SUBT-14 prokMSA_id:100311 AB113623.1 subsurface geothermal water clone HAuD-UA44 prokMSA_id:133478 AB201308.1 environmental DNA from subsurface geothermal water clone Fosmid clone No.45-H-12 prokMSA_id:264893 EU239960.1 Cultivation thermophilic ammonia oxidizing synthesizing crenarchaeol nitrifying enrichment Heart Lake 1 hot spring isolate HL72Candidatus Nitrosocaldus yellowstonii str. HL72 prokMSA_id:278703 EU635917.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 77 C clone SSE_L4_B03 1.2.11.4 o__Nitrososphaerales 260 seqs 1.2.11.4.1 f__Nitrososphaeraceae 260 seqs 1.2.11.4.1.1 g__Candidatus Nitrososphaera 260 seqs 1.2.11.4.1.1.1 Unclassified 29 seqs 1.2.11.4.1.1.1.26 OTU 29 seqs prokMSA_id:1140 U62812.1 soil clone SCA1150 prokMSA_id:1141 U62813.1 soil clone SCA1151 prokMSA_id:1144 U62816.1 soil clone SCA1166 prokMSA_id:1146 U62818.1 soil clone SCA1173 prokMSA_id:46609 AF227639.1 terrestrial plant root clone TRC132-9 prokMSA_id:76092 AJ535123.1 uranium mill tailings clone Gitt-GR-78 prokMSA_id:100998 AY522869.1 mesophilic soil agricultural field Hancock Agricultural Research Station clone MHS12 prokMSA_id:102085 AY522900.1 mesophilic soil agricultural field Arlington Agricultural Research Station clone MAS3 prokMSA_id:104677 AY522870.1 mesophilic soil agricultural field Hancock Agricultural Research Station clone MHS6 prokMSA_id:105113 AY522873.1 mesophilic soil turf field Walnut St. Research Fields UW Campus clone MGS13 prokMSA_id:105832 AY522890.1 mesophilic soil forest Picnic Point UW Campus Natural Areas clone MBS8 prokMSA_id:105984 AY522891.1 mesophilic soil forest Picnic Point UW Campus Natural Areas clone MBS4 prokMSA_id:106926 AY522897.1 mesophilic soil agricultural field Arlington Agricultural Research Station clone MAS10 prokMSA_id:107081 AY522898.1 mesophilic soil agricultural field Arlington Agricultural Research Station clone MAS9 prokMSA_id:141417 DQ278134.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone RotD-9500ia prokMSA_id:142021 DQ278136.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone RotD-9500iiia prokMSA_id:142573 DQ278137.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone RotD-9500iiib prokMSA_id:142748 DQ278135.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone RotD-9500ib prokMSA_id:235345 EU155997.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_6E prokMSA_id:236566 EU155998.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B4A prokMSA_id:237125 EU284615.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-G4 prokMSA_id:248490 EU284610.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-F1 prokMSA_id:248823 EU280230.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_6D7 prokMSA_id:250336 EU284619.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-H7 prokMSA_id:254140 EU284606.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-D7 prokMSA_id:256617 EU284609.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-E7 prokMSA_id:512943 FJ705104.1 Study prokaryotic selected niches Western Ghats India WCS sediment clone ACWCSP1B2 prokMSA_id:543049 FJ468482.1 Meter-scale mineral induced selection microbial on weathered pegmatitic granite feldspar minerals clone F78 prokMSA_id:553459 FJ468484.1 Meter-scale mineral induced selection microbial on weathered pegmatitic granite feldspar minerals clone F13 1.2.11.4.1.1.2 s__Candidatus Nitrososphaera gargensis 93 seqs 1.2.11.4.1.1.2.27 OTU 93 seqs prokMSA_id:1148 U62820.1 soil clone SCA11 prokMSA_id:25116 AB050233.1 deep subsurface clone SAGMA-2 prokMSA_id:47778 AB050228.1 deep subsurface clone SAGMA-W prokMSA_id:54107 AB050230.1 deep subsurface clone SAGMA-Y prokMSA_id:75056 AJ535120.1 uranium mill tailings clone Gitt-GR-39 prokMSA_id:76611 AJ535119.1 uranium mill tailings clone Gitt-GR-31 prokMSA_id:187407 EF032794.1 cyanobacterial mat in lava cave clone HAVOmat-arch08 prokMSA_id:196412 EF032793.1 cyanobacterial mat in lava cave clone HAVOmat-arch29 prokMSA_id:240076 EF562193.1 Subsurface microbial deep-granitic-fracture water colorado Henderson Molybdenum Mine clone 7025P4A94 prokMSA_id:242653 EF562189.1 Subsurface microbial deep-granitic-fracture water colorado Henderson Molybdenum Mine clone 7025P4A90 prokMSA_id:245272 EF562191.1 Subsurface microbial deep-granitic-fracture water colorado Henderson Molybdenum Mine clone 7025P4A92 prokMSA_id:246734 EF562195.1 Subsurface microbial deep-granitic-fracture water colorado Henderson Molybdenum Mine clone 7025P4A96 prokMSA_id:258217 EU281336.1 moderately thermophilic ammonia-oxidizing crenarchaeote enrichment on ammonia oxidizers Garga hot spring clone RHGA92E21c prokMSA_id:269821 EU281335.1 moderately thermophilic ammonia-oxidizing crenarchaeote enrichment on ammonia oxidizers Garga hot spring clone RHGA92E13c prokMSA_id:273213 EU281332.1 moderately thermophilic ammonia-oxidizing crenarchaeote enrichment on ammonia oxidizers Garga hot spring clone RHGA36c prokMSA_id:273873 EU281333.1 moderately thermophilic ammonia-oxidizing crenarchaeote enrichment on ammonia oxidizers Garga hot spring clone RHGA37c prokMSA_id:275030 EU281334.1 moderately thermophilic ammonia-oxidizing crenarchaeote enrichment on ammonia oxidizers Garga hot spring clone RHGA41c prokMSA_id:534239 AB541759.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_26 prokMSA_id:534409 AB541955.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_32 prokMSA_id:537017 AB541965.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_42 prokMSA_id:537558 AB541849.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_28 prokMSA_id:537947 AB541756.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_23 prokMSA_id:540461 AB541966.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_43 prokMSA_id:542948 AB541960.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_37 prokMSA_id:546040 AB541870.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_14 prokMSA_id:546287 AB541591.1 Changes archaeal structure during composting process cattle manure compost clone K08_2_18 prokMSA_id:546313 FJ784245.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1D07 prokMSA_id:546346 AB541850.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_29 prokMSA_id:547713 AB541617.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_26 prokMSA_id:547790 AB541589.1 Changes archaeal structure during composting process cattle manure compost clone K08_2_16 prokMSA_id:548059 AB541957.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_34 prokMSA_id:548222 AB541969.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_46 prokMSA_id:548602 AB541682.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_44 prokMSA_id:548665 AB541840.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_19 prokMSA_id:548787 AB541971.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_48 prokMSA_id:551654 AB541758.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_25 prokMSA_id:552218 AB541839.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_18 prokMSA_id:553119 AB541851.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_30 prokMSA_id:553527 AB541898.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_42 prokMSA_id:556615 AB541902.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_46 prokMSA_id:557190 AB541959.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_36 prokMSA_id:558214 AB541842.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_21 prokMSA_id:559568 AB541755.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_22 prokMSA_id:560391 AB541921.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_65 prokMSA_id:560447 AB541854.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_33 prokMSA_id:561907 AB541852.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_31 prokMSA_id:562775 AB541689.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_51 prokMSA_id:563736 AB541899.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_43 prokMSA_id:563974 AB541963.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_40 prokMSA_id:564022 AB541906.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_50 prokMSA_id:564501 FJ784311.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1D12 prokMSA_id:566358 AB541911.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_55 prokMSA_id:566601 FJ784246.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1E08 prokMSA_id:568458 AB541910.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_54 prokMSA_id:568586 AB541908.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_52 prokMSA_id:569852 AB541968.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_45 prokMSA_id:570599 AB541970.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_47 prokMSA_id:570923 AB541922.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_66 prokMSA_id:571309 AB541817.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_55 prokMSA_id:572345 FJ784247.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1E10 prokMSA_id:572404 AB541917.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_61 prokMSA_id:572567 AB541919.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_63 prokMSA_id:573767 AB541847.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_26 prokMSA_id:574466 AB541684.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_46 prokMSA_id:574877 AB541683.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_45 prokMSA_id:575926 AB541903.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_47 prokMSA_id:576943 AB541638.1 Changes archaeal structure during composting process cattle manure compost clone K08_21_19 prokMSA_id:577045 AB541686.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_48 prokMSA_id:577681 AB541754.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_21 prokMSA_id:578481 AB541692.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_54 prokMSA_id:579589 AB541757.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_24 prokMSA_id:579775 AB541845.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_24 prokMSA_id:580255 AB541907.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_51 prokMSA_id:582209 AB541691.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_53 prokMSA_id:582390 AB541732.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_38 prokMSA_id:582626 AB541954.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_31 prokMSA_id:582801 AB541967.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_44 prokMSA_id:583795 AB541918.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_62 prokMSA_id:584992 AB541855.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_34 prokMSA_id:585173 AB541909.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_53 prokMSA_id:585372 AB541964.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_41 prokMSA_id:587150 AB541897.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_41 prokMSA_id:588736 AB541814.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_52 prokMSA_id:589425 AB541733.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_39 prokMSA_id:590093 AB541752.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_19 prokMSA_id:590505 AB541912.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_56 prokMSA_id:590787 AB541688.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_50 prokMSA_id:591244 AB541841.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_20 prokMSA_id:592635 AB541848.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_27 prokMSA_id:593823 AB541838.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_17 prokMSA_id:593957 AB541856.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_35 prokMSA_id:593983 AB541687.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_49 prokMSA_id:594407 AB541914.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_58 1.2.11.4.1.1.3 s__SCA1145 82 seqs 1.2.11.4.1.1.3.28 OTU 82 seqs prokMSA_id:1139 U62811.1 soil clone SCA1145 prokMSA_id:1147 U62819.1 soil clone SCA1175 prokMSA_id:24479 AF227644.1 terrestrial plant root clone TRC23-38 prokMSA_id:26266 AF227637.1 terrestrial plant root clone TRC132-7 prokMSA_id:30247 AF227638.1 terrestrial plant root clone TRC132-8 prokMSA_id:32035 AB050221.1 deep subsurface clone SAGMA-P prokMSA_id:32329 AF227642.1 terrestrial plant root clone TRC23-30 prokMSA_id:39571 AF227643.1 terrestrial plant root clone TRC23-31 prokMSA_id:43271 AF227641.1 terrestrial plant root clone TRC23-28 prokMSA_id:51909 AF227636.1 terrestrial plant root clone TRC132-6 prokMSA_id:71074 AJ496176.1 soil clone cren34kb prokMSA_id:99736 AY522861.1 mesophilic soil turf field West Madison Agricultural Research Station clone MWS36 prokMSA_id:99896 AY522862.1 mesophilic soil turf field West Madison Agricultural Research Station clone MWS31 prokMSA_id:100210 AY522864.1 mesophilic soil turf field West Madison Agricultural Research Station clone MWS12 prokMSA_id:100367 AY522865.1 mesophilic soil agricultural field Hancock Agricultural Research Station clone MHS36 prokMSA_id:100679 AY522867.1 mesophilic soil agricultural field Hancock Agricultural Research Station clone MHS20 prokMSA_id:100837 AY522868.1 mesophilic soil agricultural field Hancock Agricultural Research Station clone MHS15 prokMSA_id:101258 AY522883.1 mesophilic soil prairie Curtis Prairie UW Arboretum clone MCS27 prokMSA_id:102080 AY522888.1 mesophilic soil forest Picnic Point UW Campus Natural Areas clone MBS20 prokMSA_id:102235 AY522889.1 mesophilic soil forest Picnic Point UW Campus Natural Areas clone MBS11 prokMSA_id:104384 AY487100.1 enrichment tomato rhizosphere clone TREC89-136 prokMSA_id:104533 AY487101.1 enrichment tomato rhizosphere clone TREC89-44 prokMSA_id:104689 AY487102.1 enrichment tomato rhizosphere clone TREC89-36 prokMSA_id:104842 AY487103.1 enrichment tomato rhizosphere clone TREC89-34 prokMSA_id:105281 AY522874.1 mesophilic soil turf field Walnut St. Research Fields UW Campus clone MGS6 prokMSA_id:105429 AY522875.1 mesophilic soil turf field Walnut St. Research Fields UW Campus clone MGS5 prokMSA_id:105583 AY522876.1 mesophilic soil turf field Walnut St. Research Fields UW Campus clone MGS4 prokMSA_id:105735 AY522877.1 mesophilic soil turf field Walnut St. Research Fields UW Campus clone MGS1 prokMSA_id:106139 AY522892.1 mesophilic soil forest Picnic Point UW Campus Natural Areas clone MBS2 prokMSA_id:106302 AY522893.1 mesophilic soil agricultural field Arlington Agricultural Research Station clone MAS46 prokMSA_id:106456 AY522894.1 mesophilic soil agricultural field Arlington Agricultural Research Station clone MAS20 prokMSA_id:106615 AY522895.1 mesophilic soil agricultural field Arlington Agricultural Research Station clone MAS18 prokMSA_id:107234 AY522899.1 mesophilic soil agricultural field Arlington Agricultural Research Station clone MAS5 prokMSA_id:141138 DQ278118.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone OdenA-100ii prokMSA_id:141882 DQ278123.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone RotB-135ii prokMSA_id:141933 DQ278117.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone OdenA-100iiia prokMSA_id:142041 DQ278125.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone OdenB-100iia prokMSA_id:143107 DQ278119.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone RotA-75iib prokMSA_id:143635 DQ278124.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone OdenB-100iib prokMSA_id:143675 DQ278116.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone RotA-75iia prokMSA_id:144185 DQ278122.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone RotB-75iia prokMSA_id:236819 EU284637.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSP-F5 prokMSA_id:240322 EF690623.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_68 prokMSA_id:241860 EU284612.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-F3 prokMSA_id:251606 EU284600.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-B5 prokMSA_id:252853 EU284611.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-F2 prokMSA_id:256858 EF690622.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_67 prokMSA_id:396480 FJ655668.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3D12 prokMSA_id:404761 FJ982757.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMPFLSS56m_5 prokMSA_id:412135 FJ982759.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMAFLSS56m_7 prokMSA_id:427048 FJ982761.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMPFLSS56m_6 prokMSA_id:509175 FJ790590.1 Hypolithic microbial niches -altitude arid quartz Tibet desert clone QA15 prokMSA_id:510051 FJ784243.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1F03 prokMSA_id:510335 FJ784300.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1A04 prokMSA_id:510739 FJ790535.1 Chasmolithic microbial niches -altitude arid tuff Tibet desert clone VA52 prokMSA_id:536730 FJ784301.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1H10 prokMSA_id:537227 FJ790592.1 Hypolithic microbial niches -altitude arid quartz Tibet desert clone QA22 prokMSA_id:540349 FJ784308.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1G08 prokMSA_id:543169 AB541619.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_28 prokMSA_id:543266 FJ790518.1 Chasmolithic microbial niches -altitude arid tuff Tibet desert clone VA35 prokMSA_id:543624 FJ784242.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1A03 prokMSA_id:546185 FJ790589.1 Hypolithic microbial niches -altitude arid quartz Tibet desert clone QA14 prokMSA_id:547133 FJ790530.1 Chasmolithic microbial niches -altitude arid tuff Tibet desert clone VA37 prokMSA_id:549951 FJ790597.1 Hypolithic microbial niches -altitude arid quartz Tibet desert clone QA47 prokMSA_id:551491 FJ790588.1 Hypolithic microbial niches -altitude arid quartz Tibet desert clone QA13 prokMSA_id:555717 AB541762.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_29 prokMSA_id:555756 FJ790598.1 Hypolithic microbial niches -altitude arid quartz Tibet desert clone QA48 prokMSA_id:558522 FJ790591.1 Hypolithic microbial niches -altitude arid quartz Tibet desert clone QA21 prokMSA_id:561787 FJ468481.1 Meter-scale mineral induced selection microbial on weathered pegmatitic granite muscovite minerals clone M72 prokMSA_id:563233 FJ790525.1 Chasmolithic microbial niches -altitude arid tuff Tibet desert clone VA61 prokMSA_id:565364 FJ790534.1 Chasmolithic microbial niches -altitude arid tuff Tibet desert clone VA39 prokMSA_id:566960 FJ790522.1 Chasmolithic microbial niches -altitude arid tuff Tibet desert clone VA17 prokMSA_id:567177 FJ790528.1 Chasmolithic microbial niches -altitude arid tuff Tibet desert clone VA32 prokMSA_id:569392 FJ790532.1 Chasmolithic microbial niches -altitude arid tuff Tibet desert clone VA99 prokMSA_id:572147 FJ790531.1 Chasmolithic microbial niches -altitude arid tuff Tibet desert clone VA88 prokMSA_id:572813 AB541819.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_57 prokMSA_id:573021 FJ784303.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1A09 prokMSA_id:574289 FJ784244.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1C09 prokMSA_id:575350 FJ468480.1 Meter-scale mineral induced selection microbial on weathered pegmatitic granite quartz minerals clone Q16 prokMSA_id:575641 AB541694.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_56 prokMSA_id:589781 AB541815.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_53 prokMSA_id:593344 AB541693.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_55 1.2.11.4.1.1.4 s__SCA1170 56 seqs 1.2.11.4.1.1.4.29 OTU 56 seqs prokMSA_id:1111 U59968.1 freshwater sediment clone pGrfA4 prokMSA_id:1142 U62814.1 soil clone SCA1154 prokMSA_id:1143 U62815.1 soil clone SCA1158 prokMSA_id:1145 U62817.1 soil clone SCA1170 prokMSA_id:41594 AF227640.1 terrestrial plant root clone TRC23-10 prokMSA_id:45484 AF227635.1 terrestrial plant root clone TRC132-3 prokMSA_id:74966 AJ535117.1 uranium mill tailings clone Gitt-GR-5 prokMSA_id:75314 AJ535122.1 uranium mill tailings clone Gitt-GR-74 prokMSA_id:76642 AJ535121.1 uranium mill tailings clone Gitt-GR-47 prokMSA_id:83832 AY278106.1 group 1.1b clone 54D9 prokMSA_id:100051 AY522863.1 mesophilic soil turf field West Madison Agricultural Research Station clone MWS22 prokMSA_id:100523 AY522866.1 mesophilic soil agricultural field Hancock Agricultural Research Station clone MHS29 prokMSA_id:100781 AY522880.1 mesophilic soil prairie Curtis Prairie UW Arboretum clone MCS41 prokMSA_id:101071 AJ627422.1 soil clone prokMSA_id:101592 AY522885.1 mesophilic soil prairie Curtis Prairie UW Arboretum clone MCS7 prokMSA_id:101770 AY522886.1 mesophilic soil prairie Curtis Prairie UW Arboretum clone MCS4 prokMSA_id:102378 AY522902.1 mesophilic soil turf field West Madison Agricultural Research Station clone MWS38 prokMSA_id:104825 AY522871.1 mesophilic soil agricultural field Hancock Agricultural Research Station clone MHS2 prokMSA_id:106039 AY522879.1 mesophilic soil prairie Curtis Prairie UW Arboretum clone MCS46 prokMSA_id:141739 DQ278130.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone OdenC-9500iia prokMSA_id:141896 DQ278129.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone OdenC-100iib prokMSA_id:142373 DQ278131.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone OdenC-9500iib prokMSA_id:143827 DQ278128.1 Crenarchaeal assembly and microdiversity soils two sites deglaciation soil clone OdenC-100iia prokMSA_id:211536 AB294268.1 Microbial structure deep coal seem groundwater stream clone SWA12 prokMSA_id:237446 EU309866.1 Archaea Dominate Ammonia-oxidizing Rhizosphere Freshwater Macrophyte rhizosphere Littorella uniflora Lake Hampen clone LAR_Cren_57 prokMSA_id:246419 EU309862.1 Archaea Dominate Ammonia-oxidizing Rhizosphere Freshwater Macrophyte rhizosphere Littorella uniflora Lake Hampen clone LAR_Cren_30 prokMSA_id:431327 FJ982756.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMPFLSS56m_8 prokMSA_id:509461 FJ784268.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1B01 prokMSA_id:511141 FJ784285.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1D09 prokMSA_id:513232 FJ784248.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1A01 prokMSA_id:513911 FJ784298.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1D04 prokMSA_id:513954 FJ784259.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1B06 prokMSA_id:532600 FJ784283.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1B05 prokMSA_id:533409 FJ784267.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1F10 prokMSA_id:538953 FJ784297.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1E11 prokMSA_id:540828 FJ784284.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1D08 prokMSA_id:546156 FJ784281.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1H06 prokMSA_id:547180 FJ784258.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1B04 prokMSA_id:549164 FJ784262.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1B02 prokMSA_id:549718 FJ784294.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1F06 prokMSA_id:550237 FJ784260.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1D10 prokMSA_id:552185 FJ784261.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1G01 prokMSA_id:555541 FJ784252.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1A02 prokMSA_id:556561 FJ784271.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1F02 prokMSA_id:556706 FJ784299.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1G02 prokMSA_id:558392 FJ784263.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1C01 prokMSA_id:562344 FJ784256.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1F11 prokMSA_id:563299 FJ784293.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1D02 prokMSA_id:563996 FJ784272.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1A08 prokMSA_id:564074 FJ784286.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1H07 prokMSA_id:565520 FJ784278.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1B03 prokMSA_id:565658 FJ784279.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1G05 prokMSA_id:566228 FJ784249.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1A06 prokMSA_id:568951 FJ784269.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1E03 prokMSA_id:569565 FJ784275.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1H08 prokMSA_id:575024 FJ784274.1 archaeal and population drained saline former lake Texcoco (Mexico) alkaline soil clone TX1E04 1.2.11.5 o__SWA11 3 seqs 1.2.11.5.30 OTU 3 seqs prokMSA_id:197533 EF032792.1 cyanobacterial mat in lava cave clone HAVOmat-arch15 prokMSA_id:204290 AB294267.1 Microbial structure deep coal seem groundwater stream clone SWA11 prokMSA_id:583985 GU137362.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 7.5m source clone PNG_TB_4B7.5H1_A004 1.2.12 c__Thermoprotei 460 seqs 1.2.12.1 Unclassified 18 seqs 1.2.12.1.31 OTU 18 seqs prokMSA_id:824 L25300.1 hot spring clone pJP33 prokMSA_id:836 U63338.1 hot spring clone pSL96 prokMSA_id:839 U63342.1 hot spring clone pSL50 prokMSA_id:111652 AY882767.2 hot spring clone SK213 prokMSA_id:141073 DQ243775.1 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Sylvan Spring clone YNP_SSp_A51 prokMSA_id:142364 DQ243754.2 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Obsidian Pool clone YNP_ObP_A25 prokMSA_id:144850 DQ243755.1 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Obsidian Pool clone YNP_ObP_A31 prokMSA_id:179805 EF100625.1 Prokaryotic Populations Heated Arsenic-Rich Sediments Shal Submarine Hydrothermal System Ambitle Island Papua New Guinea vent 4 transect 2.5 m source clone PNG_TB_4A2.5H2_A57 prokMSA_id:183968 EF100634.1 Prokaryotic Populations Heated Arsenic-Rich Sediments Shal Submarine Hydrothermal System Ambitle Island Papua New Guinea vent 4 transect 2.5 m source clone PNG_TB_4A2.5H4_A55 prokMSA_id:223945 EF552404.1 Fervidococcus fontis str. 940 prokMSA_id:278952 EU635923.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 87 C clone SSW_L4_H06 prokMSA_id:279250 EU635924.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 77 C clone SSE_L4_G03 prokMSA_id:311539 EU924230.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC4_L5_C10 prokMSA_id:314761 EU924234.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC4_L5_G11 prokMSA_id:337219 EU924233.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC3_L5_F12 prokMSA_id:522457 GU135487.1 archaeal Lake Pavin sediment (11 cm) clone Pav-sed-507 prokMSA_id:549322 AB479404.1 Isolation Methanomicrobiales methanogen mesophilic methanogenic granular sludge clone SMS-sludge-13 prokMSA_id:564789 GU137395.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 300m source clone PNG_TB_4B300H1_A064 1.2.12.2 o__Desulfurococcales 111 seqs 1.2.12.2.1 Unclassified 1 seq 1.2.12.2.1.32 OTU 1 seq prokMSA_id:878 X99555.1 Pyrolobus fumarii str. 1A 1.2.12.2.2 f__ 49 seqs 1.2.12.2.2.1 Unclassified 18 seqs 1.2.12.2.2.1.33 OTU 18 seqs prokMSA_id:78319 AB087499.1 Caldisphaera lagunensis str. IC-154 prokMSA_id:145479 DQ333311.1 Geochemical Controls on Microbial Population Rainbow and Joseph's Coat Hot Springs Yellowstone National Park hot spring clone SK400 prokMSA_id:161742 DQ833935.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK574 prokMSA_id:165072 DQ833961.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK600 prokMSA_id:166684 DQ833937.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK576 prokMSA_id:166962 DQ833962.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK601 prokMSA_id:168067 DQ833984.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK623 prokMSA_id:169114 DQ834014.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK653 prokMSA_id:169686 DQ833958.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK597 prokMSA_id:171570 DQ833936.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK575 prokMSA_id:172100 DQ833963.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK602 prokMSA_id:172631 DQ833957.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK596 prokMSA_id:173770 DQ833959.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK598 prokMSA_id:177017 EF057392.1 Caldisphaera dracosis str. 18U65 prokMSA_id:181991 EF156484.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY119 prokMSA_id:189206 EF156482.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY117 prokMSA_id:197618 EF156540.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY175 prokMSA_id:550943 FJ797316.1 Planktonic and bottom-dwelled microbial -temperature sulfuric ponds Tatung Volcano area northern Taiwan acidic hot spring sediment clone HS4sa_04 1.2.12.2.2.2 g__Caldococcus 31 seqs 1.2.12.2.2.2.34 OTU 31 seqs prokMSA_id:910 D85038.1 Caldococcus noboribetus str. NC12 prokMSA_id:112174 AY882744.2 hot spring clone SK189 prokMSA_id:144013 DQ243773.1 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Sylvan Spring clone YNP_SSp_A24 prokMSA_id:164566 DQ833883.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK522 prokMSA_id:164925 DQ833873.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK512 prokMSA_id:165543 DQ833822.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK460 prokMSA_id:165940 DQ833844.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK482 prokMSA_id:167157 DQ833884.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK523 prokMSA_id:167305 DQ833831.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK469 prokMSA_id:168179 DQ833920.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK559 prokMSA_id:168930 DQ833865.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK504 prokMSA_id:169402 DQ833823.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK461 prokMSA_id:169923 DQ833886.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK525 prokMSA_id:169926 DQ833821.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK459 prokMSA_id:170476 DQ833885.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK524 prokMSA_id:171005 DQ833832.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK470 prokMSA_id:172917 DQ833866.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK505 prokMSA_id:175415 EF156565.1 Microbial Population Norris Geyser Basin Yellowstone National Park Koz Spring clone KOZ124 prokMSA_id:177074 DQ924795.1 Microbial Population Norris Geyser Basin Yellowstone National Park Monarch Hot Spring clone BW255 prokMSA_id:179370 EF057391.1 Acidococcus sulfurreducens str. 18D70 prokMSA_id:179483 EF156567.1 Microbial Population Norris Geyser Basin Yellowstone National Park Koz Spring clone KOZ126 prokMSA_id:180104 DQ924700.1 Microbial Population Norris Geyser Basin Yellowstone National Park Cistern Spring/Monarch Hot Spring clone BW159 prokMSA_id:184439 DQ924796.1 Microbial Population Norris Geyser Basin Yellowstone National Park Monarch Hot Spring clone BW256 prokMSA_id:187068 EF156564.1 Microbial Population Norris Geyser Basin Yellowstone National Park Koz Spring clone KOZ123 prokMSA_id:187117 EF156579.1 Microbial Population Norris Geyser Basin Yellowstone National Park Koz Spring clone KOZ139 prokMSA_id:190172 EF156566.1 Microbial Population Norris Geyser Basin Yellowstone National Park Koz Spring clone KOZ125 prokMSA_id:190398 EF156537.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY172 prokMSA_id:193437 DQ924794.1 Microbial Population Norris Geyser Basin Yellowstone National Park Monarch Hot Spring clone BW254 prokMSA_id:195366 DQ924792.1 Microbial Population Norris Geyser Basin Yellowstone National Park Monarch Hot Spring clone BW252 prokMSA_id:197895 DQ924793.1 Microbial Population Norris Geyser Basin Yellowstone National Park Monarch Hot Spring clone BW253 prokMSA_id:244608 AY350586.2 Acidilobus saccharovorans str. 345-15 1.2.12.2.3 f__Desulfurococcaceae 55 seqs 1.2.12.2.3.1 Unclassified 22 seqs 1.2.12.2.3.1.35 OTU 22 seqs prokMSA_id:923 X99556.1 Thermosphaera aggregans str. M11TL prokMSA_id:936 X98064.1 Sulfophobococcus zilligii prokMSA_id:141000 DQ228604.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH1a33 prokMSA_id:141098 DQ228530.1 Predominance deeply-branching Archaea growth nascent hydrothermal chimney clone F99a13 prokMSA_id:141374 DQ228591.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH2a62 prokMSA_id:143052 DQ243731.1 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Bison Pool clone YNP_BP_A49 prokMSA_id:143339 DQ228585.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone OUTa34 prokMSA_id:143586 DQ243730.2 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Bison Pool clone YNP_BP_A32 prokMSA_id:143597 DQ228606.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH3a13 prokMSA_id:144187 DQ228603.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH1a13 prokMSA_id:144552 DQ243732.2 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Bison Pool clone YNP_BP_A60 prokMSA_id:144945 DQ228602.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH1a34 prokMSA_id:201339 DQ243779.2 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Sylvan Spring clone YNP_SSp_A84 prokMSA_id:202049 EF088324.1 Geochemical Templates Growth Media Design: Trace Element Effects on Culturing Thermophiles enrichment clone SS1 Clone Group 1 prokMSA_id:208794 AB293240.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Pcsc3A01 prokMSA_id:212695 AB293213.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Fhm2A86 prokMSA_id:214562 AB293243.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Pcsc3A31 prokMSA_id:215666 AB293239.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Pcsc2A38 prokMSA_id:278081 EU635920.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 77 C clone SSE_L4_H05 prokMSA_id:279228 EU635921.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 87 C clone SSW_L4_A01 prokMSA_id:318531 AB462559.1 Microbial production and energy source hyperthermophilic prokaryotes geothermal hot spring pool clone DDP-A02 prokMSA_id:533888 GQ292555.1 Staphylothermus sp. str. 1633 1.2.12.2.3.2 g__Aeropyrum 16 seqs 1.2.12.2.3.2.1 Unclassified 5 seqs 1.2.12.2.3.2.1.36 OTU 5 seqs prokMSA_id:911 AB007312.1 hot water habitat clone pOWA114 prokMSA_id:72647 AF361213.1 hot spring clone SUBT-9 prokMSA_id:141263 DQ228599.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH2a67 prokMSA_id:141544 DQ228598.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH2a36 prokMSA_id:157150 DQ490017.1 Microbial Great Boiling Spring sediment hot spring; temperature 80 C clone GBS_L3_B06 1.2.12.2.3.2.2 s__Aeropyrum pernix 11 seqs 1.2.12.2.3.2.2.37 OTU 11 seqs prokMSA_id:913 AB019552.2 Aeropyrum pernix str. OH2 prokMSA_id:53481 AB078016.1 Aeropyrum pernix str. OH3 prokMSA_id:54532 AB078015.1 Aeropyrum pernix str. OH1 prokMSA_id:159720 AB263905.1 Aeropyrum pernix str. TA2 prokMSA_id:159730 AB263910.1 Aeropyrum pernix str. TA7 prokMSA_id:159790 AB263906.1 Aeropyrum pernix str. TA3 prokMSA_id:159801 AB263907.1 Aeropyrum pernix str. TA4 prokMSA_id:159837 AB263909.1 Aeropyrum pernix str. TA6 prokMSA_id:160735 AB263911.1 Aeropyrum pernix str. YK3 prokMSA_id:161017 AB263908.1 Aeropyrum pernix str. TA5 prokMSA_id:161122 AB263904.1 Aeropyrum pernix str. TA1 1.2.12.2.3.3 g__Desulfurococcus 5 seqs 1.2.12.2.3.3.38 OTU 5 seqs prokMSA_id:930 M36474.1 Desulfurococcus mobilis prokMSA_id:932 X99561.1 Desulfurococcus sp. str.OC11 prokMSA_id:23984 AF411230.1 Desulfurococcus sp. str. SEA prokMSA_id:237710 EU167539.2 Desulfurococcus kamchatkensis str. 1221n prokMSA_id:523401 CP001140.1 Desulfurococcus kamchatkensis str. 1221n 1.2.12.2.3.4 g__Ignicoccus 6 seqs 1.2.12.2.3.4.1 Unclassified 2 seqs 1.2.12.2.3.4.1.39 OTU 2 seqs prokMSA_id:921 X99562.1 Ignicoccus islandicus str. Ko18 prokMSA_id:16514 AJ271794.1 Ignicoccus pacificus str. LPC33 1.2.12.2.3.4.2 s__Ignicoccus hospitalis 4 seqs 1.2.12.2.3.4.2.40 OTU 4 seqs prokMSA_id:66762 AJ318042.1 Ignicoccus sp. str. Kin4-I prokMSA_id:252944 NC_009776.1 Ignicoccus hospitalis str. KIN4/I prokMSA_id:253612 CP000816.1 Ignicoccus hospitalis str. KIN4/I prokMSA_id:587211 NR_028955.1 Ignicoccus hospitalis str. Kin4-I; DSM 18386 1.2.12.2.3.5 g__Ignisphaera 3 seqs 1.2.12.2.3.5.41 OTU 3 seqs prokMSA_id:151069 DQ060321.1 Ignisphaera aggregans str. AQ1.S1 prokMSA_id:151608 DQ060322.1 Ignisphaera sp. str. Tok10A.S1 prokMSA_id:153493 DQ060323.1 Ignisphaera sp. str. Tok37.S1 1.2.12.2.3.6 g__Staphylothermus 3 seqs 1.2.12.2.3.6.42 OTU 3 seqs prokMSA_id:916 X99560.1 Staphylothermus marinus prokMSA_id:920 AJ012645.2 Staphylothermus achaiicus prokMSA_id:559833 NR_028877.1 Staphylothermus hellenicus str. P8; DSM 12710 1.2.12.2.4 f__Pyrodictiaceae 6 seqs 1.2.12.2.4.43 OTU 6 seqs prokMSA_id:879 M21087.1 Pyrodictium occultum prokMSA_id:83399 AY216935.1 Desulfurococcales isolate str. 121 prokMSA_id:159324 DQ492260.1 Geogemma indica str. 296 prokMSA_id:174557 CP000493.1 Hyperthermus butylicus str. DSM 5456 prokMSA_id:186470 NC_008818.1 Hyperthermus butylicus str. DSM 5456 prokMSA_id:570515 NR_025933.1 Pyrodictium occultum str. PL-19; DSM 2709 1.2.12.3 o__Sulfolobales 231 seqs 1.2.12.3.1 f__Sulfolobaceae 231 seqs 1.2.12.3.1.1 Unclassified 2 seqs 1.2.12.3.1.1.44 OTU 2 seqs prokMSA_id:522630 GU553006.1 Sulfolobus sp. str. MV5-C4 prokMSA_id:526098 GU553005.1 Sulfolobus sp. str. AHU-3F 1.2.12.3.1.2 g__Acidianus 25 seqs 1.2.12.3.1.2.1 Unclassified 19 seqs 1.2.12.3.1.2.1.45 OTU 19 seqs prokMSA_id:968 X89852.1 Acidianus infernus str. DSM 3191 prokMSA_id:970 X90484.1 Acidianus ambivalens str. DSM 3772 prokMSA_id:972 U38362.1 Acidianus-like str.ICHT prokMSA_id:975 D26489.1 Acidianus brierleyi str. IFO15269 (DSM1651) prokMSA_id:19329 AF226987.1 Acidianus tengchongenses prokMSA_id:99785 AJ634763.1 Acidianus convivator str. AA9 prokMSA_id:113094 AY907891.1 Acidianus sp. str. JP7 prokMSA_id:113565 AJ884675.1 Acidianus pozzuoliensis prokMSA_id:140236 DQ178998.2 Geochemical Controls on Microbial Population Rainbow and Joseph's Coat Hot Springs Yellowstone National Park hot springs water clone SK312 prokMSA_id:161875 DQ383362.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_35A prokMSA_id:163132 DQ383352.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_47B prokMSA_id:163590 DQ383359.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_39B prokMSA_id:164580 DQ383342.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_22D prokMSA_id:167074 DQ383365.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_22B prokMSA_id:169914 DQ383345.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_2C prokMSA_id:172205 DQ383341.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_21B prokMSA_id:276812 EU545800.1 Acidianus sp. str. BT prokMSA_id:559414 NR_028221.1 Acidianus ambivalens str. LEI 10; DSM 3772 prokMSA_id:568672 FJ154516.1 Acidianus ambivalens str. 9191 1.2.12.3.1.2.2 s__Acidianus brierleyi 3 seqs 1.2.12.3.1.2.2.46 OTU 3 seqs prokMSA_id:973 U38359.1 Acidianus brierleyi prokMSA_id:974 X90477.1 Acidianus brierleyi str. DSM 1651 prokMSA_id:536743 FJ154515.1 Acidianus brierleyi str. 8954 1.2.12.3.1.2.3 s__Acidianus manzaensis 3 seqs 1.2.12.3.1.2.3.47 OTU 3 seqs prokMSA_id:103086 AB182498.1 Acidianus manzaensis str. NA1 prokMSA_id:223871 EF522787.1 Acidianus manzaensis prokMSA_id:259487 EU563854.1 Acidianus manzaensis str. TA 1.2.12.3.1.3 g__Metallosphaera 89 seqs 1.2.12.3.1.3.1 Unclassified 68 seqs 1.2.12.3.1.3.1.48 OTU 68 seqs prokMSA_id:111392 AY882686.2 hot spring clone SK128 prokMSA_id:111453 AY882805.2 hot spring clone SK256 prokMSA_id:111593 AY882836.2 hot spring clone SK287 prokMSA_id:111627 AY882800.2 hot spring clone SK251 prokMSA_id:111687 AY882807.2 hot spring clone SK258 prokMSA_id:111758 AY882830.2 hot spring clone SK281 prokMSA_id:111919 AY882824.2 hot spring clone SK275 prokMSA_id:112008 AY882822.2 hot spring clone SK273 prokMSA_id:112247 AY882806.2 hot spring clone SK257 prokMSA_id:112285 AY882688.2 hot spring clone SK130 prokMSA_id:139599 DQ179029.2 Geochemical Controls on Microbial Population Rainbow and Joseph's Coat Hot Springs Yellowstone National Park hot springs water clone SK343 prokMSA_id:140238 DQ179031.2 Geochemical Controls on Microbial Population Rainbow and Joseph's Coat Hot Springs Yellowstone National Park hot springs water clone SK345 prokMSA_id:145626 DQ350777.1 Isolation and iron-oxidizing thermophilic acidophile acid-sulfate-chloride geothermal springs Yellowstone National Park Sulfolobales isolate KOZ01Sulfolobales str. KOZ01 prokMSA_id:161817 DQ834142.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK890 prokMSA_id:162085 DQ834203.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK951 prokMSA_id:162120 DQ834200.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK948 prokMSA_id:162498 DQ834151.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK899 prokMSA_id:163116 DQ834053.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK801 prokMSA_id:163302 DQ834150.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK898 prokMSA_id:163701 DQ834054.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK802 prokMSA_id:164164 DQ834237.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK985 prokMSA_id:164442 DQ834239.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK987 prokMSA_id:164932 DQ832006.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone AN129 prokMSA_id:165837 DQ831978.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone AN101 prokMSA_id:166215 DQ834199.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK947 prokMSA_id:166434 DQ834059.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK807 prokMSA_id:166722 DQ831980.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone AN103 prokMSA_id:167007 DQ834238.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK986 prokMSA_id:167939 DQ834143.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK891 prokMSA_id:168095 DQ834153.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK901 prokMSA_id:168108 DQ834242.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK990 prokMSA_id:168123 DQ834147.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK895 prokMSA_id:168176 DQ834206.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK954 prokMSA_id:168479 DQ834243.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK991 prokMSA_id:168958 DQ834235.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK983 prokMSA_id:169223 DQ834155.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK903 prokMSA_id:169420 DQ834060.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK808 prokMSA_id:169546 DQ834145.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK893 prokMSA_id:169899 DQ834233.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK981 prokMSA_id:169948 DQ834198.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK946 prokMSA_id:169974 DQ834149.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK897 prokMSA_id:170084 DQ834052.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK800 prokMSA_id:170869 DQ834196.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK944 prokMSA_id:170965 DQ834148.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK896 prokMSA_id:170997 DQ834241.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK989 prokMSA_id:171233 DQ834197.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK945 prokMSA_id:171488 DQ834061.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK809 prokMSA_id:171606 DQ834234.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK982 prokMSA_id:171780 DQ834205.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK953 prokMSA_id:171871 DQ834146.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK894 prokMSA_id:172773 DQ832007.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone AN130 prokMSA_id:172795 DQ834057.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK805 prokMSA_id:172850 DQ831979.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone AN102 prokMSA_id:172921 DQ834240.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK988 prokMSA_id:173369 DQ834207.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK955 prokMSA_id:173613 DQ834144.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK892 prokMSA_id:173653 DQ834195.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK943 prokMSA_id:174502 DQ924836.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW296 prokMSA_id:176286 DQ924840.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW300 prokMSA_id:176606 EF156617.1 Microbial Population Norris Geyser Basin Yellowstone National Park Koz Spring clone KOZ177 prokMSA_id:177860 DQ924835.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW295 prokMSA_id:178655 DQ924837.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW297 prokMSA_id:183025 EF156615.1 Microbial Population Norris Geyser Basin Yellowstone National Park Koz Spring clone KOZ175 prokMSA_id:183718 DQ924838.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW298 prokMSA_id:186361 DQ924839.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW299 prokMSA_id:187445 DQ924777.1 Microbial Population Norris Geyser Basin Yellowstone National Park Echinus Hot Spring clone BW237 prokMSA_id:189720 DQ924641.1 Microbial Population Norris Geyser Basin Yellowstone National Park Big Red Hot Spring clone BW100 prokMSA_id:194846 DQ924746.1 Microbial Population Norris Geyser Basin Yellowstone National Park Echinus Hot Spring clone BW206 1.2.12.3.1.3.2 s__Metallosphaera sedula 21 seqs 1.2.12.3.1.3.2.49 OTU 21 seqs prokMSA_id:977 U38361.1 Metallosphaera sedula prokMSA_id:978 D26491.1 Metallosphaera sedula str. IFO15509 (DSM5348) prokMSA_id:979 X90481.1 Metallosphaera sedula str. DSM 5348 prokMSA_id:980 X90482.1 Metallosphaera prunae str. Ron12/II = DSM 10039 prokMSA_id:981 AF167083.1 Metallosphaera sp. str. J1 prokMSA_id:162715 DQ383322.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_22C prokMSA_id:163797 DQ383344.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_29C prokMSA_id:165018 DQ383349.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_37D prokMSA_id:166658 DQ383343.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_23D prokMSA_id:167108 DQ383333.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_34A prokMSA_id:167830 DQ383332.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_25B prokMSA_id:168643 DQ383339.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_20C prokMSA_id:170112 DQ383364.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_21B prokMSA_id:177038 EF142855.1 Metallosphaera sp. str. YN23 prokMSA_id:179264 NZ_AAVI01000005.1 Metallosphaera sedula str. DSM 5348 prokMSA_id:195593 AAVI01000005.1 Metallosphaera sedula str. DSM 5348 prokMSA_id:218130 CP000682.1 Metallosphaera sedula str. DSM 5348 prokMSA_id:218458 EF522786.1 Metallosphaera sedula prokMSA_id:226044 NC_009440.1 Metallosphaera sedula str. DSM 5348 prokMSA_id:549028 NR_029300.1 Metallosphaera prunae str. Ron12/II; DSM 10039 prokMSA_id:555048 NR_028222.1 Metallosphaera hakonensis str. H01-1; DSM 7519 1.2.12.3.1.4 g__Stygiolobus 25 seqs 1.2.12.3.1.4.50 OTU 25 seqs prokMSA_id:954 U38360.1 Sulfolobus sp str. B6/2 prokMSA_id:956 X90480.1 Stygiolobus azoricus str. DSM 6296 prokMSA_id:140752 DQ219791.1 mercury hotspring supports occurrence domain-specific forms mercuric reductase crenarchaeote clone CIB4 prokMSA_id:140827 DQ219789.1 mercury hotspring supports occurrence domain-specific forms mercuric reductase crenarchaeote clone C1C7 prokMSA_id:162027 DQ834067.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK815 prokMSA_id:163462 DQ383336.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_8B prokMSA_id:165256 DQ834069.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK817 prokMSA_id:165736 DQ834063.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK811 prokMSA_id:165942 DQ834071.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK819 prokMSA_id:166814 DQ383354.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_8A prokMSA_id:168589 DQ383331.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_13C prokMSA_id:168607 DQ383348.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_37B prokMSA_id:169438 DQ383361.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_34B prokMSA_id:169589 DQ834068.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK816 prokMSA_id:169609 DQ383363.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_50A prokMSA_id:169762 DQ383353.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_48C prokMSA_id:170141 DQ383325.2 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_29A prokMSA_id:170334 DQ834064.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK812 prokMSA_id:170516 DQ383328.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_11B prokMSA_id:170721 DQ834070.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK818 prokMSA_id:170878 DQ834066.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK814 prokMSA_id:171811 DQ383346.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-B_Clone_33B prokMSA_id:178533 DQ924644.1 Microbial Population Norris Geyser Basin Yellowstone National Park Big Red Hot Spring clone BW103 prokMSA_id:188413 DQ924648.1 Microbial Population Norris Geyser Basin Yellowstone National Park Big Red Hot Spring clone BW107 prokMSA_id:196870 DQ924649.1 Microbial Population Norris Geyser Basin Yellowstone National Park Big Red Hot Spring clone BW108 1.2.12.3.1.5 g__Sulfolobus 90 seqs 1.2.12.3.1.5.1 Unclassified 68 seqs 1.2.12.3.1.5.1.51 OTU 68 seqs prokMSA_id:938 X90483.1 Sulfolobus solfataricus str. Ron12/III prokMSA_id:950 X90485.1 Sulfolobus thuringiensis str. Ron12/I prokMSA_id:952 U05018.2 Sulfolobus acidocaldarius prokMSA_id:953 X03235.1 Sulfolobus solfataricus prokMSA_id:964 AB010957.1 Sulfolobus yangmingensis str. YM prokMSA_id:18034 AF425662.1 Sulfolobus sp. str. MVSoil6/SC1 prokMSA_id:29928 AF391995.1 thermal soil clone YNPFFA30 prokMSA_id:30893 AF391996.1 thermal soil clone YNPFFA52 prokMSA_id:35548 AF391994.1 thermal soil clone YNPFFA2 prokMSA_id:59549 AY135637.1 Sulfolobus tengchongensis str. RT8-4 prokMSA_id:69935 AF425660.1 Sulfolobus sp. str. NGB23/00 prokMSA_id:70345 AF425656.1 Sulfolobus sp. str. FF5/00 prokMSA_id:71769 AF425657.1 Sulfolobus sp. str. MV2/99 prokMSA_id:71832 AF425661.1 Sulfolobus sp. str. MVSoil3/SC2 prokMSA_id:73229 AF425653.1 Sulfolobus sp. str. RC6/00 prokMSA_id:74206 AF425654.1 Sulfolobus sp. str. NGB6/00 prokMSA_id:74215 AF425652.1 Sulfolobus sp. str. AMP12/99 prokMSA_id:92401 AY247897.1 Sulfolobus islandicus str. B6A prokMSA_id:92457 AY247895.1 Sulfolobus islandicus str. M14A prokMSA_id:92554 AY247898.1 Sulfolobus islandicus str. B6B prokMSA_id:92579 AY247900.1 Sulfolobus islandicus str. N15B prokMSA_id:92813 AY247893.1 Sulfolobus islandicus str. I2 prokMSA_id:92884 AY247894.1 Sulfolobus islandicus str. I7 prokMSA_id:93061 AY247899.1 Sulfolobus islandicus str. N15A prokMSA_id:161774 DQ383319.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_clone_10A prokMSA_id:162583 DQ383330.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_12C prokMSA_id:163185 DQ834248.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK996 prokMSA_id:165351 DQ383320.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_clone_16A prokMSA_id:166358 DQ383329.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_11C prokMSA_id:166822 DQ383367.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_36B prokMSA_id:167293 DQ383369.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_44B prokMSA_id:167495 DQ383327.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_11A prokMSA_id:167501 DQ383326.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_41B prokMSA_id:167908 DQ383334.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_38B prokMSA_id:168858 DQ834249.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK997 prokMSA_id:170597 DQ383335.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_3A prokMSA_id:170642 DQ383370.1 Archaeal two thermophilic chalcopyrite reactors bioleaching reactor clone MTC-A_Clone_47B prokMSA_id:174505 DQ924661.1 Microbial Population Norris Geyser Basin Yellowstone National Park Big Red Hot Spring clone BW120 prokMSA_id:175614 AB262002.1 Sulfolobus sp. str. Sko-3 prokMSA_id:176162 DQ924850.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW310 prokMSA_id:176194 DQ924847.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW307 prokMSA_id:176434 DQ924660.1 Microbial Population Norris Geyser Basin Yellowstone National Park Big Red Hot Spring clone BW119 prokMSA_id:178877 DQ924848.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW308 prokMSA_id:180088 DQ924851.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW311 prokMSA_id:183097 AB262005.1 Sulfolobus sp. str. M02 prokMSA_id:183790 DQ924849.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW309 prokMSA_id:183875 AB262006.1 Sulfolobus sp. str. NO82 prokMSA_id:186586 DQ924852.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW312 prokMSA_id:187449 DQ924780.1 Microbial Population Norris Geyser Basin Yellowstone National Park Echinus Hot Spring clone BW240 prokMSA_id:190624 DQ924845.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW305 prokMSA_id:240469 EF660335.1 Sulfolobus beitou str. DBS prokMSA_id:241978 EF660336.1 Sulfolobus vallisabyssus str. F prokMSA_id:269843 EU545801.1 Sulfolobus tokodaii str. TW prokMSA_id:323416 EU729124.1 Sulfolobus sp. str. K4-1 prokMSA_id:375302 CP001401.1 Sulfolobus islandicus str. M.16.27 prokMSA_id:378558 CP001404.1 Sulfolobus islandicus str. Y.N.15.51 prokMSA_id:420249 CP001400.1 Sulfolobus islandicus str. M.14.25 prokMSA_id:428314 CP001399.1 Sulfolobus islandicus str. L.S.2.15 prokMSA_id:457386 CP001403.1 Sulfolobus islandicus str. Y.G.57.14 prokMSA_id:461777 CP001402.1 Sulfolobus islandicus str. M.16.4 prokMSA_id:512716 FJ797324.1 Planktonic and bottom-dwelled microbial -temperature sulfuric ponds Tatung Volcano area northern Taiwan acidic hot spring water clone HS3wa_62 prokMSA_id:522485 CP001731.1 Sulfolobus islandicus str. L.D.8.5 prokMSA_id:536537 GU256550.1 Sulfolobus sp. T1 prokMSA_id:538500 FJ870913.1 Sulfolobus sp. str. G4ST-T-11 prokMSA_id:547688 FJ489512.1 Sulfolobus sp. str. TYQ13 prokMSA_id:564980 FJ489516.1 Sulfolobus sp. str. DGG22 prokMSA_id:568841 FJ489510.1 Sulfolobus sp. str. HG13 prokMSA_id:592302 GQ495670.1 Sulfolobus sp. str. G4ST-2 1.2.12.3.1.5.2 s__Sulfolobus acidocaldarius 3 seqs 1.2.12.3.1.5.2.52 OTU 3 seqs prokMSA_id:951 D14876.1 Sulfolobus acidocaldarius str. ATCC33909 prokMSA_id:130028 NC_007181.1 Sulfolobus acidocaldarius str. DSM 639 prokMSA_id:133501 CP000077.1 Sulfolobus acidocaldarius str. DSM 639 1.2.12.3.1.5.3 s__Sulfolobus metallicus 6 seqs 1.2.12.3.1.5.3.53 OTU 6 seqs prokMSA_id:945 U40813.1 Sulfolobus metallicus str. LM prokMSA_id:946 X90479.1 Sulfolobus metallicus str. DSM 6482 prokMSA_id:165271 DQ832062.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone AN185 prokMSA_id:267289 EU419200.1 Sulfolobus metallicus str. DK-I15/60 prokMSA_id:511163 FJ797322.1 Planktonic and bottom-dwelled microbial -temperature sulfuric ponds Tatung Volcano area northern Taiwan acidic hot spring water clone HS4wa_19 prokMSA_id:562255 FJ797343.1 Planktonic and bottom-dwelled microbial -temperature sulfuric ponds Tatung Volcano area northern Taiwan acidic hot spring water clone LH2wa_90 1.2.12.3.1.5.4 s__Sulfolobus solfataricus 10 seqs 1.2.12.3.1.5.4.54 OTU 10 seqs prokMSA_id:940 M32504.1 Sulfolobus shibatae prokMSA_id:941 X90478.1 Sulfolobus solfataricus str. DSM 1616 prokMSA_id:942 D26490.1 Sulfolobus solfataricus str. IFO15331 (DSM1616) prokMSA_id:54467 NC_002754.1 Sulfolobus solfataricus str. P2 prokMSA_id:92332 AY247901.1 Sulfolobus islandicus str. C51 prokMSA_id:113323 AY907889.1 Sulfolobus sp. str. JP2 prokMSA_id:114036 AY907890.1 Sulfolobus sp. str. JP3 prokMSA_id:137123 AE006720.1 Sulfolobus solfataricus str. P2 prokMSA_id:531271 CP001800.1 Sulfolobus solfataricus str. 98/2 prokMSA_id:580132 NR_029127.1 Sulfolobus solfataricus str. IFO 15331; DSM 1616 1.2.12.3.1.5.5 s__Sulfolobus tokodaii 3 seqs 1.2.12.3.1.5.5.55 OTU 3 seqs prokMSA_id:46167 NC_003106.2 Sulfolobus tokodaii str. 7 prokMSA_id:54912 AB022438.1 Sulfolobus tokodaii str. strain 7 prokMSA_id:137114 BA000023.2 Sulfolobus tokodaii str. 7 1.2.12.4 o__Thermoproteales 76 seqs 1.2.12.4.1 f__Thermofilaceae 18 seqs 1.2.12.4.1.1 Unclassified 11 seqs 1.2.12.4.1.1.56 OTU 11 seqs prokMSA_id:16774 X99564.1 isolate S10TFL prokMSA_id:70948 AF176345.1 hot spring clone pBA1 prokMSA_id:73046 AF419633.1 Guaymas Basin hydrothermal sediment clone GBa2r048 prokMSA_id:111785 AY882731.2 hot spring clone SK176 prokMSA_id:140660 DQ179010.2 Geochemical Controls on Microbial Population Rainbow and Joseph's Coat Hot Springs Yellowstone National Park hot springs water clone SK324 prokMSA_id:143862 DQ243772.2 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Sylvan Spring clone YNP_SSp_A10 prokMSA_id:171874 DQ833797.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK432 prokMSA_id:185844 DQ924693.1 Microbial Population Norris Geyser Basin Yellowstone National Park Cistern Hot Spring clone BW152 prokMSA_id:186990 DQ924697.1 Microbial Population Norris Geyser Basin Yellowstone National Park Cistern Hot Spring clone BW156 prokMSA_id:193543 DQ924694.1 Microbial Population Norris Geyser Basin Yellowstone National Park Cistern Hot Spring clone BW153 prokMSA_id:212332 AB293224.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Pbsc2A16 1.2.12.4.1.2 g__Thermofilum 7 seqs 1.2.12.4.1.2.1 Unclassified 1 seq 1.2.12.4.1.2.1.57 OTU 1 seq prokMSA_id:49927 AF255605.1 Thermofilaceae str. SRI-370 1.2.12.4.1.2.2 s__Thermofilum pendens 6 seqs 1.2.12.4.1.2.2.58 OTU 6 seqs prokMSA_id:826 X14835.1 Thermofilum pendens str. Hvv3 DSM 2475 prokMSA_id:164281 AASJ01000002.1 Thermofilum pendens str. Hrk 5 prokMSA_id:169626 NZ_AASJ01000002.1 Thermofilum pendens str. Hrk 5 prokMSA_id:176360 CP000505.1 Thermofilum pendens str. Hrk 5 prokMSA_id:181142 NC_008698.1 Thermofilum pendens str. Hrk 5 prokMSA_id:584409 NR_029214.1 Thermofilum pendens str. Hvv3 DSM 2475 1.2.12.4.2 f__Thermoproteaceae 58 seqs 1.2.12.4.2.1 Unclassified 9 seqs 1.2.12.4.2.1.59 OTU 9 seqs prokMSA_id:872 M35966.1 Thermoproteus tenax prokMSA_id:103094 AY538162.2 Thermoproteus tenax str. YS44 prokMSA_id:143713 DQ243774.2 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Sylvan Spring clone YNP_SSp_A50 prokMSA_id:174652 EF156577.1 Microbial Population Norris Geyser Basin Yellowstone National Park Koz Spring clone KOZ137 prokMSA_id:185976 DQ924707.1 Microbial Population Norris Geyser Basin Yellowstone National Park Cistern Hot Spring clone BW166 prokMSA_id:191774 DQ924801.1 Microbial Population Norris Geyser Basin Yellowstone National Park Monarch Hot Spring clone BW261 prokMSA_id:196298 DQ924708.1 Microbial Population Norris Geyser Basin Yellowstone National Park Cistern Hot Spring clone BW167 prokMSA_id:196393 EF156576.1 Microbial Population Norris Geyser Basin Yellowstone National Park Koz Spring clone KOZ136 prokMSA_id:198120 DQ924709.1 Microbial Population Norris Geyser Basin Yellowstone National Park Cistern Hot Spring clone BW168 1.2.12.4.2.2 g__Pyrobaculum 15 seqs 1.2.12.4.2.2.1 Unclassified 7 seqs 1.2.12.4.2.2.1.60 OTU 7 seqs prokMSA_id:20435 AJ277124.1 Pyrobaculum arsenaticum str. PZ6 prokMSA_id:44220 AB029339.1 Pyrobaculum oguniense prokMSA_id:52477 AJ277125.1 Pyrobaculum sp. str. WIJ3 prokMSA_id:141351 DQ243751.2 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Obsidian Pool clone YNP_ObP_A166 prokMSA_id:141719 DQ243746.1 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Obsidian Pool clone YNP_ObP_A130 prokMSA_id:350580 DQ778007.1 Pyrobaculum sp. AQ1.S2 prokMSA_id:550520 NR_028921.1 Pyrobaculum arsenaticum str. PZ6; DSM 13514 1.2.12.4.2.2.2 s__Pyrobaculum calidifontis 4 seqs 1.2.12.4.2.2.2.61 OTU 4 seqs prokMSA_id:870 X81886.1 Pyrobaculum neutrophilum str. NZ1 prokMSA_id:78804 AB078332.1 Pyrobaculum calidifontis str. VA1 prokMSA_id:210224 NC_009073.1 Pyrobaculum calidifontis str. JCM 11548 prokMSA_id:210801 CP000561.1 Pyrobaculum calidifontis str. JCM 11548 1.2.12.4.2.2.3 s__Pyrobaculum islandicum 4 seqs 1.2.12.4.2.2.3.62 OTU 4 seqs prokMSA_id:868 L07511.1 Pyrobaculum islandicum str. geo3 prokMSA_id:34186 AB063647.1 Pyrobaculum organotrophum str. JCM 9190 prokMSA_id:174065 CP000504.1 Pyrobaculum islandicum str. DSM 4184 prokMSA_id:178974 NC_008701.1 Pyrobaculum islandicum str. DSM 4184 1.2.12.4.2.3 g__Thermocladium 5 seqs 1.2.12.4.2.3.63 OTU 5 seqs prokMSA_id:877 AB005296.1 Thermocladium modestius str. IC-125 prokMSA_id:111737 AY882831.2 hot spring clone SK282 prokMSA_id:112407 AY882842.2 hot spring clone SK293 prokMSA_id:179017 EF156488.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY123 prokMSA_id:184181 EF156489.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY124 1.2.12.4.2.4 g__Vulcanisaeta 29 seqs 1.2.12.4.2.4.1 Unclassified 22 seqs 1.2.12.4.2.4.1.64 OTU 22 seqs prokMSA_id:148674 AY882719.2 Geochemical Controls on Microbial Population Rainbow and Joseph's Coat Hot Springs Yellowstone National Park hot spring clone SK164 prokMSA_id:161719 DQ833773.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK408 prokMSA_id:162362 DQ833769.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK404 prokMSA_id:163599 DQ833801.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK436 prokMSA_id:166560 DQ833775.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK410 prokMSA_id:168781 DQ833774.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK409 prokMSA_id:169343 DQ833815.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK452 prokMSA_id:170547 DQ833800.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK435 prokMSA_id:171391 DQ833811.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK448 prokMSA_id:176279 DQ924791.1 Microbial Population Norris Geyser Basin Yellowstone National Park Monarch Hot Spring clone BW251 prokMSA_id:183851 DQ924656.1 Microbial Population Norris Geyser Basin Yellowstone National Park Big Red Hot Spring clone BW115 prokMSA_id:188346 DQ924699.1 Microbial Population Norris Geyser Basin Yellowstone National Park Cistern Hot Spring clone BW158 prokMSA_id:192765 DQ924803.1 Microbial Population Norris Geyser Basin Yellowstone National Park Monarch Hot Spring clone BW263 prokMSA_id:193936 DQ924797.1 Microbial Population Norris Geyser Basin Yellowstone National Park Monarch Hot Spring clone BW257 prokMSA_id:194624 EF156578.1 Microbial Population Norris Geyser Basin Yellowstone National Park Koz Spring clone KOZ138 prokMSA_id:195167 DQ924807.1 Microbial Population Norris Geyser Basin Yellowstone National Park Monarch Hot Spring clone BW267 prokMSA_id:195426 DQ924711.1 Microbial Population Norris Geyser Basin Yellowstone National Park Cistern Hot Spring clone BW170 prokMSA_id:197113 DQ924710.1 Microbial Population Norris Geyser Basin Yellowstone National Park Cistern Hot Spring clone BW169 prokMSA_id:198257 DQ924806.1 Microbial Population Norris Geyser Basin Yellowstone National Park Monarch Hot Spring clone BW266 prokMSA_id:198370 DQ924805.1 Microbial Population Norris Geyser Basin Yellowstone National Park Monarch Hot Spring clone BW265 prokMSA_id:199723 DQ924804.1 Microbial Population Norris Geyser Basin Yellowstone National Park Monarch Hot Spring clone BW264 prokMSA_id:544992 FJ797314.1 Planktonic and bottom-dwelled microbial -temperature sulfuric ponds Tatung Volcano area northern Taiwan acidic hot spring sediment clone HS3sa_56 1.2.12.4.2.4.2 s__Vulcanisaeta distributa 7 seqs 1.2.12.4.2.4.2.65 OTU 7 seqs prokMSA_id:18315 AB063630.1 Vulcanisaeta str. IC-017 prokMSA_id:19003 AB063639.1 Vulcanisaeta str. IC-065 prokMSA_id:23289 AB063645.1 Vulcanisaeta souniana str. IC-059 prokMSA_id:23618 AB063641.1 Vulcanisaeta str. IC-135 prokMSA_id:40703 AB063640.1 Vulcanisaeta str. IC-124 prokMSA_id:540161 FJ797325.1 Planktonic and bottom-dwelled microbial -temperature sulfuric ponds Tatung Volcano area northern Taiwan acidic hot spring water clone HS3wa_70 prokMSA_id:559851 NR_028628.1 Vulcanisaeta souniana str. IC-059; DSM 14430 1.2.12.5 o__YNPFFA 24 seqs 1.2.12.5.1 f__A13 6 seqs 1.2.12.5.1.66 OTU 6 seqs prokMSA_id:18084 AF325182.1 hot spring clone A6 prokMSA_id:51122 AF325185.1 hot spring clone A13 prokMSA_id:112284 AY882844.2 hot spring clone SK295 prokMSA_id:166057 DQ834117.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK865 prokMSA_id:166177 DQ832061.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone AN184 prokMSA_id:181295 EF156485.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY120 1.2.12.5.2 f__SK322 18 seqs 1.2.12.5.2.67 OTU 18 seqs prokMSA_id:34207 AF391990.1 thermal soil clone YNPFFA4 prokMSA_id:37402 AF391989.1 thermal soil clone YNPFFA1 prokMSA_id:41999 AF391991.1 thermal soil clone YNPFFA23 prokMSA_id:45996 AF391993.1 thermal soil clone YNPFFA108 prokMSA_id:112022 AY882690.2 hot spring clone SK132 prokMSA_id:139576 DQ179007.2 Geochemical Controls on Microbial Population Rainbow and Joseph's Coat Hot Springs Yellowstone National Park hot springs water clone SK321 prokMSA_id:139724 DQ179001.2 Geochemical Controls on Microbial Population Rainbow and Joseph's Coat Hot Springs Yellowstone National Park hot springs water clone SK315 prokMSA_id:139733 DQ179003.2 Geochemical Controls on Microbial Population Rainbow and Joseph's Coat Hot Springs Yellowstone National Park hot springs water clone SK317 prokMSA_id:140221 DQ179008.3 Geochemical Controls on Microbial Population Rainbow and Joseph's Coat Hot Springs Yellowstone National Park hot springs water clone SK322 prokMSA_id:140517 DQ179004.2 Geochemical Controls on Microbial Population Rainbow and Joseph's Coat Hot Springs Yellowstone National Park hot springs water clone SK318 prokMSA_id:145756 AY882677.2 Geochemical Controls on Microbial Population Rainbow and Joseph's Coat Hot Springs Yellowstone National Park hot spring clone SK119 prokMSA_id:150894 DQ179006.3 Geochemical Controls on Microbial Population Rainbow and Joseph's Coat Hot Springs Yellowstone National Park hot springs water clone SK320 prokMSA_id:163037 DQ834246.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK994 prokMSA_id:166693 DQ834245.1 Geochemical Controls on Microbial Population and Joseph's Coat Springs Yellowstone National Park Rainbow 2 Hot Spring clone SK993 prokMSA_id:174835 DQ924854.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW314 prokMSA_id:175623 DQ924853.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW313 prokMSA_id:180847 DQ924749.1 Microbial Population Norris Geyser Basin Yellowstone National Park Echinus Hot Spring clone BW209 prokMSA_id:181881 DQ924842.1 Microbial Population Norris Geyser Basin Yellowstone National Park Whirligig Hot Spring clone BW302 1.2.2 c__C2 225 seqs 1.2.2.1 Unclassified 7 seqs 1.2.2.1.3 OTU 7 seqs prokMSA_id:105066 AY627488.1 deep-sea clone BC05-2A-09 prokMSA_id:105679 AB113635.1 subsurface geothermal water clone HAuD-LA43 prokMSA_id:107293 AY592466.1 deep-sea mud volcano clone Napoli-2A-01; BC07-2A-01 prokMSA_id:126212 AB213061.1 hydrothermal fluid clone Fapm1aA37 prokMSA_id:142752 DQ300343.1 Archaeal and geochemical energy yields on Vulcano Island Italy geothermal well clone VulcPIw.88 prokMSA_id:144071 DQ300318.1 Archaeal and geochemical energy yields on Vulcano Island Italy geothermal well clone VulcPIw.10 prokMSA_id:252451 AB329810.1 Microbial southern Mariana trough hydrothermal deposits clone YS18As31 1.2.2.2 o__B10 71 seqs 1.2.2.2.4 OTU 71 seqs prokMSA_id:119614 AB213062.1 hydrothermal fluid clone Fapm1aA55 prokMSA_id:120842 AB213054.1 hydrothermal fluid clone Fapm1aA02 prokMSA_id:122375 AB213093.1 hydrothermal fluid clone Papm3A34 prokMSA_id:123201 AB213055.1 hydrothermal fluid clone Fapm1aA03 prokMSA_id:125340 AB213094.1 hydrothermal fluid clone Papm3A35 prokMSA_id:126348 AB213056.1 hydrothermal fluid clone Fapm1aA08 prokMSA_id:127542 AB213057.1 hydrothermal fluid clone Fapm1aA11 prokMSA_id:127780 AB213059.1 hydrothermal fluid clone Fapm1aA13 prokMSA_id:138956 AM076831.1 Unpublished data freshwater sulfurous lake clone B10 prokMSA_id:140252 AB237759.1 microorganisms deep subsurface groundwater sedimentary rock milieu clone HDBW-WA26 prokMSA_id:140627 AB237760.1 microorganisms deep subsurface groundwater sedimentary rock milieu clone HDBW-WA27 prokMSA_id:178858 AB284821.1 Microbial system southern Mariana Trough hydrothermal clone F2apm1A04 prokMSA_id:187230 DQ841220.1 Microbial deep subsurface gas- water Minami-kanto Japan natural gas field clone MOB4-14 prokMSA_id:198216 AB284822.1 Microbial system southern Mariana Trough hydrothermal clone F2apm1A20 prokMSA_id:237101 EU280218.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_10E9 prokMSA_id:237757 EU284649.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-B10 prokMSA_id:239163 EU284608.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-E4 prokMSA_id:239672 EU284667.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-H9 prokMSA_id:241830 EU284614.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone COSAS-G1 prokMSA_id:242680 EU284663.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-G12 prokMSA_id:243675 EU284658.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-E9 prokMSA_id:247355 EU284664.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-G9 prokMSA_id:248510 EU284650.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-B11 prokMSA_id:250709 AB329755.1 Microbial southern Mariana trough hydrothermal deposits clone YS16Ac05 prokMSA_id:251654 EU284665.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-H10 prokMSA_id:252393 AB329790.1 Microbial southern Mariana trough hydrothermal deposits clone YS16As18 prokMSA_id:254439 AB329809.1 Microbial southern Mariana trough hydrothermal deposits clone YS18As28 prokMSA_id:255080 EU284653.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-C12 prokMSA_id:256174 EU284648.1 'Candidatus Nitrosopumilus maritimus' Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone IP1SAT-A9 prokMSA_id:257484 AB329800.1 Microbial southern Mariana trough hydrothermal deposits clone YS16As66 prokMSA_id:305849 EU915232.1 Microbial cenozoic sediments recovered Central Lomonosov Ridge Arctic Ocean Basin subseafloor sediment core 242 mbsf (IODP Leg 302) clone 242mbsf_1_1D prokMSA_id:308277 EU915228.1 Microbial cenozoic sediments recovered Central Lomonosov Ridge Arctic Ocean Basin subseafloor sediment core 242 mbsf (IODP Leg 302) clone 242mbsf_1_1C prokMSA_id:322321 AM713451.1 Archaea and their activity hydrate-bearing deep subsurface Hydrate Ridge (Cascadia Margin 204) marine sediments ODP leg 204 site 1250 24 mbsf clone ODP204_30_ArchU66 prokMSA_id:327201 EU915230.1 Microbial cenozoic sediments recovered Central Lomonosov Ridge Arctic Ocean Basin subseafloor sediment core 242 mbsf (IODP Leg 302) clone 242mbsf_1_2A prokMSA_id:327442 EU915231.1 Microbial cenozoic sediments recovered Central Lomonosov Ridge Arctic Ocean Basin subseafloor sediment core 242 mbsf (IODP Leg 302) clone 242mbsf_1_3E prokMSA_id:328176 AM713450.1 Archaea and their activity hydrate-bearing deep subsurface Hydrate Ridge (Cascadia Margin 204) marine sediments ODP leg 204 site 1250 24 mbsf clone ODP204_30_ArchU19 prokMSA_id:346158 EU915229.1 Microbial cenozoic sediments recovered Central Lomonosov Ridge Arctic Ocean Basin subseafloor sediment core 242 mbsf (IODP Leg 302) clone 242mbsf_1_1A prokMSA_id:371847 FJ655659.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3B8 prokMSA_id:381172 FJ655655.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3B3 prokMSA_id:390331 FJ655674.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3D9 prokMSA_id:398183 FJ655687.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3G1 prokMSA_id:418667 FJ655612.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_10E9 prokMSA_id:430433 FJ655647.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3A2 prokMSA_id:444679 FJ655686.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3F5 prokMSA_id:447740 FJ655680.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3F1 prokMSA_id:447843 FJ655650.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3A9 prokMSA_id:449046 FJ655662.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3C4 prokMSA_id:452588 FJ655675.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3E10 prokMSA_id:462844 FJ655661.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3C2 prokMSA_id:463324 FJ655649.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3A7 prokMSA_id:466609 FJ655656.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3B4 prokMSA_id:512931 FJ902679.1 phreatic limestone sinkholes northeastern Mexico biomat 80m deep cenote La Palita clone LP80MA5 prokMSA_id:523571 GU135502.1 archaeal Lake Pavin sediment (37 cm) clone Pav-sed-522 prokMSA_id:535188 FJ901461.1 phreatic limestone sinkholes northeastern Mexico biomat 80m deep cenote La Palita clone LP80MA42 prokMSA_id:535216 FJ901865.1 phreatic limestone sinkholes northeastern Mexico biomat sediment cenote La Palita clone LPBBA33 prokMSA_id:540290 EU420690.1 Archaeal and Kao-Mei Wetland clone KM07-Ca-8 prokMSA_id:542607 FJ649525.1 Prokaryotic layer S1 Amsterdam Mud Volcano sapropel sediment East Mediterranean Sea clone AMSMV-S1-A36 prokMSA_id:542849 FN428813.1 Biomarker indicators anaerobic oxidizers diffusive methane fluxes brackish-marine sediments Aarhus Bay (Henry IV/04) clone Arch43 prokMSA_id:545095 FJ901467.1 phreatic limestone sinkholes northeastern Mexico biomat 80m deep cenote La Palita clone LP80MA7 prokMSA_id:545878 EU420714.1 Archaeal and Kao-Mei Wetland clone KM07-Ama-1-5 prokMSA_id:550296 FJ901861.1 phreatic limestone sinkholes northeastern Mexico biomat sediment cenote La Palita clone LPBBA24 prokMSA_id:561560 FJ902692.1 phreatic limestone sinkholes northeastern Mexico biomat sediment cenote La Palita clone LPBB32 prokMSA_id:562837 FJ901906.1 phreatic limestone sinkholes northeastern Mexico biomat sediment cenote La Palita clone LPBBA90 prokMSA_id:566583 FJ901888.1 phreatic limestone sinkholes northeastern Mexico biomat sediment cenote La Palita clone LPBBA63 prokMSA_id:569087 FJ485532.1 microbial autonomous rover world's deepest phreatic sinkhole water column El Zacaton 273m depth clone Z273FA95 prokMSA_id:571088 FJ901444.1 phreatic limestone sinkholes northeastern Mexico biomat 80m deep cenote La Palita clone LP80MA10 prokMSA_id:574318 FJ649515.1 Prokaryotic layer S1 Amsterdam Mud Volcano sapropel sediment East Mediterranean Sea clone AMSMV-S1-A27 prokMSA_id:575372 FJ902722.1 phreatic limestone sinkholes northeastern Mexico biomat 30m deep cenote La Palita clone LP30MA79 prokMSA_id:579781 FJ902670.1 phreatic limestone sinkholes northeastern Mexico biomat 80m deep cenote La Palita clone LP80MA2 prokMSA_id:586341 FJ902685.1 phreatic limestone sinkholes northeastern Mexico biomat 102m deep cenote La Palita clone LP102MA64 prokMSA_id:588710 FJ901447.1 phreatic limestone sinkholes northeastern Mexico biomat 80m deep cenote La Palita clone LP80MA13 1.2.2.3 o__pGrfC26 147 seqs 1.2.2.3.5 OTU 147 seqs prokMSA_id:880 U63345.1 hot spring clone pSL123 prokMSA_id:1171 L25305.1 hot spring clone pJP89 prokMSA_id:43667 AF424775.1 sludge clone 62-2 prokMSA_id:45742 AF424768.1 sludge clone 72-1 prokMSA_id:56717 AY082455.1 neutral pH mine biofilm clone 44a-A1-4 prokMSA_id:104592 AJ579323.1 marine sediment clone HMMVCen-26 prokMSA_id:104741 AJ579324.1 marine sediment clone HMMVCen-24 prokMSA_id:104896 AJ579325.1 marine sediment clone HMMVCen-27 prokMSA_id:105039 AJ579326.1 marine sediment clone HMMVCen-19 prokMSA_id:105531 AB113634.1 subsurface geothermal water clone HAuD-LA42 prokMSA_id:107535 AY592480.1 deep-sea mud volcano clone Napoli-2A-15; BC07-2A-15 prokMSA_id:107678 AJ576215.1 landfill leachate clone GZK15 prokMSA_id:109233 AJ704646.1 marine sediment clone HMMVCen-26 prokMSA_id:109234 AJ704647.1 marine sediment clone HMMVCen-24 prokMSA_id:109235 AJ704648.1 marine sediment clone HMMVCen-27 prokMSA_id:109236 AJ704649.1 marine sediment clone HMMVCen-19 prokMSA_id:139747 AB237757.1 microorganisms deep subsurface groundwater sedimentary rock milieu clone HDBW-WA24 prokMSA_id:142720 AB243802.1 Archaeal anaerobic rice paddy soil clone NRP-K prokMSA_id:144063 DQ243753.2 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Obsidian Pool clone YNP_ObP_A23 prokMSA_id:144537 AB243799.1 Archaeal anaerobic rice paddy soil clone NRP-H prokMSA_id:144549 DQ243757.2 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Obsidian Pool clone YNP_ObP_A5 prokMSA_id:202343 DQ522918.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-mid-14 prokMSA_id:235267 AB262705.1 microorganisms shal subsurface Sarobetsu mire peat soil clone HSM050P--4 prokMSA_id:235340 EU155991.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_4A prokMSA_id:235776 EU280212.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_H1 prokMSA_id:236879 EU155990.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_10B prokMSA_id:237012 EU280219.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_10F8 prokMSA_id:237470 EU280194.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_C5 prokMSA_id:238793 AB262704.1 microorganisms shal subsurface Sarobetsu mire peat soil clone HSM050P--3 prokMSA_id:239798 EU280205.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSP_C6 prokMSA_id:241626 EU280188.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_A7 prokMSA_id:244891 EU280198.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_D3 prokMSA_id:245562 EU280186.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_A5 prokMSA_id:245697 EU155993.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B9G prokMSA_id:246371 EU155996.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B2C prokMSA_id:246676 EU280193.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_C3 prokMSA_id:248588 EU280187.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_A6 prokMSA_id:248699 EU155995.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_3B prokMSA_id:248872 EU280214.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_H2 prokMSA_id:249981 EU280192.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_C2 prokMSA_id:250736 EU280210.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_E8 prokMSA_id:251062 EU155992.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B1D prokMSA_id:251384 EU280190.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_B12 prokMSA_id:251993 EU280213.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_H11 prokMSA_id:252577 EU280196.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_D10 prokMSA_id:253051 AB262706.1 microorganisms shal subsurface Sarobetsu mire peat soil clone HSM050P--5 prokMSA_id:253193 EU280199.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_D7 prokMSA_id:253917 EU280191.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_B9 prokMSA_id:254065 EU280195.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_C6 prokMSA_id:254458 EU155994.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_12C prokMSA_id:256271 EU280236.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSP_D1 prokMSA_id:278468 EU635904.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 87 C clone SSW_L4_E01 prokMSA_id:279131 EU635929.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 87 C clone SSW_L4_G03 prokMSA_id:282132 EU662686.1 Microbial -temperature sludges sludge manure pit clone S51 prokMSA_id:283010 EU662693.1 Microbial -temperature sludges sludge manure pit clone T23 prokMSA_id:283549 EU662672.1 Microbial -temperature sludges sludge manure pit clone P40 prokMSA_id:284901 EU662680.1 Microbial -temperature sludges sludge manure pit clone S7 prokMSA_id:285961 EU662694.1 Microbial -temperature sludges sludge manure pit clone T30 prokMSA_id:326681 EU924225.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC4_L2_F10 prokMSA_id:333295 EU924240.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC3_L2_E01 prokMSA_id:336090 EU924227.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC3_L2_G01 prokMSA_id:337415 EU924224.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC4_L5_B12 prokMSA_id:346497 EU924226.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC4_L2_F11 prokMSA_id:348161 EU910615.1 Eukaryal and Archaeal Middle Island sinkhole (Lake Huron USA) sediment clone D39 prokMSA_id:371325 FJ655644.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3H5 prokMSA_id:371817 FJ655623.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3A7 prokMSA_id:373460 FJ655714.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3F3 prokMSA_id:376428 FJ655710.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3E4 prokMSA_id:380306 FJ655631.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3D9 prokMSA_id:380452 FJ655627.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3C9 prokMSA_id:380620 FJ655707.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3D6 prokMSA_id:385481 FJ655586.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_B12 prokMSA_id:385632 FJ655713.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3F2 prokMSA_id:386070 FJ655625.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3B9 prokMSA_id:386618 FJ655590.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_C5 prokMSA_id:389114 FJ655704.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3C5 prokMSA_id:392271 FJ655630.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3D8 prokMSA_id:393480 FJ982762.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMPFLSS56m_10 prokMSA_id:395663 FJ655621.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_D1 prokMSA_id:397198 FJ655709.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3E3 prokMSA_id:398224 FJ655608.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_H2 prokMSA_id:400897 FJ655584.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_A7 prokMSA_id:403020 FJ655595.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_D7 prokMSA_id:403312 FJ655613.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_10F8 prokMSA_id:413653 FJ655670.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3D4 prokMSA_id:413719 FJ655624.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3B7 prokMSA_id:417662 FJ655583.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_A6 prokMSA_id:420912 FJ655715.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3F4 prokMSA_id:421660 FJ655635.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3F10 prokMSA_id:422516 FJ655637.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3F8 prokMSA_id:423033 FJ655582.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_A5 prokMSA_id:425335 FJ655589.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_C3 prokMSA_id:425657 FJ655640.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3G5 prokMSA_id:431452 FJ655765.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_03A3 prokMSA_id:432707 FJ655587.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_B9 prokMSA_id:435275 FJ655594.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_D3 prokMSA_id:440085 FJ655588.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_C2 prokMSA_id:441638 FJ655716.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3F5 prokMSA_id:442392 FJ655711.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3E6 prokMSA_id:443971 FJ655739.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3E10 prokMSA_id:451466 FJ655592.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_D10 prokMSA_id:454534 FJ655605.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_E8 prokMSA_id:455926 FJ655692.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3G5 prokMSA_id:458850 FJ655702.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3B6 prokMSA_id:461944 FJ982763.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMPFLSS56m_9 prokMSA_id:462098 FJ655643.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3H10 prokMSA_id:463052 FJ655601.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_C6 prokMSA_id:463341 FJ655591.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_C6 prokMSA_id:463639 FJ655607.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_H11 prokMSA_id:464364 FJ655638.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3F9 prokMSA_id:515691 GU135489.1 archaeal Lake Pavin sediment (11 cm) clone Pav-sed-509 prokMSA_id:515962 GU135494.1 archaeal Lake Pavin sediment (11 cm) clone Pav-sed-514 prokMSA_id:519027 GU135488.1 archaeal Lake Pavin sediment (11 cm) clone Pav-sed-508 prokMSA_id:525464 GU135486.1 archaeal Lake Pavin sediment (11 cm) clone Pav-sed-506 prokMSA_id:525569 GU135496.1 archaeal Lake Pavin sediment (11 cm) clone Pav-sed-516 prokMSA_id:526223 GU135481.1 archaeal Lake Pavin sediment (1 cm) clone Pav-sed-501 prokMSA_id:526250 GU135491.1 archaeal Lake Pavin sediment (11 cm) clone Pav-sed-511 prokMSA_id:529235 GU135501.1 archaeal Lake Pavin sediment (37 cm) clone Pav-sed-521 prokMSA_id:529521 GU135497.1 archaeal Lake Pavin sediment (11 cm) clone Pav-sed-517 prokMSA_id:532971 CU917128.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536733 CU917024.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538819 FJ902674.1 phreatic limestone sinkholes northeastern Mexico biomat 80m deep cenote La Palita clone LP80MA3 prokMSA_id:539714 FJ649522.1 Prokaryotic layer S1 Amsterdam Mud Volcano sapropel sediment East Mediterranean Sea clone AMSMV-S1-A28 prokMSA_id:541838 CU917124.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542488 CU916119.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543129 CU916944.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543933 CU917155.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544811 CU917091.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550073 CU916920.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550657 GU363059.1 and archaeal biogeochemical cycling genes within Qiongdongnan basin Sea: pilot study microbial shifting marine sediment South China Sea clone BD72AR46 prokMSA_id:552113 CU916196.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554791 CU916900.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558648 CU917084.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560533 CU917220.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:565507 FJ638517.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCL60a_01_12 prokMSA_id:565799 CU916918.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:568752 CU916006.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:569477 CU917080.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:570510 CU916967.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:570593 CU917205.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:570961 CU916767.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:571882 CU917186.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573509 FN428814.1 Biomarker indicators anaerobic oxidizers diffusive methane fluxes brackish-marine sediments Aarhus Bay (Henry IV/04) clone Arch44 prokMSA_id:573738 CU917213.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574752 CU916788.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575865 CU916895.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:594409 FN421235.1 Impact natural oil er hydrocarbons on microbial and activity Gulf Mexico cold seep sediments marine sediments; site GC234 water depth 550 m; isol 0-10cm sed.depth clone GoM87_Arch436 1.2.3 c__Korarchaeota 54 seqs 1.2.3.1 o__Korarchaeotales 17 seqs 1.2.3.1.1 f__Korarchaeotaceae 17 seqs 1.2.3.1.1.1 Unclassified 10 seqs 1.2.3.1.1.1.6 OTU 10 seqs prokMSA_id:141171 DQ300332.1 Archaeal and geochemical energy yields on Vulcano Island Italy geothermal well clone VulcPIw.226 prokMSA_id:142154 DQ228517.1 Predominance deeply-branching Archaea growth nascent hydrothermal chimney clone F99a104 prokMSA_id:142245 DQ228521.1 Predominance deeply-branching Archaea growth nascent hydrothermal chimney clone F99a19 prokMSA_id:143380 DQ228612.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH1a4 prokMSA_id:143992 DQ228618.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH2a50 prokMSA_id:204493 AB293207.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Fhm2A25 prokMSA_id:204824 AB293208.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Fhm2A35 prokMSA_id:208690 AB293218.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Fhm3A25 prokMSA_id:214454 AB293211.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Fhm2A74 prokMSA_id:258104 DQ925864.1 Microbes and Thermal Gradients Temperature Hydrothermal Chimneys hydrothermal vent chimneys Guaymas Basin clone 179A8 1.2.3.1.1.2 g__Candidatus Korarchaeum 7 seqs 1.2.3.1.1.2.7 OTU 7 seqs prokMSA_id:1172 L25852.1 hot spring clone pJP27 prokMSA_id:51224 AF176347.1 hot spring clone pBA5 prokMSA_id:161178 DQ465912.1 Investigation Candidate Division 'Korarchaeota Yellowstone National Park Shoshone hot spring 04YSHO041 filamentous mat clone KorY41A prokMSA_id:161411 DQ465908.1 Investigation Candidate Division 'Korarchaeota Yellowstone National Park Joseph's Coat hot spring 03YJOS038 filamentous mat clone KorY38 prokMSA_id:266718 CP000968.1 korarchaeal new evolution Archaea Candidatus Korarchaeum cryptofilum OPF8 genome prokMSA_id:278456 EU635925.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 87 C clone SSW_L4_D06 prokMSA_id:305952 EU924235.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC1_L5_G08 1.2.3.2 o__pJP78 37 seqs 1.2.3.2.8 OTU 37 seqs prokMSA_id:1173 L25303.1 hot spring clone pJP78 prokMSA_id:49873 AF255604.1 hot spring clone SRI-306 prokMSA_id:144656 DQ243756.2 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Obsidian Pool clone YNP_ObP_A42 prokMSA_id:159805 DQ465911.1 Investigation Candidate Division 'Korarchaeota Yellowstone National Park Hot Spring Basin hot spring 03YHSB042 filamentous mat clone KorY42A prokMSA_id:160320 DQ465910.1 Investigation Candidate Division 'Korarchaeota Yellowstone National Park Washburn Inkpot #1 03YWSH003 mud clone KorY03 prokMSA_id:532948 GQ228725.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 97 degrees C and pH 6.5 clone IceG13A.5a prokMSA_id:535591 GQ228768.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 83 degrees C and pH 6 clone Kam40.15a prokMSA_id:535712 GQ228726.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 97 degrees C and pH 6.5 clone IceG13A.13a prokMSA_id:576673 GQ228808.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 74 degrees C and pH 6 clone Seltun3.30a prokMSA_id:576697 GQ228795.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 74 degrees C and pH 6 clone Seltun3.10a prokMSA_id:576802 GQ228803.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 74 degrees C and pH 6 clone Seltun3.15a prokMSA_id:577618 GQ228799.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 74 degrees C and pH 6 clone Seltun3.18a prokMSA_id:577677 GQ228777.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 84 degrees C and pH 6.5 clone Kam44.4a prokMSA_id:579746 GQ228734.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 97 degrees C and pH 6.5 clone IceG13A.15a prokMSA_id:580348 GQ228727.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 97 degrees C and pH 6.5 clone IceG13A.16a prokMSA_id:580483 GQ228797.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 74 degrees C and pH 6 clone Seltun3.12a prokMSA_id:580536 GQ228766.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 83 degrees C and pH 6 clone Kam40.9a prokMSA_id:581586 GQ228728.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 97 degrees C and pH 6.5 clone IceG13A.25a prokMSA_id:582223 GQ228735.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 97 degrees C and pH 6.5 clone IceG13A.12a prokMSA_id:582792 GQ228769.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 83 degrees C and pH 6 clone Kam40.6a prokMSA_id:583317 GQ228760.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 80 degrees C and pH 6 clone Kam36.5a prokMSA_id:584423 GQ228738.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 84 degrees C and pH 5.5 clone IceG13FP.6a prokMSA_id:584640 GQ228771.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 83 degrees C and pH 6 clone Kam40.16a prokMSA_id:585050 GQ228778.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 84 degrees C and pH 6.5 clone Kam44.8a prokMSA_id:585171 GQ228779.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 84 degrees C and pH 6.5 clone Kam44.13a prokMSA_id:585434 GQ228730.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 97 degrees C and pH 6.5 clone IceG13A.30a prokMSA_id:586219 GQ228796.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 74 degrees C and pH 6 clone Seltun3.11a prokMSA_id:588213 GQ228740.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 84 degrees C and pH 5.5 clone IceG13FP.23a prokMSA_id:588532 GQ228807.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 74 degrees C and pH 6 clone Seltun3.29a prokMSA_id:588808 GQ228780.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 84 degrees C and pH 6.5 clone Kam44.27a prokMSA_id:589167 GQ228801.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 74 degrees C and pH 6 clone Seltun3.28a prokMSA_id:590044 GQ228765.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 83 degrees C and pH 6 clone Kam40.5a prokMSA_id:590075 GQ228772.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 83 degrees C and pH 6 clone Kam40.11a prokMSA_id:591505 GQ228774.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 84 degrees C and pH 6.5 clone Kam44.1a prokMSA_id:592540 GQ228770.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 83 degrees C and pH 6 clone Kam40.7a prokMSA_id:592777 GQ228800.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 74 degrees C and pH 6 clone Seltun3.25a prokMSA_id:593477 GQ228736.1 abundance Korarchaeota springs Iceland Kamchatka terrestrial hot spring 97 degrees C and pH 6.5 clone IceG13A.8a 1.2.4 c__pISA7 7 seqs 1.2.4.9 OTU 7 seqs prokMSA_id:127101 AB213102.1 hydrothermal fluid clone Papm3A51 prokMSA_id:141677 DQ228584.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone OUTa18 prokMSA_id:141995 DQ300340.1 Archaeal and geochemical energy yields on Vulcano Island Italy geothermal well clone VulcPIw.73 prokMSA_id:206806 AB293210.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Fhm2A60 prokMSA_id:211888 AB293228.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Pbsc2A26 prokMSA_id:213849 AB293217.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Fhm3A18 prokMSA_id:214838 AB293226.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Pbsc2A19 1.2.5 c__pISA9 7 seqs 1.2.5.10 OTU 7 seqs prokMSA_id:111457 AY882840.2 hot spring clone SK291 prokMSA_id:141899 DQ243777.2 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Sylvan Spring clone YNP_SSp_A70 prokMSA_id:165292 DQ833964.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK603 prokMSA_id:168514 DQ833938.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK577 prokMSA_id:176476 DQ924701.1 Microbial Population Norris Geyser Basin Yellowstone National Park Cistern Hot Spring clone BW160 prokMSA_id:194551 EF156582.1 Microbial Population Norris Geyser Basin Yellowstone National Park Koz Spring clone KOZ142 prokMSA_id:199556 DQ924703.1 Microbial Population Norris Geyser Basin Yellowstone National Park Cistern Hot Spring clone BW162 1.2.6 c__pMC2A209 103 seqs 1.2.6.11 OTU 103 seqs prokMSA_id:237 AF119128.1 deep-sea sediment clone CRA8-27cm prokMSA_id:16284 AF419642.1 Guaymas Basin hydrothermal sediment clone C1_R043 prokMSA_id:100121 AY592502.1 deep-sea mud volcano clone Napoli-2A-39; BC07-2A-39 prokMSA_id:100327 AJ578139.1 microbial mat clone BS-SR-B9 prokMSA_id:102239 AY592540.1 deep-sea mud volcano clone Napoli-3A-34; BC07-3A-34 prokMSA_id:102536 AY592241.1 deep-sea mud volcano clone Amsterdam-1A-12; BC20-1A-12 prokMSA_id:102690 AY592242.1 deep-sea mud volcano clone Amsterdam-1A-13; BC20-1A-13 prokMSA_id:102845 AY592243.1 deep-sea mud volcano clone Amsterdam-1A-14; BC20-1A-140 prokMSA_id:103496 AJ578124.1 microbial mat clone BS-K-D4 prokMSA_id:103777 AJ578126.1 microbial mat clone BS-K-F9 prokMSA_id:104332 AJ578142.1 microbial mat clone BS-SR-E2 prokMSA_id:104493 AJ578143.1 microbial mat clone BS-SR-E3 prokMSA_id:104732 AY592497.1 deep-sea mud volcano clone Napoli-2A-34; BC07-2A-34 prokMSA_id:106190 AY592230.1 deep-sea mud volcano clone Amsterdam-1A-01; BC20-1A-01 prokMSA_id:107353 AJ578114.1 marine sediments above gas hydrate clone Hyd24-Arch07b prokMSA_id:137608 AY835411.2 hydrothermal sediment clone 7B08 prokMSA_id:137840 AY835410.2 Methanogen Evidenced Methyl Coenzyme M Reductase (mcrA) Genes Hydrothermal Sediments Guaymas Basin hydrothermal sediment clone 4H08 prokMSA_id:150361 AY835408.2 Methanogen Evidenced Methyl Coenzyme M Reductase (mcrA) Genes Hydrothermal Sediments Guaymas Basin hydrothermal sediment clone 4C08 prokMSA_id:157515 DQ058814.1 Cultivation methanogens shal sediments Hydrate Ridge Oregon marine sediment clone HR-CF-014 prokMSA_id:159213 DQ397350.1 Guerrero Negro hypersaline microbial mat clone 02N1AH4 prokMSA_id:159260 DQ397349.1 Guerrero Negro hypersaline microbial mat clone 02N1AC12 prokMSA_id:159421 DQ397348.1 Guerrero Negro hypersaline microbial mat clone 02N1AD5 prokMSA_id:200619 DQ522906.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-deep-11 prokMSA_id:200877 DQ640142.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-mid-26 prokMSA_id:201237 DQ522936.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-20 prokMSA_id:201512 DQ522926.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-03 prokMSA_id:202265 DQ522942.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-30 prokMSA_id:202608 DQ640137.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-deep-16 prokMSA_id:203020 DQ522901.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-deep-01 prokMSA_id:203260 AF412942.1 archaeal component mats on coral-like structures methane seeps Black Sea crenarchaeote clone BScra15 prokMSA_id:250053 EU280185.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_A3 prokMSA_id:252568 EU280211.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_F5 prokMSA_id:257655 EU280197.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_D11 prokMSA_id:282184 EF687630.1 Biogeochemistry iron- and sulfur-precipitating microbial mats (Nile Mediterranean) sediment underneath iron-oxidizing mat Chefren mud volcano Nile Deep Sea Fan Eastern Mediterranean clone 113A61 prokMSA_id:290816 AM745251.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch49 prokMSA_id:293962 AM745255.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch96 prokMSA_id:295555 AM745244.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch81 prokMSA_id:303605 FM179848.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch66 prokMSA_id:305463 EU731741.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA06C08 prokMSA_id:306079 EU731727.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA10H04 prokMSA_id:306985 EU731862.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05F07 prokMSA_id:307084 EU731879.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA09B06 prokMSA_id:307372 EU731874.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA10C12 prokMSA_id:308360 EU731651.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA07E10 prokMSA_id:310941 EU731829.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA07A12 prokMSA_id:311085 EU731814.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA10D05 prokMSA_id:311131 EU731762.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05F04 prokMSA_id:311197 EU731849.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05D08 prokMSA_id:311465 EU731834.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA07H05 prokMSA_id:311912 EU731792.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05B07 prokMSA_id:314396 EU731765.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA09B09 prokMSA_id:316566 AM713452.1 Archaea and their activity hydrate-bearing deep subsurface Hydrate Ridge (Cascadia Margin 204) marine sediments ODP leg 204 site 1250 24 mbsf clone ODP204_30_ArchU12 prokMSA_id:319725 EU731833.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA10B03 prokMSA_id:321394 EU731746.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA04F09 prokMSA_id:321665 EU731756.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05F11 prokMSA_id:323114 AM713458.1 Archaea and their activity hydrate-bearing deep subsurface Hydrate Ridge (Cascadia Margin 204) marine sediments ODP leg 204 site 1250 24 mbsf clone ODP204_30_ArchU9 prokMSA_id:324158 EU731831.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA08H04 prokMSA_id:325180 EU731830.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA08H02 prokMSA_id:325662 EU731884.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA08C06 prokMSA_id:325721 AM713454.1 Archaea and their activity hydrate-bearing deep subsurface Hydrate Ridge (Cascadia Margin 204) marine sediments ODP leg 204 site 1250 24 mbsf clone ODP204_30_ArchU49 prokMSA_id:327680 EU731698.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05H11 prokMSA_id:328022 EU731781.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA09F10 prokMSA_id:328580 EU731805.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA10C01 prokMSA_id:329036 EU731717.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GN24N05A prokMSA_id:332134 EU731820.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA06B03 prokMSA_id:333214 EU731761.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GN26N01A prokMSA_id:333274 EU731764.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GN8H4 prokMSA_id:335047 EU731837.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA07H02 prokMSA_id:335742 EU731680.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA06B09 prokMSA_id:336520 EU731732.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05C03 prokMSA_id:336561 EU731797.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA09A06 prokMSA_id:337484 EU731655.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA04C01 prokMSA_id:337690 EU731766.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA06F09 prokMSA_id:337962 EU731850.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA03E01 prokMSA_id:338612 EU731722.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA10B09 prokMSA_id:339370 EU731794.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA04A09 prokMSA_id:341351 EU731710.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA08F05 prokMSA_id:342652 AM713453.1 Archaea and their activity hydrate-bearing deep subsurface Hydrate Ridge (Cascadia Margin 204) marine sediments ODP leg 204 site 1250 24 mbsf clone ODP204_30_ArchU33 prokMSA_id:343263 EU731740.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA06C01 prokMSA_id:343373 EU731857.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA09H01 prokMSA_id:344757 EU731769.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA07F10 prokMSA_id:345015 EU731840.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA09E12 prokMSA_id:347380 EU732021.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05H06 prokMSA_id:348121 EU731729.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA10H08 prokMSA_id:348548 EU731832.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA08H06 prokMSA_id:348720 EU910618.1 Eukaryal and Archaeal Middle Island sinkhole (Lake Huron USA) sediment clone G34 prokMSA_id:349568 EU731683.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA09G04 prokMSA_id:351297 EU731789.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA10A03 prokMSA_id:352923 AM713455.1 Archaea and their activity hydrate-bearing deep subsurface Hydrate Ridge (Cascadia Margin 204) marine sediments ODP leg 204 site 1250 24 mbsf clone ODP204_30_ArchU62 prokMSA_id:353920 EU731785.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA09H04 prokMSA_id:354230 EU731826.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GN8C12 prokMSA_id:354340 AM713456.1 Archaea and their activity hydrate-bearing deep subsurface Hydrate Ridge (Cascadia Margin 204) marine sediments ODP leg 204 site 1250 24 mbsf clone ODP204_30_ArchU41 prokMSA_id:355489 EU731859.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA06D06 prokMSA_id:355797 EU731856.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA09H02 prokMSA_id:356559 EU731726.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA10H03 prokMSA_id:379599 FJ655606.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_F5 prokMSA_id:383277 FJ655658.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3B7 prokMSA_id:397349 FJ655581.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_A3 prokMSA_id:411190 FJ655593.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_D11 prokMSA_id:528115 FJ712378.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-10-A9 prokMSA_id:539535 FN428820.1 Biomarker indicators anaerobic oxidizers diffusive methane fluxes brackish-marine sediments Aarhus Bay (Henry IV/04) clone Arch101 prokMSA_id:564250 EU420696.1 Archaeal and Kao-Mei Wetland clone KM07-Da-1-1 prokMSA_id:568129 AB525489.1 Segregated ANME-1 and -2 cold-seep marine sediments deep-sea methane seep sediment off Joetsu Japan Sea clone UT06_10_52A_10 1.2.7 c__pOWA133 4 seqs 1.2.7.12 OTU 4 seqs prokMSA_id:883 AB007303.1 hot water habitat clone pOWA133 prokMSA_id:141876 DQ228522.1 Predominance deeply-branching Archaea growth nascent hydrothermal chimney clone F99a102 prokMSA_id:215541 AB293205.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Fhm1A36 prokMSA_id:533567 GU137389.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 140m source clone PNG_TB_4B140H1_A053 1.2.8 c__pSL4 23 seqs 1.2.8.13 OTU 23 seqs prokMSA_id:838 U63341.1 hot spring clone pSL4 prokMSA_id:840 U63344.1 hot spring clone pSL78 prokMSA_id:71209 AF361214.1 hot spring clone SUBT-11 prokMSA_id:137080 AB201309.1 genome fragments uncultivated thermophilic crenarchaeotes dominating hot subsurface geothermal water Fosmid clone No.10-H-08 prokMSA_id:143630 DQ243750.1 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Obsidian Pool clone YNP_ObP_A16 prokMSA_id:143638 DQ243744.2 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Obsidian Pool clone YNP_ObP_A10 prokMSA_id:144807 DQ243749.1 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Obsidian Pool clone YNP_ObP_A153 prokMSA_id:157209 DQ490010.1 Microbial Great Boiling Spring sediment hot spring; temperature 80 C clone GBS_L2_C12 prokMSA_id:176834 EF100631.1 Prokaryotic Populations Heated Arsenic-Rich Sediments Shal Submarine Hydrothermal System Ambitle Island Papua New Guinea vent 4 transect 2.5 m source clone PNG_TB_4A2.5H4_A34 prokMSA_id:183128 EF100624.1 Prokaryotic Populations Heated Arsenic-Rich Sediments Shal Submarine Hydrothermal System Ambitle Island Papua New Guinea vent 4 transect 2.5 m source clone PNG_TB_4A2.5H2_A51 prokMSA_id:196714 EF100632.1 Prokaryotic Populations Heated Arsenic-Rich Sediments Shal Submarine Hydrothermal System Ambitle Island Papua New Guinea vent 4 transect 2.5 m source clone PNG_TB_4A2.5H4_A52 prokMSA_id:221655 AB302408.1 Japan:Nagasaki Unzen Obama clone SA1 prokMSA_id:245328 AB329825.1 Microbial southern Mariana trough hydrothermal deposits clone YS18As91 prokMSA_id:277882 EU635910.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 87 C clone SSW_L4_F01 prokMSA_id:278219 EU635913.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 77 C clone G04b_L4_D08 prokMSA_id:278348 EU635911.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 77 C clone G04b_L4_A09 prokMSA_id:278813 EU635916.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 87 C clone SSW_L4_G06 prokMSA_id:278899 EU635914.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 77 C clone SSE_L4_C01 prokMSA_id:310727 EU924220.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC3_L2_F12 prokMSA_id:321466 EU924221.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC4_L5_D07 prokMSA_id:343034 EU924222.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC4_L2_E12 prokMSA_id:560759 GU137394.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 300m source clone PNG_TB_4B300H1_A036 prokMSA_id:591374 GU137388.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 140m source clone PNG_TB_4B140H1_A057 1.2.9 c__pUWA2 24 seqs 1.2.9.14 OTU 24 seqs prokMSA_id:43314 AF325181.1 hot spring clone A1 prokMSA_id:53714 AF325186.1 hot spring clone A14 prokMSA_id:163432 DQ834103.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK851 prokMSA_id:163550 DQ834111.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK859 prokMSA_id:163604 DQ834099.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK847 prokMSA_id:164146 DQ834113.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK861 prokMSA_id:166315 DQ834104.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK852 prokMSA_id:166318 DQ834105.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK853 prokMSA_id:168244 DQ834115.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK863 prokMSA_id:168424 DQ834101.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK849 prokMSA_id:169508 DQ834109.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK857 prokMSA_id:169553 DQ834100.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK848 prokMSA_id:170838 DQ834102.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK850 prokMSA_id:172448 DQ834098.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK846 prokMSA_id:173183 DQ834114.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 2 Hot Spring clone SK862 prokMSA_id:173953 EF156535.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY170 prokMSA_id:174070 EF156496.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY131 prokMSA_id:174079 EF156490.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY125 prokMSA_id:175428 EF156534.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY169 prokMSA_id:179075 EF156491.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY126 prokMSA_id:194507 EF156498.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY133 prokMSA_id:195473 EF156497.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY132 prokMSA_id:195784 EF156495.1 Microbial Population Norris Geyser Basin Yellowstone National Park Beowulf Yel Mat clone BY130 prokMSA_id:563295 FJ797319.1 Planktonic and bottom-dwelled microbial -temperature sulfuric ponds Tatung Volcano area northern Taiwan acidic hot spring sediment clone HS4sa_21 1.3 p__Euryarchaeota 4704 seqs 1.3.1 c__ANME1 102 seqs 1.3.1.68 OTU 102 seqs prokMSA_id:30999 AF419626.1 Guaymas Basin hydrothermal sediment clone GBa2r045 prokMSA_id:68319 AF356646.1 Guaymas Basin clone G72_C65 prokMSA_id:68320 AF356644.1 Guaymas Basin clone G72_C59 prokMSA_id:68325 AF356641.1 Guaymas Basin clone G72_C3 prokMSA_id:70411 AF356640.1 Guaymas Basin clone G72_C2 prokMSA_id:70647 AF354126.1 marine sediment clone SB-17a1A11 prokMSA_id:71091 AF354137.1 marine sediment clone Eel-36a2G10 prokMSA_id:71148 AF419654.1 Guaymas Basin hydrothermal sediment clone AT_R022 prokMSA_id:74040 AF419649.1 Guaymas Basin hydrothermal sediment clone AT_R004 prokMSA_id:98928 AJ578130.1 microbial mat clone BS-M-D6 prokMSA_id:99077 AJ578131.1 microbial mat clone BS-R-A1 prokMSA_id:99238 AJ578132.1 microbial mat clone BS-R-B8 prokMSA_id:99544 AJ578134.1 microbial mat clone BS-S-D7 prokMSA_id:99700 AJ578135.1 microbial mat clone BS-S-E1 prokMSA_id:99864 AJ578136.1 microbial mat clone BS-S-E7 prokMSA_id:100177 AJ578138.1 microbial mat clone BS-S-H1 prokMSA_id:100922 AY592291.1 deep-sea mud volcano clone Amsterdam-2A-17; BC20-2A-17 prokMSA_id:101067 AJ578084.1 marine sediments above gas hydrate clone HydBeg01 prokMSA_id:101893 AJ578089.1 marine sediments above gas hydrate clone HydCal61 prokMSA_id:102902 AY714860.1 Eel River sediment clone GZfos34G5 prokMSA_id:102913 AJ578120.1 marine sediments above gas hydrate clone HydCal52 prokMSA_id:103348 AJ578123.1 microbial mat clone BS-K-411 prokMSA_id:104018 AJ578140.1 microbial mat clone BS-SR-C1-Arch prokMSA_id:104177 AJ578141.1 microbial mat clone BS-SR-D3 prokMSA_id:104223 AJ578129.1 microbial mat clone BS-M-A7 prokMSA_id:105847 AY714832.1 Eel River sediment clone GZfos1C11 prokMSA_id:142063 CR937008.1 genomes archaea mediating anaerobic oxidation fosmid library methane rich Black Sea microbial mat clone fos0128g3 prokMSA_id:156966 DQ007532.1 Multiple archaeal groups control methane emissions North Sea pockmark marine hydrocarbon seep sediment clone Tommeliten_ARCH1FL prokMSA_id:157171 DQ058804.1 Cultivation methanogens shal sediments Hydrate Ridge Oregon marine sediment clone HR-MM-004 prokMSA_id:157906 DQ058813.1 Cultivation methanogens shal sediments Hydrate Ridge Oregon marine sediment clone HR-CF-013 prokMSA_id:158318 DQ004664.1 Microbial Reduce Methane Efflux Mud Volcano Sediments Gulf Cadiz marine hydrocarbon seep sediment clone CAVMV300A952 prokMSA_id:159880 DQ521778.1 Anaerobic Methane Oxidizing ANME-1b Archaea Hypersaline Sediments Gulf Mexico sediments clone SMI1-GC205-Arc16 prokMSA_id:160470 DQ521779.1 Anaerobic Methane Oxidizing ANME-1b Archaea Hypersaline Sediments Gulf Mexico sediments clone SMI1-GC205-Arc9b prokMSA_id:160594 DQ521777.1 Anaerobic Methane Oxidizing ANME-1b Archaea Hypersaline Sediments Gulf Mexico sediments clone SMI1-GC205-Arc92 prokMSA_id:160853 DQ521783.1 Anaerobic Methane Oxidizing ANME-1b Archaea Hypersaline Sediments Gulf Mexico sediments clone SMI1-GC205-ArcRNA61 prokMSA_id:161658 DQ521780.1 Anaerobic Methane Oxidizing ANME-1b Archaea Hypersaline Sediments Gulf Mexico sediments clone SMI1-GC205-Arc78 prokMSA_id:200248 DQ522933.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-13 prokMSA_id:202161 DQ522925.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-mid-29 prokMSA_id:288612 AM745177.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Arch34 prokMSA_id:289160 AM745256.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch36 prokMSA_id:289513 AM746107.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch65 prokMSA_id:289854 AM746063.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch26 prokMSA_id:290344 AM745224.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch17 prokMSA_id:291411 AM745236.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch60 prokMSA_id:291978 AM745174.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Arch19 prokMSA_id:292036 AM745182.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch13 prokMSA_id:292038 AM745235.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch48 prokMSA_id:292238 AM745180.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Arch6 prokMSA_id:292727 AM745258.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch92 prokMSA_id:293292 AM745173.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Arch18 prokMSA_id:293305 AM745247.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch9 prokMSA_id:294549 AM745259.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch13 prokMSA_id:294945 AM745248.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch93 prokMSA_id:296828 AM745231.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch33 prokMSA_id:296864 AM746101.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch90 prokMSA_id:296905 AM745175.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Arch2 prokMSA_id:296987 AM746096.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch43 prokMSA_id:297673 AM745222.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch15 prokMSA_id:297846 AM745239.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch67 prokMSA_id:298422 AM745176.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Arch22 prokMSA_id:298432 AM746108.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch80 prokMSA_id:298618 AM745240.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch69 prokMSA_id:298686 AM746091.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch16 prokMSA_id:298765 AM746105.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch25 prokMSA_id:298966 AM746095.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch42 prokMSA_id:300206 AM746099.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch66 prokMSA_id:301612 AM746097.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch51 prokMSA_id:302401 AM746106.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch29 prokMSA_id:305372 FM179867.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch98 prokMSA_id:308427 FM179858.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch43 prokMSA_id:309452 FM179815.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch89 prokMSA_id:316889 FM179891.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch12 prokMSA_id:320517 FM179862.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch14 prokMSA_id:325686 FM179886.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch128 prokMSA_id:330769 AM713449.1 Archaea and their activity hydrate-bearing deep subsurface Hydrate Ridge (Cascadia Margin 204) marine sediments ODP leg 204 site 124954 mbsf clone ODP204_26_ArchU194 prokMSA_id:333199 AM713440.1 Archaea and their activity hydrate-bearing deep subsurface Hydrate Ridge (Cascadia Margin 204) marine sediments ODP leg 204 site 1249 54 mbsf clone ODP204_26_ArchU193 prokMSA_id:333343 FM179892.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch3 prokMSA_id:333997 AB461389.1 survey anaerobic methane-oxidizing archaea terrestrial habitats deep-sea methane seep sediment clone ANME1PC prokMSA_id:336982 FM179893.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch42 prokMSA_id:511436 FJ712394.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-30-A4 prokMSA_id:515223 FJ712368.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-5-A8 prokMSA_id:515306 FJ712388.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-25-A19 prokMSA_id:522204 FJ712374.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-5-A46 prokMSA_id:523320 FJ712384.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-25-A3 prokMSA_id:523976 FJ712396.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-30-A8 prokMSA_id:541778 AM229258.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-84-267A prokMSA_id:545517 AM404412.1 Hydrocarbon-fueled sulfate reduction can sustain long-lived tubeworm aggregations cold seeps Gulf Mexico marine sediment clone GoM_SMBush4593_Arch140 prokMSA_id:556759 AM404403.1 Hydrocarbon-fueled sulfate reduction can sustain long-lived tubeworm aggregations cold seeps Gulf Mexico marine sediment clone GoM_SMBush4593_Arch11 prokMSA_id:557353 AM404406.1 Hydrocarbon-fueled sulfate reduction can sustain long-lived tubeworm aggregations cold seeps Gulf Mexico marine sediment clone GoM_SMBush4593_Arch38 prokMSA_id:562496 AM229229.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) pure gas hydrate clone HydGH40-Arch268 prokMSA_id:564296 AM404409.1 Hydrocarbon-fueled sulfate reduction can sustain long-lived tubeworm aggregations cold seeps Gulf Mexico marine sediment clone GoM_SMBush4593_Arch26 prokMSA_id:567884 AM229231.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) pure gas hydrate clone HydGH40-Arch207 prokMSA_id:568367 FN428819.1 Biomarker indicators anaerobic oxidizers diffusive methane fluxes brackish-marine sediments Aarhus Bay (Henry IV/04) clone Arch62 prokMSA_id:572452 AM404407.1 Hydrocarbon-fueled sulfate reduction can sustain long-lived tubeworm aggregations cold seeps Gulf Mexico marine sediment clone GoM_SMBush4593_Arch47 prokMSA_id:572748 FP565147.1 Metagenome and mRNA expression analyses anaerobic archaea ANME-1 group Metagenomic fosmid libraries methanotrophic microbial mat growing Black Sea clone prokMSA_id:574075 AB525491.1 Segregated ANME-1 and -2 cold-seep marine sediments deep-sea methane seep sediment off Joetsu Japan Sea clone UT06_10_52A_05 prokMSA_id:575703 AB525477.1 Segregated ANME-1 and -2 cold-seep marine sediments deep-sea methane seep sediment off Joetsu Japan Sea clone UT06_10_52A_53 prokMSA_id:577004 AM404405.1 Hydrocarbon-fueled sulfate reduction can sustain long-lived tubeworm aggregations cold seeps Gulf Mexico marine sediment clone GoM_SMBush4593_Arch139 prokMSA_id:579028 AM404413.1 Hydrocarbon-fueled sulfate reduction can sustain long-lived tubeworm aggregations cold seeps Gulf Mexico marine sediment clone GoM_SMBush4593_Arch81 prokMSA_id:582796 AM229228.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) pure gas hydrate clone HydGH40-Arch264 prokMSA_id:588034 AM404411.1 Hydrocarbon-fueled sulfate reduction can sustain long-lived tubeworm aggregations cold seeps Gulf Mexico marine sediment clone GoM_SMBush4593_Arch48 prokMSA_id:593275 AM404404.1 Hydrocarbon-fueled sulfate reduction can sustain long-lived tubeworm aggregations cold seeps Gulf Mexico marine sediment clone GoM_SMBush4593_Arch143 1.3.2 c__Archaeoglobi 50 seqs 1.3.2.1 o__Archaeoglobales 50 seqs 1.3.2.1.1 f__Archaeoglobaceae 50 seqs 1.3.2.1.1.1 g__Archaeoglobus 50 seqs 1.3.2.1.1.1.1 Unclassified 16 seqs 1.3.2.1.1.1.1.69 OTU 16 seqs prokMSA_id:32209 AF220166.1 Ferroglobus placidus prokMSA_id:53724 AJ299217.1 Ferroglobus placidus str. AEDII12DO prokMSA_id:71588 AJ299218.1 Archaeoglobus lithotrophicus str. TF2 prokMSA_id:73240 AF220165.1 hyperthermophile isolate str. 234 prokMSA_id:104760 AB111029.1 hydrothermal fluid clone AB111029 prokMSA_id:104936 AB111488.1 hydrothermal fluid clone AB111488 prokMSA_id:213850 AB293221.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Pbsc2A03 prokMSA_id:310630 FJ216404.1 Geoglobus sp. str. SBH6 prokMSA_id:326628 EU924223.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC_1L5_G09 prokMSA_id:338213 EU924238.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC1_L5_B11 prokMSA_id:509273 FJ638523.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCL80a_02_02 prokMSA_id:510368 FJ638519.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCL60a_04_37 prokMSA_id:513533 FJ638521.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCL70a_02_02 prokMSA_id:518252 CP001899.1 Ferroglobus placidus str. DSM 10642 prokMSA_id:534414 FJ638522.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCL80a_01_01 prokMSA_id:534420 FJ638520.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCL70a_01_04 1.3.2.1.1.1.2 s__Archaeoglobus fulgidus 12 seqs 1.3.2.1.1.1.2.70 OTU 12 seqs prokMSA_id:743 X05567.1 Archaeoglobus fulgidus str. VC-16 prokMSA_id:751 AF068815.2 hydrothermal vent clone VC2.1 Arc4 prokMSA_id:755 Y00275.1 Archaeoglobus fulgidus str. VC-16 prokMSA_id:50705 NC_000917.1 Archaeoglobus fulgidus DSM 4304 prokMSA_id:138864 DQ131905.1 Archaeoglobus fulgidus str. L3 prokMSA_id:144124 DQ228616.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH2a48 prokMSA_id:279120 EU635901.1 Microbiology geochemistry great boiling and mud springs sediment hot spring; temperature 77 C clone SSE_L4_E01 prokMSA_id:553284 FN356387.1 Prokaryotic structure sulfate reducer activity -temperature reservoirs and without nitrate treatment oil production water clone Dan_Arch46 prokMSA_id:557329 FN356422.1 Prokaryotic structure sulfate reducer activity -temperature reservoirs and without nitrate treatment oil production water clone Hda_Arch32 prokMSA_id:572126 FN356382.1 Prokaryotic structure sulfate reducer activity -temperature reservoirs and without nitrate treatment oil production water clone Dan_Arch53 prokMSA_id:577361 FN356383.1 Prokaryotic structure sulfate reducer activity -temperature reservoirs and without nitrate treatment oil production water clone Dan_Arch56 prokMSA_id:584657 FN356421.1 Prokaryotic structure sulfate reducer activity -temperature reservoirs and without nitrate treatment oil production water clone Hda_Arch9 1.3.2.1.1.1.3 s__Archaeoglobus profundus 5 seqs 1.3.2.1.1.1.3.71 OTU 5 seqs prokMSA_id:753 AF068824.2 hydrothermal vent clone VC2.1 Arc36 prokMSA_id:33400 AF297529.1 Archaeoglobus profundus prokMSA_id:47919 AF322392.1 Archaeoglobus profundus prokMSA_id:71597 AJ299219.1 Archaeoglobus profundus str. AV18 prokMSA_id:572632 NR_028937.1 Archaeoglobus profundus str. AV18; DSM 5631 1.3.2.1.1.1.4 s__Archaeoglobus veneficus 17 seqs 1.3.2.1.1.1.4.72 OTU 17 seqs prokMSA_id:740 Y10011.2 Archaeoglobus veneficus str. SNP6 prokMSA_id:750 AF068814.2 hydrothermal vent clone VC2.1 Arc2 prokMSA_id:752 AF068819.2 hydrothermal vent clone VC2.1 Arc8 prokMSA_id:754 AB019735.1 hydrothermal vent clone pMC2A228 prokMSA_id:71722 AF418181.1 Archaeoglobus veneficus str. DSM 11195 prokMSA_id:71750 AF419628.1 Guaymas Basin hydrothermal sediment clone GBa1r015 prokMSA_id:108955 AB193990.1 deep-sea vent clone Sc-EA04 prokMSA_id:141193 DQ228620.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH3a5 prokMSA_id:144391 DQ228627.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone OUTa35 prokMSA_id:158889 AJ969472.1 Microbial black smoker s Mid Atlantic Ridge ecological implications rock fragments chimney deep sea hydrothermal vent field clone PICO pp37 Rainbow 25A prokMSA_id:177710 AB260052.1 Archaeoglobus sp. str. PM70-1 prokMSA_id:236391 AB274307.1 Archaeoglobus sp. str. Arc51 prokMSA_id:243223 AB274308.1 Archaeoglobus sp. str. Arc22 prokMSA_id:254455 DQ925865.1 Microbes and Thermal Gradients Temperature Hydrothermal Chimneys hydrothermal vent chimneys Guaymas Basin clone 182A11 prokMSA_id:293239 EF644840.1 genes and citrate lyase deep-sea microbial MAR Rainbow hydrothermal vent system 2305m water depth sulfide clone ROA3 prokMSA_id:557548 NR_028166.1 Archaeoglobus infectus str. Arc51; NBRC 100649 prokMSA_id:589586 NR_028831.1 Archaeoglobus veneficus str. SNP 6; DSM 11195 1.3.3 c__Halobacteria 970 seqs 1.3.3.1 o__Halobacteriales 970 seqs 1.3.3.1.1 f__Halobacteriaceae 970 seqs 1.3.3.1.1.1 Unclassified 135 seqs 1.3.3.1.1.1.73 OTU 135 seqs prokMSA_id:639 AB012051.1 alkaline saltern clone MSP9 prokMSA_id:649 AB012049.1 alkaline saltern clone MSP1 prokMSA_id:650 AB012052.1 alkaline saltern clone MSP11 prokMSA_id:651 AB012053.1 alkaline saltern clone MSP12 prokMSA_id:653 AB012055.1 alkaline saltern clone MSP16 prokMSA_id:654 AB012056.1 alkaline saltern clone MSP17 prokMSA_id:655 AB012057.1 alkaline saltern clone MSP22 prokMSA_id:656 AB012058.1 alkaline saltern clone MSP23 prokMSA_id:665 AB004878.1 Haloterrigena turkmenica str. VKM B-1734 prokMSA_id:690 D50850.1 Haloarcula mukohataei prokMSA_id:24766 AB023426.1 Natrinema versiforme str. XF10 prokMSA_id:27978 AB073365.1 Halobacterium sp. str. NCIMB 763 prokMSA_id:30847 AF424771.1 municipal wastewater sludge clone 38B-1 prokMSA_id:32775 AF424774.1 municipal wastewater sludge clone 41-1 prokMSA_id:33887 X92171.1 soda lake isolate 82M4 prokMSA_id:34918 D87970.1 Natronobacterium gregoryi str. NCIMB2189 prokMSA_id:36299 AB073366.1 Halobacterium sp. str. NCIMB 763 prokMSA_id:37730 AF333759.2 Halobacteriaceae gen. sp. str. 56 prokMSA_id:39652 AJ270244.1 haloarchaeon str. BbpA.3 prokMSA_id:40112 AF478471.1 Halobacteriaceae gen. sp. str. H1 prokMSA_id:42829 AJ276863.1 Greece isolate str. PalaeII prokMSA_id:47968 AJ270242.1 haloarchaeon str. T1.3 prokMSA_id:58987 AY055733.1 Haloterrigena thermotolerans str. H13 prokMSA_id:100168 AY498645.2 cf. Natronomonas pharaonis isolate str. CSW8.8.11 prokMSA_id:103164 AB125106.1 Natronoliminobium baerhuense str. IHC-005 prokMSA_id:103307 AB125107.1 Natronoliminobium baerhuense str. IHC-010 prokMSA_id:103455 AB125108.1 Natronoliminobium innermongolium str. N-1311 prokMSA_id:104488 AY498650.1 cf. Halogeometricum borinquense isolate str. CSW2.24.4 prokMSA_id:114763 AJ878084.1 Natronobacterium sp. 2-24-8 prokMSA_id:114830 AJ878077.1 Natronobacterium sp. 2-24-1 prokMSA_id:118101 AY994201.1 salted anchovies isolate str. 4R prokMSA_id:133970 DQ103672.1 hypersaline endoevaporitic microbial mat clone ArcH05 prokMSA_id:134630 AY987830.1 Halogeometricum sp. 5Sa3 prokMSA_id:136097 DQ103677.1 hypersaline endoevaporitic microbial mat clone ArcF12 prokMSA_id:140077 CR936257.1 Natronomonas pharaonis str. DSM 2160 = Gabara prokMSA_id:140276 NC_007426.1 Natronomonas pharaonis 2160 str. DSM 2160; Gabara prokMSA_id:147290 DQ309081.1 Natronococcus sp. str. F30AI prokMSA_id:148382 DQ309079.2 Natrinema sp. str. A85 prokMSA_id:150915 DQ373053.1 Natronococcus sp. str. D50 prokMSA_id:152976 DQ367241.2 Haloterrigena sp. AX-7 prokMSA_id:153150 DQ373052.1 Natrinema sp. str. B19 prokMSA_id:153298 DQ373055.1 Natronococcus sp. str. D58A prokMSA_id:153938 DQ373054.1 Natronococcus sp. str. E7 prokMSA_id:155548 DQ373050.1 Natrinema sp. str. D74 prokMSA_id:156585 DQ432466.1 prokaryotic alkaline hypersaline lakes Wadi Natrun Egypt Lake Fazda sediment clone WN-FSA-68 prokMSA_id:156685 DQ432493.1 prokaryotic alkaline hypersaline lakes Wadi Natrun Egypt Lake Fazda sediment clone WN-FSA-144 prokMSA_id:156899 DQ432492.1 prokaryotic alkaline hypersaline lakes Wadi Natrun Egypt Lake Fazda sediment clone WN-FSA-54 prokMSA_id:156901 DQ432514.1 prokaryotic alkaline hypersaline lakes Wadi Natrun Egypt Lake Fazda water clone WN-FWA-110 prokMSA_id:156925 DQ432521.1 prokaryotic alkaline hypersaline lakes Wadi Natrun Egypt Lake Fazda water clone WN-FWA-123 prokMSA_id:161212 AM268114.1 Halopiger xhanaduii str. SH-6 prokMSA_id:184676 EF127644.1 Combined use cultivation-dependent and cultivation methods indicates that members haloarchaeal groups Australian crystallizer pond are cultivable cf. Natronomonas pharaonis isolate CSW4.03.5haloarchaeon str. CSW4.03.5 prokMSA_id:194685 EF055454.1 Halosarcina vepailidus str. BZ256 prokMSA_id:201202 AB291217.1 Traditional Japanese-style field halobacterial strains that can survive 0.5% salt solution soil isolate 7-2haloarchaeon str. Nie 7-2 prokMSA_id:201232 AB291216.1 Traditional Japanese-style field halobacterial strains that can survive 0.5% salt solution soil isolate 7-1haloarchaeon str. Nie 7-1 prokMSA_id:216813 AM285297.2 Haloterrigena sp. str. FP1 prokMSA_id:221900 EF459702.1 Prokaryotic Hypersaline Inland Turkey Tuz Lake (hypersaline ) clone 1-39A prokMSA_id:231352 EF576805.1 Prokaryotic Hypersaline Inland Turkey Tuz Lake (hypersaline ) clone 8.38 prokMSA_id:235362 EF690601.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_46 prokMSA_id:239547 EF645690.1 Halomicrobium mukohataei DSM 12286 str. JCM9738 prokMSA_id:239987 AY647219.1 Strain new extremely halophilic archaea Dead Sea isolate L1Halobacteriaceae str. L1 prokMSA_id:241033 EF690611.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_56 prokMSA_id:241352 EF690602.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_47 prokMSA_id:242281 EF690607.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_52 prokMSA_id:243289 EF690584.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_29 prokMSA_id:244042 EF690614.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_59 prokMSA_id:245264 EF690558.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_03 prokMSA_id:245569 EF690570.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_15 prokMSA_id:249755 EF690603.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_48 prokMSA_id:253039 EF690634.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_79 prokMSA_id:254043 EF690581.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_26 prokMSA_id:255010 EF690630.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_75 prokMSA_id:256597 EF690618.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_63 prokMSA_id:257477 EF690588.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_33 prokMSA_id:260982 AM942763.1 Haloterrigena salina str. XH-65 prokMSA_id:270529 EF533958.1 Haloarchaea and halophilic two hypersaline soils Jiangsu Province China saltern soil clone YA46 prokMSA_id:304972 CU467261.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:305424 CU467228.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:308921 CU467260.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:309225 CU467225.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:309287 EU722658.1 Microbial athalassohaline Tirez lagoon (Spain) sediment clone SA59 prokMSA_id:312709 AB457580.1 extreme halophile order Halobacteriales Halophilic isolate 294-194-5halophilic str. 294-194-5 prokMSA_id:312714 CU467267.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:316294 CU467265.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:319392 CU467246.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:321800 CU467239.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:322115 CU467247.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:324440 EU887284.2 halophilic archaea marine solar salterns eastern China soil isolate RO5-2Halobacteriaceae str. RO5-2 prokMSA_id:325744 CU467229.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:325843 EU722669.1 Microbial athalassohaline Tirez lagoon (Spain) sediment clone SA29 prokMSA_id:329769 EU722681.1 Microbial athalassohaline Tirez lagoon (Spain) sediment clone SA64 prokMSA_id:330299 EU722680.1 Microbial athalassohaline Tirez lagoon (Spain) sediment clone SA62 prokMSA_id:330454 EU722657.1 Microbial athalassohaline Tirez lagoon (Spain) sediment clone SA31 prokMSA_id:335194 EU722679.1 Microbial athalassohaline Tirez lagoon (Spain) sediment clone SA78 prokMSA_id:335260 CU467268.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:336565 CU467259.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:337881 EU722678.1 Microbial athalassohaline Tirez lagoon (Spain) sediment clone SA65 prokMSA_id:340382 FJ172060.1 Microbial athalassohaline Tirez lagoon (Spain) water clone MJ59 prokMSA_id:343162 CU467235.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:345941 CU467263.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:348206 EU887283.2 halophilic archaea marine solar salterns eastern China soil isolate RO2-11Halobacteriaceae str. RO2-11 prokMSA_id:355446 CU467255.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:356154 CU467234.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:361176 EU308272.1 Halogeometricum sp. str. 50C25 prokMSA_id:459227 FJ944014.1 Halophilic archaea salterns eastern China Rudong marine solar saltern near Yel Sea isolate RO3-11Halobacteriaceae str. RO3-11 prokMSA_id:464512 FJ944013.1 Halophilic archaea salterns eastern China Rudong marine solar saltern near Yel Sea isolate RO5-14Halobacteriaceae str. RO5-14 prokMSA_id:526500 CP001688.1 Halomicrobium mukohataei str. DSM 12286 prokMSA_id:532662 AB477974.1 Halopiger xanaduensis str. JCM 14033 prokMSA_id:533414 FN391204.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone 209ZC04 prokMSA_id:536949 FN391283.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1E051 prokMSA_id:539832 FN391278.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1H021 prokMSA_id:540673 FN391291.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1D081 prokMSA_id:541455 FN391280.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1C051 prokMSA_id:541727 EU887286.2 Halosarcina sp. str. RO1-4 prokMSA_id:545129 GQ282621.1 Halophilic archaea salterns eastern China sediment Taibei marine solar saltern isolate TNN28Halobacteriaceae str. TNN28 prokMSA_id:545708 FN391183.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone 209ZH03 prokMSA_id:546023 FJ686121.1 Halovivax sp. str. B45 prokMSA_id:548238 AM947492.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1F121 prokMSA_id:551722 GU339303.1 Halophilic archaea salterns eastern China Lainyungang Taibei artificial marine solar saltern isolate TBN19Halobacteriaceae str. TBN19 prokMSA_id:554657 FN391197.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone 209ZB06 prokMSA_id:555695 NR_028190.1 Haloterrigena salina str. XH-65; JCM 13891 prokMSA_id:561528 AB454052.1 Halophilic note: operon isolate YSM-129halophilic str. YSM-129 prokMSA_id:570298 FJ889134.1 Halogranum rubrum str. HO2-1 prokMSA_id:571613 AB477980.1 Halosarcina pallida str. JCM 14848 prokMSA_id:573412 GQ282622.1 Halophilic archaea salterns eastern China sediment Taibei marine solar saltern isolate TNN50Halobacteriaceae str. TNN50 prokMSA_id:573494 FN391282.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1F101 prokMSA_id:576101 AB454053.1 Halophilic note: rrnB operon isolate YSM-129halophilic str. YSM-129 prokMSA_id:577031 FN594946.2 Haloferax sp. str. B-4 prokMSA_id:579021 GQ478068.1 Haloferax sp. str. CT3-3 prokMSA_id:581896 FN594944.2 Haloferax sp. str. B-1 prokMSA_id:584819 AB533256.1 extreme halophile order Halobacteriales Halophilic rrnB operon isolate 294-194-5halophilic str. 294-194-5 prokMSA_id:585278 FN594945.2 Haloferax sp. str. B-3 prokMSA_id:587671 GQ443609.1 Halosarcina sp. str. RO1-64 prokMSA_id:591811 GQ282619.1 Halophilic archaea salterns eastern China sediment Taibei marine solar saltern isolate TNN10Halobacteriaceae str. TNN10 prokMSA_id:591975 GU208828.2 Halophilic archaea marine salterns eastern China Lainyungang Taibei solar saltern isolate TBN53Halobacteriaceae str. TBN53 prokMSA_id:592430 GQ478077.1 Haloferax sp. str. CT4-7 1.3.3.1.1.10 g__Halomicrobium 9 seqs 1.3.3.1.1.10.1 Unclassified 6 seqs 1.3.3.1.1.10.1.90 OTU 6 seqs prokMSA_id:125425 AY994196.1 Haloarcula sp. str. Q6 prokMSA_id:149748 DQ309091.1 Halomicrobium sp. str. A191 prokMSA_id:222998 EF533994.1 Halomicrobium katae str. Al-5 prokMSA_id:263217 EU409597.1 Halomicrobium katae str. K-1 prokMSA_id:337957 EU722674.1 Microbial athalassohaline Tirez lagoon (Spain) sediment clone SA93 prokMSA_id:547797 FJ897725.1 Halomicrobium sp. str. Bet58 1.3.3.1.1.10.2 s__Halomicrobium mukohataei 3 seqs 1.3.3.1.1.10.2.91 OTU 3 seqs prokMSA_id:245441 EF645691.1 Halomicrobium mukohataei DSM 12286 str. JCM9738 prokMSA_id:526502 CP001688.1 Halomicrobium mukohataei str. DSM 12286 prokMSA_id:565824 CP001689.1 Halomicrobium mukohataei str. DSM 12286 1.3.3.1.1.11 g__Haloplanus 7 seqs 1.3.3.1.1.11.1 Unclassified 4 seqs 1.3.3.1.1.11.1.92 OTU 4 seqs prokMSA_id:132815 DQ103676.1 hypersaline endoevaporitic microbial mat clone ArcG01 prokMSA_id:156718 DQ432015.1 undisclosed oilfield isolate G76.1G76.1 str. G76.1 prokMSA_id:275320 EF533950.1 Haloarchaea and halophilic two hypersaline soils Jiangsu Province China saltern soil clone LA52 prokMSA_id:574256 AB477975.1 Haloplanus natans str. JCM 14081 1.3.3.1.1.11.2 s__Haloplanus natans 3 seqs 1.3.3.1.1.11.2.93 OTU 3 seqs prokMSA_id:151880 DQ417339.2 Haloplanus natans str. RE 101 prokMSA_id:154587 DQ417340.2 Haloplanus natans str. RE-102 prokMSA_id:156365 DQ417341.2 Haloplanus natans str. RE-103 1.3.3.1.1.12 g__Haloquadratum 57 seqs 1.3.3.1.1.12.1 Unclassified 49 seqs 1.3.3.1.1.12.1.94 OTU 49 seqs prokMSA_id:39318 X84331.1 hypersaline clone X84331 prokMSA_id:43013 X84084.1 hypersaline clone X84084 prokMSA_id:104686 AY498639.1 related to SHOW group clone CSWFA061 prokMSA_id:130487 DQ103682.1 hypersaline endoevaporitic microbial mat clone ArcA11 prokMSA_id:131295 AY987832.1 Microbial Salterns Maras salterns clone 5A1 prokMSA_id:132978 AY987831.1 Microbial Salterns Maras salterns clone 2A5 prokMSA_id:134188 AY987833.1 Microbial Salterns Maras salterns clone 5A7 prokMSA_id:134687 AY987834.1 Microbial Salterns Maras salterns clone 7A11 prokMSA_id:134713 AY987835.1 Microbial Salterns Maras salterns clone 7A8 prokMSA_id:218990 EF459728.1 Prokaryotic Hypersaline Inland Turkey Tuz Lake (hypersaline ) clone 3-09A prokMSA_id:219070 EF459726.1 Prokaryotic Hypersaline Inland Turkey Tuz Lake (hypersaline ) clone 1-13A prokMSA_id:223218 EF459727.1 Prokaryotic Hypersaline Inland Turkey Tuz Lake (hypersaline ) clone 3-03A prokMSA_id:225494 EF459729.1 Prokaryotic Hypersaline Inland Turkey Tuz Lake (hypersaline ) clone 3-46A prokMSA_id:306701 CU467196.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:307707 CU467183.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:309109 CU467200.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:309670 CU467209.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:311227 CU467210.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:311457 CU467192.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:316305 CU467224.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:318426 CU467202.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:318505 CU467216.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:320909 CU467206.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:320960 CU467203.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:322155 CU467190.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:323967 CU467218.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:324793 CU467222.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:324838 CU467205.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:325081 CU467179.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:326016 CU467177.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:330669 CU467185.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:333138 CU467181.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:337408 CU467187.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:338136 CU467195.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:341327 CU467201.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:344047 CU467220.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:344123 CU467215.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:345179 CU467191.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:345209 CU467204.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:349697 CU467217.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:350399 CU467188.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:350806 CU467211.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:351010 CU467221.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:355470 CU467176.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:356163 CU467194.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:533668 AM947440.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1D061 prokMSA_id:536361 FN391221.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1H111 prokMSA_id:546382 AM947441.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1G041 prokMSA_id:561162 AM947445.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1H071 1.3.3.1.1.12.2 s__Haloquadratum walsbyi 8 seqs 1.3.3.1.1.12.2.95 OTU 8 seqs prokMSA_id:100448 AY676200.1 Haloquadra walsbyi C23 prokMSA_id:146264 DQ314493.1 'Haloquadratum walsbyi' crystallizer indicates large pool accessory genes otherwise coherent species solar saltern prokMSA_id:147235 DQ314494.1 'Haloquadratum walsbyi' crystallizer indicates large pool accessory genes otherwise coherent species solar saltern prokMSA_id:160955 AM180088.1 Haloquadratum walsbyi str. strain: DSM 16790 = HBSQ001 prokMSA_id:160956 AM180088.1 Haloquadratum walsbyi str. strain: DSM 16790 = HBSQ001 prokMSA_id:169691 NC_008212.1 Haloquadratum walsbyi str. strain: DSM 16790 = HBSQ001 prokMSA_id:169692 NC_008212.1 Haloquadratum walsbyi str. strain: DSM 16790 = HBSQ001 prokMSA_id:533983 NR_028207.1 Haloquadratum walsbyi str. C23; DSM 16854 1.3.3.1.1.13 g__Halorhabdus 5 seqs 1.3.3.1.1.13.1 Unclassified 1 seq 1.3.3.1.1.13.1.96 OTU 1 seq prokMSA_id:247483 EF690613.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_58 1.3.3.1.1.13.2 s__Halorhabdus utahensis 4 seqs 1.3.3.1.1.13.2.97 OTU 4 seqs prokMSA_id:696 AF071880.1 Halorhabdus utahensis str. AX-2 prokMSA_id:241461 EF127229.1 Halorhabdus tiamatea str. SARL4B prokMSA_id:531181 CP001687.1 Halorhabdus utahensis str. DSM 12940 prokMSA_id:548037 NR_028172.1 Halorhabdus utahensis str. AX-2; DSM12940 1.3.3.1.1.14 g__Halorubrum 227 seqs 1.3.3.1.1.14.1 Unclassified 208 seqs 1.3.3.1.1.14.1.98 OTU 208 seqs prokMSA_id:612 L00922.1 Halobacterium sp.Ch2 prokMSA_id:613 D32081.1 Halobacterium sp. AUS-1 prokMSA_id:614 AJ002944.1 Halorubrum sp. str. GSL5.48 prokMSA_id:615 D63572.1 Halorubrum str. JCM9100 prokMSA_id:616 X82168.1 Halorubrum trapanicum str. NRC 34021 prokMSA_id:617 D32082.2 Halobacterium sp. AUS-2 prokMSA_id:618 X82169.1 Halorubrum sodomense str. ATCC 33755 prokMSA_id:624 X82167.1 Halorubrum saccharovorum str. NCIMB 2081 prokMSA_id:625 U17364.1 Halorubrum saccharovorum prokMSA_id:626 D87972.1 Halorubrum vacuolatum str. JCM9060 prokMSA_id:21492 AJ270248.1 haloarchaeon str. PW1.1 prokMSA_id:23129 AJ270251.1 haloarchaeon str. 54R prokMSA_id:35867 AJ270246.1 haloarchaeon str. MAlk006.3 prokMSA_id:38950 AJ270245.1 haloarchaeon str. GluBr1.1 prokMSA_id:43177 AJ400624.1 halophilic isolate str. NaxosII prokMSA_id:71191 D13379.1 Halorubrum sodomense str. ATCC33755 prokMSA_id:99383 AY498640.1 cf. Halorubrum sodomense clone CSWFA042 prokMSA_id:99537 AY498641.1 related to ADL group isolate str. CSW1.15.5 prokMSA_id:99692 AY498642.1 cf. Halorubrum sodomense isolate str. CSW2.25.5 prokMSA_id:99857 AY498643.1 cf. Halorubrum sodomense isolate str. CSW4.05.5 prokMSA_id:100008 AY498644.1 cf. Halorubrum sodomense isolate str. CSW4.11.5 prokMSA_id:100321 AY498646.1 related to ADL group isolate str. CSW2.27.5 prokMSA_id:100481 AY498647.1 cf. Halorubrum saccharovorum isolate str. CSW5.28.5 prokMSA_id:100634 AY498648.1 related to ADL group isolate str. CSW6.14.5 prokMSA_id:100790 AY498649.1 cf. Halorubrum saccharovorum isolate str. CSW4.22.4 prokMSA_id:101890 AB090169.1 Halorubrum terrestre str. VKM B-1739 prokMSA_id:102970 AY510707.1 Halorubrum xinjiangense str. BD-1 prokMSA_id:109406 AY826412.1 Halobacterium sp. str. XH3 prokMSA_id:124714 AY994197.1 Halorubrum xinjiangense str. C3 prokMSA_id:133898 AY987829.1 Halobacterium sp. 7Sb5 prokMSA_id:138107 DQ118426.1 Halorubrum ezzemoulense str. 5'1 prokMSA_id:145217 DQ309086.1 Halorubrum sp. str. F42A prokMSA_id:146342 DQ309089.1 Halorubrum sp. str. A87B prokMSA_id:146968 DQ355813.2 Halorubrum sp. str. 31-hong prokMSA_id:147732 DQ309087.1 Halorubrum sp. str. F23A prokMSA_id:147933 DQ309090.1 Halorubrum sp. str. F100 prokMSA_id:148076 DQ309088.1 Halorubrum sp. str. A29 prokMSA_id:149949 DQ355793.2 Halorubrum sp. str. AJ201 prokMSA_id:151460 DQ373061.1 Halorubrum sp. str. C35 prokMSA_id:151829 AM235786.1 Halorubrum orientalis str. EJ-52 prokMSA_id:155268 DQ373060.1 Halorubrum sp. str. B36 prokMSA_id:155683 DQ373059.1 Halorubrum sp. str. D1A prokMSA_id:156610 DQ432517.1 prokaryotic alkaline hypersaline lakes Wadi Natrun Egypt Lake Fazda water clone WN-FWA-118 prokMSA_id:156649 DQ432494.1 prokaryotic alkaline hypersaline lakes Wadi Natrun Egypt Lake Fazda sediment clone WN-FSA-147 prokMSA_id:156659 DQ432016.1 undisclosed oilfield isolate G76.4G76.4 str. G76.4 prokMSA_id:156872 DQ458845.1 Halorubrum sp. str. YT245 prokMSA_id:156969 DQ432020.1 USA: Utah Great Salt Lake isolate GSL1DGSL1D str. GSL1D prokMSA_id:156989 DQ432019.1 USA: Utah Great Salt Lake isolate GSL1AGSL1A str. GSL1A prokMSA_id:156991 DQ432518.1 prokaryotic alkaline hypersaline lakes Wadi Natrun Egypt Lake Fazda water clone WN-FWA-120 prokMSA_id:160319 AM268115.1 Halorubrum sp. str. EN-2 prokMSA_id:169555 DQ822454.1 Halorubrum sp. str. CGSA-14 prokMSA_id:174007 DQ987878.1 Halorubrum sp. str. HEN2-25 prokMSA_id:176943 EF077636.1 Halorubrum koreense str. B6 prokMSA_id:177223 EF077635.1 Halorubrum kribbense str. A33 prokMSA_id:179945 AM412370.1 Halorubrum saccharovorum BJB11 prokMSA_id:181679 EF108328.1 Halorubrum sp. str. AJ201 prokMSA_id:181895 AM048786.2 Halorubrum sp. HALO-G* prokMSA_id:182928 DQ987879.1 Halorubrum sp. str. HEN2-39 prokMSA_id:184601 EF077637.1 Halorubrum halophilum str. B8 prokMSA_id:185642 EF077641.1 Halorubrum alimentarium str. B43 prokMSA_id:185706 EF194097.1 Halorubrum sp. str. CGSA-42 prokMSA_id:187435 EF090605.1 Combined use cultivation-dependent and cultivation methods indicates that members haloarchaeal groups Australian crystallizer pond are cultivable Australia isolate CSW5.24.4haloarchaeon str. CSW5.24.4 prokMSA_id:190096 EF077640.3 Halorubrum cibarium str. B40 prokMSA_id:190570 EF077638.1 Halorubrum halotolerans str. B23 prokMSA_id:190922 EF077639.1 Halorubrum cibi str. B31 prokMSA_id:191035 EF028067.2 Halorubrum fuqingense prokMSA_id:192430 DQ987877.2 Halorubrum sp. str. CGSA15 prokMSA_id:193349 EF139654.1 Halorubrum californiensis str. SF3 213 prokMSA_id:195245 AM412371.1 Halorubrum saccharovorum BJ1A4 prokMSA_id:198541 EF077634.3 Halorubrum jeotgali str. A30 prokMSA_id:199963 DQ138366.1 Halorubrum constantinense str. 1'2 prokMSA_id:209464 AM491830.1 Halorubrum sp. str. EJ-32 prokMSA_id:218253 EF459704.1 Prokaryotic Hypersaline Inland Turkey Tuz Lake (hypersaline ) clone 3-04A prokMSA_id:218702 EF488827.1 Halorubrum africanae str. S7 prokMSA_id:220293 EF468473.1 Halorubrum tebenquichense str. JCM12290 prokMSA_id:230222 AB305327.1 Halorubrum sp. str. Slt1 prokMSA_id:254192 EF660746.1 Halorubrum daejeonense str. D24 prokMSA_id:254997 AM900832.1 Halorubrum sp. str. BG-1 prokMSA_id:259883 EF533957.1 Haloarchaea and halophilic two hypersaline soils Jiangsu Province China saltern soil clone YA39 prokMSA_id:264072 EU562182.1 Halorubrum aidingense str. JNPH_3 prokMSA_id:265460 EF533956.1 Haloarchaea and halophilic two hypersaline soils Jiangsu Province China saltern soil clone YA32 prokMSA_id:268311 EF533952.1 Haloarchaea and halophilic two hypersaline soils Jiangsu Province China saltern soil clone YA1 prokMSA_id:306672 CU467119.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:307208 CU467159.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:307588 CU467144.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:307671 CU467123.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:311092 CU467171.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:312469 CU467244.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:313264 CU467137.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:313502 CU467135.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:314458 CU467149.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:315111 EU731592.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA02C08 prokMSA_id:316692 CU467157.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:318034 CU467140.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:318263 CU467168.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:318497 CU467113.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:318731 CU467141.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:319084 CU467134.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:319500 CU467132.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:319579 CU467124.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:320196 CU467126.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:321188 FJ267614.1 Halorubrum sp. str. CY prokMSA_id:321196 CU467213.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:323093 CU467160.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:323576 FJ172055.1 Microbial athalassohaline Tirez lagoon (Spain) water clone MJ23 prokMSA_id:325053 CU467170.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:325385 CU467250.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:325463 CU467248.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:326146 CU467161.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:327649 CU467145.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:327833 CU467156.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:329083 CU467133.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:329207 EU722675.1 Microbial athalassohaline Tirez lagoon (Spain) sediment clone SA90 prokMSA_id:329469 FJ172057.1 Microbial athalassohaline Tirez lagoon (Spain) water clone MJ34 prokMSA_id:330809 CU467173.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:331397 CU467231.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:331433 FJ042667.1 Halorubrum sp. str. s1-1 prokMSA_id:333735 EU722676.1 Microbial athalassohaline Tirez lagoon (Spain) sediment clone SA60 prokMSA_id:335012 CU467146.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:335114 CU467117.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:336846 CU467163.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:339432 CU467139.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:339586 CU467152.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:340718 CU467162.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:340992 CU467125.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:341290 CU467147.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:341471 CU467122.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:341728 CU467151.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:342722 CU467172.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:343109 CU467241.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:343918 CU467165.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:343971 FJ172054.1 Microbial athalassohaline Tirez lagoon (Spain) water clone MJ18 prokMSA_id:344263 CU467121.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:345051 CU467232.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:346670 CU467158.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:347966 FJ172053.1 Microbial athalassohaline Tirez lagoon (Spain) water clone MJ16 prokMSA_id:348103 CU467150.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:348463 FJ172058.1 Microbial athalassohaline Tirez lagoon (Spain) water clone MJ36 prokMSA_id:348991 CU467130.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:349206 CU467166.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:354350 CU467169.1 Prokaryotic Tunisian saltern Saltern solar multipond clone prokMSA_id:355910 FJ172059.1 Microbial athalassohaline Tirez lagoon (Spain) water clone MJ51 prokMSA_id:442591 GQ182978.1 Halorubrum tebenquichense prokMSA_id:514386 GU361123.1 Halorubrum sp. str. Beja5 prokMSA_id:519034 GU361136.1 Halorubrum sp. str. Bet512 prokMSA_id:520270 GU361140.1 Halorubrum sp. str. MG25 prokMSA_id:520818 GU361143.1 Halorubrum sp. str. MG526 prokMSA_id:524244 GU361142.1 Halorubrum sp. str. MG525 prokMSA_id:525271 GU361141.1 Halorubrum sp. str. MG215 prokMSA_id:526061 GU361135.1 Halorubrum sp. str. Bet217 prokMSA_id:529599 GU361133.1 Halorubrum sp. str. Bet25 prokMSA_id:530712 GU361139.1 Halorubrum sp. str. MG23 prokMSA_id:534650 FN391233.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1B091 prokMSA_id:534861 FN391248.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1D021 prokMSA_id:536159 AM947466.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1A071 prokMSA_id:536970 FN391223.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1G031 prokMSA_id:537068 FN391196.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone 209ZA10 prokMSA_id:537394 FN391190.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone 209ZB08 prokMSA_id:537698 AM947483.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1G101 prokMSA_id:539916 FJ685652.1 Halorubrum sp. str. PV6 prokMSA_id:539942 AM947455.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1G051 prokMSA_id:540987 AB477979.1 Halorubrum trapanicum str. JCM 10477 prokMSA_id:541712 AM947485.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1D071 prokMSA_id:541818 FN391263.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1G101 prokMSA_id:542810 AM947453.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1C101 prokMSA_id:542848 GQ181210.1 Halorubrum sp. str. Ez228 prokMSA_id:543234 GQ478057.1 Halorubrum sp. str. AS2-2 prokMSA_id:543335 AM947469.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1F011 prokMSA_id:544232 AM947479.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1B061 prokMSA_id:545496 GQ478059.1 Halorubrum sp. str. AS2-17 prokMSA_id:547595 FJ793266.1 Halorubrum sp. str. GS1 prokMSA_id:548300 FN391289.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1F111 prokMSA_id:548419 NR_028205.1 Halorubrum xinjiangense str. BD-1; JCM 12388 prokMSA_id:549011 AM947465.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1H081 prokMSA_id:549430 AM947486.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1G031 prokMSA_id:549938 FN391266.2 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1D101 prokMSA_id:550787 AM947452.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1G091 prokMSA_id:550849 FN391184.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone 209ZD06 prokMSA_id:552864 GQ225091.1 Halorubrum sp. str. EzS2 prokMSA_id:553600 FN391187.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone 209ZD02 prokMSA_id:553868 FN391258.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1H081 prokMSA_id:554998 GQ478052.1 Halorubrum sp. str. AS2-5 prokMSA_id:556420 NR_028230.1 Halorubrum litoreum str. Fa-1; JCM 13561 prokMSA_id:559445 AM947457.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1E011 prokMSA_id:559735 FJ696376.1 Halorubrum sp. str. GSP100 prokMSA_id:562217 FN391216.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone 209ZB01 prokMSA_id:562358 GQ478054.1 Halorubrum sp. str. AS2-3 prokMSA_id:562716 GQ181209.1 Halorubrum sp. str. Ez26 prokMSA_id:564041 AM947472.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1H051 prokMSA_id:566259 NR_028224.1 Halorubrum vacuolatum str. JCM 9060 prokMSA_id:566362 GQ478055.1 Halorubrum sp. str. AS2-11 prokMSA_id:566409 FN391251.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1E101 prokMSA_id:566629 AM947474.1 Microbial crystals processed Mediterranean seawater based on salt crystal Tunisian solar saltern clone SFG1C081 prokMSA_id:567574 GQ250584.1 Halorubrum sp. str. EzA1 prokMSA_id:569909 NR_028226.1 Halorubrum arcis str. AJ201; JCM 13916 prokMSA_id:570488 FN391224.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1F091 prokMSA_id:571952 GQ225086.1 Halorubrum sp. str. Ez5-1 prokMSA_id:572855 GQ478051.1 Halorubrum sp. str. AS2-7 prokMSA_id:574253 FN391228.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1B031 prokMSA_id:575398 FN391231.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1A091 prokMSA_id:576020 FN391250.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1A061 prokMSA_id:579111 GQ478078.1 Halorubrum sp. str. CS4-4 prokMSA_id:581025 GQ478058.1 Halorubrum sp. str. AS2-14 prokMSA_id:585423 GQ478060.1 Halorubrum sp. str. CS1-2 prokMSA_id:585943 GQ181211.1 Halorubrum sp. str. L56 prokMSA_id:586865 GQ181212.1 Halorubrum sp. str. Eza4 prokMSA_id:592890 GQ478053.1 Halorubrum sp. str. AS2-6 prokMSA_id:594197 GQ181207.1 Halorubrum sp. str. Ez59 1.3.3.1.1.14.2 s__Halorubrum alkaliphilum 6 seqs 1.3.3.1.1.14.2.99 OTU 6 seqs prokMSA_id:103121 AY510708.1 Halorubrum alkaliphilum str. DZ-1 prokMSA_id:112125 AY864781.1 Halorubrum alkaliphilum M12 prokMSA_id:156934 DQ432468.1 prokaryotic alkaline hypersaline lakes Wadi Natrun Egypt Lake Fazda sediment clone WN-FSA-80 prokMSA_id:192414 EF194098.1 Halorubrum sp. str. DW6 prokMSA_id:202851 EF198415.1 Halorubrum sp. str. DS10 prokMSA_id:542454 NR_028206.1 Halorubrum alkaliphilum str. DZ-1; JCM 12358 1.3.3.1.1.14.3 s__Halorubrum lacusprofundi 7 seqs 1.3.3.1.1.14.3.100 OTU 7 seqs prokMSA_id:627 X82170.1 Halorubrum lacusprofundi str. ACAM 34 prokMSA_id:632 U17365.1 Halorubrum lacusprofundi prokMSA_id:471217 NC_012029.1 Halorubrum lacusprofundi str. ATCC 49239 prokMSA_id:471218 NC_012029.1 Halorubrum lacusprofundi str. ATCC 49239 prokMSA_id:531707 CP001366.1 Halorubrum lacusprofundi str. ATCC 49239 prokMSA_id:532209 CP001365.1 Halorubrum lacusprofundi str. ATCC 49239 prokMSA_id:532210 CP001365.1 Halorubrum lacusprofundi str. ATCC 49239 1.3.3.1.1.14.4 s__Halorubrum lipolyticum 3 seqs 1.3.3.1.1.14.4.101 OTU 3 seqs prokMSA_id:145119 DQ355814.2 Halorubrum sp. str. 9-3 prokMSA_id:550203 AB477978.1 Halorubrum lipolyticum str. JCM 13559 prokMSA_id:565550 NR_028227.1 Halorubrum lipolyticum str. 9-3; JCM 13559 1.3.3.1.1.14.5 s__Halorubrum tibetense 3 seqs 1.3.3.1.1.14.5.102 OTU 3 seqs prokMSA_id:45762 AF435111.1 Halorubrum tibetense str. ZB49 prokMSA_id:57545 AY149598.1 Halorubrum tibetense str. 8W8 prokMSA_id:535008 NR_028198.1 Halorubrum tibetense str. 8W8; JCM 11889 1.3.3.1.1.15 g__Halosimplex 10 seqs 1.3.3.1.1.15.1 s__Halosimplex carlsbadense 10 seqs 1.3.3.1.1.15.1.103 OTU 10 seqs prokMSA_id:20446 AF320478.1 Halosimplex carlsbadense str. 2-9-1; ATCC BAA-75; JCM 11222 prokMSA_id:21614 AF320479.1 Halosimplex carlsbadense str. 2-9-1; ATCC BAA-75; JCM 11222 prokMSA_id:47411 AF320480.1 Halosimplex carlsbadense str. 2-9-1; ATCC BAA-75; JCM 11222 prokMSA_id:83805 AB108676.1 Halosimplex carlsbadense str. 2-9-1 prokMSA_id:84278 AB108677.1 Halosimplex carlsbadense str. 2-9-1 prokMSA_id:85089 AB072814.1 Halosimplex carlsbadense str. 2-9-1 prokMSA_id:85668 AB072815.1 Halosimplex carlsbadense str. 2-9-1 prokMSA_id:86270 AB072816.1 Halosimplex carlsbadense str. 2-9-1 prokMSA_id:106491 AJ586107.1 Halosimplex carlsbadense str. 2-9-1(T) prokMSA_id:106645 AJ586108.1 Halosimplex carlsbadense str. 2-9-1(T) 1.3.3.1.1.16 g__Halostagnicola 12 seqs 1.3.3.1.1.16.1 Unclassified 3 seqs 1.3.3.1.1.16.1.104 OTU 3 seqs prokMSA_id:574034 AB533255.1 extreme halophile order Halobacteriales Halophilic isolate 167-74halophilic str. 167-74 prokMSA_id:578812 AB533254.1 extreme halophile order Halobacteriales Halophilic isolate 167-60halophilic str. 167-60 prokMSA_id:584916 AB533253.1 extreme halophile order Halobacteriales Halophilic isolate 167-55halophilic str. 167-55 1.3.3.1.1.16.2 s__Halostagnicola larsenii 9 seqs 1.3.3.1.1.16.2.105 OTU 9 seqs prokMSA_id:28138 AB049461.3 Natrialba sp. str. Tunisia HMg-25 prokMSA_id:36767 AB049462.1 Natrialba sp. str. Tunisia HMg-27 prokMSA_id:146041 DQ286063.1 Natrialba sp. str. F5 prokMSA_id:149299 DQ309082.1 Natrialba sp. str. F4A prokMSA_id:150406 DQ309083.1 Natrialba sp. str. A137 prokMSA_id:151977 DQ373056.1 Natrialba sp. str. B49 prokMSA_id:152300 AM117571.1 Halostagnum larsenii str. XH-48 prokMSA_id:219825 AB301489.1 Halostagnicola larsenii str. JCM 13463 prokMSA_id:542973 NR_028169.1 Halostagnicola larsenii str. XH-48; JCM 13463 1.3.3.1.1.17 g__Haloterrigena 26 seqs 1.3.3.1.1.17.1 Unclassified 2 seqs 1.3.3.1.1.17.1.106 OTU 2 seqs prokMSA_id:358146 EU308276.1 Haloterrigena sp. str. FIC148_2 prokMSA_id:361791 EU308275.1 Haloterrigena sp. str. FIC148_1 1.3.3.1.1.17.2 s__Haloterrigena thermotolerans 24 seqs 1.3.3.1.1.17.2.107 OTU 24 seqs prokMSA_id:646 AF115478.1 Haloterrigena thermotolerans str. PR 5 prokMSA_id:91085 AY330331.1 Haloterrigena turpansis str. D19 prokMSA_id:104017 AY546107.1 Haloterrigena thermotolerans str. H6 prokMSA_id:106274 AY546002.1 Haloterrigena turpansis str. H4 prokMSA_id:110343 AY820136.3 Haloterrigena saccharominima str. AB12 prokMSA_id:111176 AY820137.2 Haloterrigena saccharominima str. AB14 prokMSA_id:124476 AY994199.1 Haloterrigena thermotolerans str. 10R prokMSA_id:155257 DQ373048.1 Haloterrigena sp. str. D113 prokMSA_id:156730 DQ432022.1 USA: Utah Great Salt Lake isolate GSL1CGSL1C str. GSL1C prokMSA_id:166971 DQ904560.2 Haloterrigena sp. str. AB30 prokMSA_id:199483 EF077633.1 Haloterrigena jeotgali str. A29 prokMSA_id:266427 EU557270.1 Haloterrigena thermotolerans str. Z4 prokMSA_id:341775 EU882033.1 Haloterrigena thermotolerans str. SYS prokMSA_id:541546 FJ686122.1 Haloterrigena sp. str. D83A prokMSA_id:542636 FJ492052.1 Haloterrigena sp. str. DV582c4 prokMSA_id:547629 GQ181208.1 Haloterrigena sp. str. L52 prokMSA_id:548723 FJ686119.1 Haloterrigena sp. str. A206A prokMSA_id:551218 FJ696371.1 Haloterrigena sp. str. MO24 prokMSA_id:551685 GQ225090.1 Haloterrigena sp. str. EzB3 prokMSA_id:554188 NR_028173.1 Haloterrigena thermotolerans str. PR5; DSM 11552 prokMSA_id:556035 FJ492051.1 Haloterrigena sp. str. DV582c2 prokMSA_id:560343 FJ696370.1 Haloterrigena sp. str. MO23 prokMSA_id:570121 FJ696368.1 Haloterrigena sp. str. MO19 prokMSA_id:582639 GU166402.1 Haloterrigena sp. str. EzSm 1.3.3.1.1.18 g__Halovivax 3 seqs 1.3.3.1.1.18.108 OTU 3 seqs prokMSA_id:147625 AM039978.1 Halovivax asiaticus str. EJ-46 prokMSA_id:161282 AM268116.1 Halovivax sp. str. EN-4 prokMSA_id:161562 AM269467.1 Halovivax ruber str. XH-70 1.3.3.1.1.19 g__Natrialba 19 seqs 1.3.3.1.1.19.1 Unclassified 13 seqs 1.3.3.1.1.19.1.109 OTU 13 seqs prokMSA_id:669 AJ001376.1 Natronobacterium wudunaoensis str. Y21 prokMSA_id:671 AJ004806.1 Natrialba chahannaoensis str. C112 prokMSA_id:672 D88256.1 Natrialba sp. str. SSL1 ATCC 43988 prokMSA_id:21979 AB046875.1 Natrialba asiatica str. Aidin-3 prokMSA_id:38317 AF251941.1 Natrialba aegyptia prokMSA_id:43283 X92174.1 soda lake isolate 98NT4 prokMSA_id:58361 AJ003193.1 Natrialba hulunbeirensis str. X21 prokMSA_id:72038 D14123.1 Natrialba asiatica str. 172P1 prokMSA_id:72475 AF262026.1 Natrialba hulunbeirensis str. AS1.1986 prokMSA_id:73832 D14124.1 Natrialba taiwanensis str. B1T prokMSA_id:97250 AY379525.1 Natrialba aibiensis str. D22 prokMSA_id:558908 EU672837.1 Natrialba chahannaoensis str. Sua-CS1 prokMSA_id:577577 NR_029124.1 Natrialba taiwanensis str. B1; DSM 12281 1.3.3.1.1.19.2 s__Natrialba magadii 6 seqs 1.3.3.1.1.19.2.110 OTU 6 seqs prokMSA_id:668 X72495.1 Natrialba magadii str. NCMB 2190 prokMSA_id:51196 AF009601.1 Natronobacterium innermongoliae str. HAM-2 prokMSA_id:521357 CP001933.1 Natrialba magadii str. ATCC 43099 prokMSA_id:528146 CP001932.1 Natrialba magadii str. ATCC 43099 prokMSA_id:528147 CP001932.1 Natrialba magadii str. ATCC 43099 prokMSA_id:551606 NR_028243.1 Natrialba magadii str. ATCC 43099 1.3.3.1.1.2 g__Haladaptatus 11 seqs 1.3.3.1.1.2.1 Unclassified 5 seqs 1.3.3.1.1.2.1.74 OTU 5 seqs prokMSA_id:202923 AB291225.1 Traditional Japanese-style field halobacterial strains that can survive 0.5% salt solution soil isolate 14-2haloarchaeon str. Nie 14-2 prokMSA_id:203470 AB291220.1 Traditional Japanese-style field halobacterial strains that can survive 0.5% salt solution soil isolate 11-1haloarchaeon str. Nie 11-1 prokMSA_id:242334 EF660747.3 Haladaptatus jeotgali str. D43 prokMSA_id:355788 EU887285.2 Haladaptatus sp. str. RO1-28 prokMSA_id:534667 FJ773394.2 Haladaptatus sp. str. RO1-22 1.3.3.1.1.2.2 s__Haladaptatus paucihalophilus 6 seqs 1.3.3.1.1.2.2.75 OTU 6 seqs prokMSA_id:90606 AY292394.1 Haloarchaeon W1 clone 1 prokMSA_id:147807 DQ344974.1 Haloaccomodus multusgeneris str. DX253 prokMSA_id:149425 DQ344973.1 Haloaccomodus multusgeneris str. DX253 prokMSA_id:163294 DQ867123.1 gen. sp. nov. Halophilic -Salt Sulfide-rich Spring Haladaptatus paucihalophilus strain GY252 clone 2 prokMSA_id:170053 DQ867122.1 gen. sp. nov. Halophilic -Salt Sulfide-rich Spring Haladaptatus paucihalophilus strain GY252 clone 1 prokMSA_id:533680 AB477986.1 Haladaptatus paucihalophilus str. JCM 13897 1.3.3.1.1.20 g__Natrinema 28 seqs 1.3.3.1.1.20.1 Unclassified 12 seqs 1.3.3.1.1.20.1.111 OTU 12 seqs prokMSA_id:647 AF027738.1 Natrinema pallidum str. NCMB 784 prokMSA_id:72482 D14125.1 Halorubrum trapanicum str. NCMB767 prokMSA_id:74122 D14126.1 halophilic str. L-11 prokMSA_id:87483 AY277584.1 Natrinema altuensis str. AJ6 prokMSA_id:90753 AY298734.1 Natrinema aidingensis str. D20 prokMSA_id:104969 AY570917.1 Natrinema ajinwuensis str. AJ12 prokMSA_id:152442 DQ373047.1 Natrinema sp. str. B77A prokMSA_id:243199 DQ874620.1 Natrinema sp. str. J7 prokMSA_id:358776 EU308274.1 Halorubrum sp. str. FIC234 prokMSA_id:370246 EU308273.1 Halorubrum sp. str. FIC145 prokMSA_id:536440 AB477230.1 Natrinema pallidum str. JCM 8980 prokMSA_id:592089 AF367370.2 Natrinema pallidum str. R-fish 1.3.3.1.1.20.2 s__Natrinema altunense 5 seqs 1.3.3.1.1.20.2.112 OTU 5 seqs prokMSA_id:81102 AY208972.1 Natrinema ajinwuensis str. AJ2 prokMSA_id:86958 AY277583.1 Natrinema aibiensis str. AB3 prokMSA_id:104829 AY570916.1 Natrinema ajinwuensis str. AJ11 prokMSA_id:105119 AY570918.1 Natrinema ajinwuensis str. AJ13 prokMSA_id:111727 AY899297.1 Halobacterium sp. AS7092 1.3.3.1.1.20.3 s__Natrinema gari 7 seqs 1.3.3.1.1.20.3.113 OTU 7 seqs prokMSA_id:83240 AY232296.1 Natrinema sp. str. HM06 prokMSA_id:177627 AB289741.1 Natrinema sp. str. HIS40-3 prokMSA_id:188504 AB289742.2 Natrinema sp. str. HDS1-1 prokMSA_id:197313 AB289743.1 Natrinema sp. str. HDS3-1 prokMSA_id:256123 AM285296.1 Natrinema sp. str. FP1R prokMSA_id:361054 EU308277.1 Haloterrigena sp. str. FIC147 prokMSA_id:545758 NR_028167.1 Natrinema gari str. HIS40-3 JCM 14663 1.3.3.1.1.20.4 s__Natrinema sp. XA3-1 4 seqs 1.3.3.1.1.20.4.114 OTU 4 seqs prokMSA_id:101563 AJ586110.1 Natrinema sp. str. XA3-1 prokMSA_id:101740 AJ586111.1 Natrinema sp. str. XA3-1 prokMSA_id:101899 AJ586112.1 Natrinema sp. str. XA3-1 prokMSA_id:127787 AY588481.1 Natrinema sp. str. CX2021 1.3.3.1.1.21 g__Natronococcus 19 seqs 1.3.3.1.1.21.115 OTU 19 seqs prokMSA_id:674 Z28378.1 Natronococcus occultus str. NCMB 2192 prokMSA_id:675 D43628.1 Natronococcus amylolyticus str. Ah-36 (FERM P-11024) prokMSA_id:32045 X92173.1 soda lake isolate 93lLM4 prokMSA_id:32934 X92172.1 soda lake isolate 89M4 prokMSA_id:42055 X92175.1 soda lake isolate 86M4 prokMSA_id:52324 AF251285.1 Natronococcus xinjiangense prokMSA_id:100467 AB113624.1 subsurface geothermal water clone HAuD-MA11 prokMSA_id:100936 AB113627.1 subsurface geothermal water clone HAuD-MA45 prokMSA_id:105075 AY433789.1 Natronococcus zabuyensis str. DS7 prokMSA_id:116055 DQ008591.1 Natronococcus sp. str. TC6 prokMSA_id:132612 DQ076670.1 Natronococcus sp. str. XH4 prokMSA_id:173903 DQ917777.1 Natronococcus yunnanense str. YIM-ARC 0034 prokMSA_id:190354 EF077631.1 Natronococcus jeotgali str. B1 prokMSA_id:246210 EF690629.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_74 prokMSA_id:248035 EF690559.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_04 prokMSA_id:251898 EF690593.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_38 prokMSA_id:252133 EF690628.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_73 prokMSA_id:256680 EF690609.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_54 prokMSA_id:343553 EU780915.1 Natronococcus sp. str. GS3 1.3.3.1.1.22 g__Natronorubrum 29 seqs 1.3.3.1.1.22.1 Unclassified 20 seqs 1.3.3.1.1.22.1.116 OTU 20 seqs prokMSA_id:645 AB009624.1 Halobacterium sp. subsp. Miscellaneous str. arg-4 prokMSA_id:657 Y14028.1 Natronorubrum bangense str. A33 prokMSA_id:660 AB005656.1 Natronorubrum tibetense str. GA33 prokMSA_id:28549 AB046927.1 Natronorubrum sp. str. Tenzan-10 prokMSA_id:47016 AB046926.1 Natronorubrum sp. str. Wadi Natrun-19 prokMSA_id:106803 AJ586109.1 Natrinema sp. str. XA3-1 prokMSA_id:109519 AY862140.1 Natronorubrum thiooxidans str. HG1 prokMSA_id:115326 AY989910.1 Natrinema xinjiang str. ABDH40 prokMSA_id:146856 DQ309080.1 Haloterrigena sp. str. A82 prokMSA_id:151335 AM231733.1 Natrinema ejinense str. EJ-57 prokMSA_id:151936 DQ367242.2 Haloterrigena sp. ABH32 prokMSA_id:154200 DQ373051.1 Natrinema sp. str. E92B prokMSA_id:155724 DQ373049.1 Haloterrigena sp. str. E57B prokMSA_id:236030 EF690610.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_55 prokMSA_id:244205 EF690587.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_32 prokMSA_id:246508 EF690600.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_45 prokMSA_id:254568 EF690599.1 Archaeal Alkaline-Saline Soil Former lake Texcoco (Mexico) alkaline-saline soil clone TX4CA_44 prokMSA_id:559983 FJ545273.1 Haloterrigena daqingensis str. JX313 prokMSA_id:560969 NR_028147.1 Natronorubrum tibetense str. GA33; JCM 10636 prokMSA_id:568441 AB477229.1 Natrinema ejinorense str. JCM 13890 1.3.3.1.1.22.2 s__Natronorubrum aibiense 6 seqs 1.3.3.1.1.22.2.117 OTU 6 seqs prokMSA_id:140058 DQ205516.3 Natronorubrum aibiense str. 7-3 prokMSA_id:141611 DQ272589.1 Natronorubrum aibiense str. ABH7 prokMSA_id:142196 DQ272588.1 Natronorubrum aibiense str. 7-2 prokMSA_id:142215 DQ272590.1 Natronorubrum aibiense str. D7 prokMSA_id:142750 DQ272587.1 Natronorubrum aibiense str. 7-1 prokMSA_id:544733 NR_029141.1 Natronorubrum aibiense str. 7-3; JCM 13488 1.3.3.1.1.22.3 s__Natronorubrum sulfidifaciens 3 seqs 1.3.3.1.1.22.3.118 OTU 3 seqs prokMSA_id:161532 DQ535889.2 Natronorubrum sp. str. AD2 prokMSA_id:575508 AB477234.1 Natronorubrum sulfidifaciens str. JCM 14089 prokMSA_id:581247 NR_029142.1 Natronorubrum sulfidifaciens str. AD2; JCM 14089 1.3.3.1.1.3 g__Halalkalicoccus 5 seqs 1.3.3.1.1.3.1 Unclassified 2 seqs 1.3.3.1.1.3.1.76 OTU 2 seqs prokMSA_id:27020 AF435112.1 Halococcus tibetense str. ZB28 prokMSA_id:156166 DQ373058.1 Halalkalicoccus sp. str. C15 1.3.3.1.1.3.2 s__Halalkalicoccus jeotgali 3 seqs 1.3.3.1.1.3.2.77 OTU 3 seqs prokMSA_id:198913 EF077632.1 Halalkalicoccus jeotgali str. B3 prokMSA_id:540504 AB486003.1 Halalkalicoccus jeotgali str. JCM 14584 prokMSA_id:541767 AB477223.1 Halalkalicoccus jeotgali str. JCM 14584 1.3.3.1.1.4 g__Haloarcula 131 seqs 1.3.3.1.1.4.78 OTU 131 seqs prokMSA_id:693 X61688.1 Haloarcula marismortui prokMSA_id:694 AF034619.1 Haloarcula marismortui prokMSA_id:695 AB010965.1 Haloarcula sp str. 801030/1 prokMSA_id:698 D14130.1 Haloarcula sinaiiensis str. ATCC33800 prokMSA_id:699 D14129.1 Haloarcula sinaiiensis str. ATCC33800 prokMSA_id:700 X61689.1 Haloarcula marismortui prokMSA_id:701 AF034620.1 Haloarcula marismortui prokMSA_id:702 AB000563.1 Haloarcula aidinensis str. B-2 prokMSA_id:703 D50849.1 Haloarcula argentinensis prokMSA_id:704 AB010964.1 Haloarcula sp str. 801030/1 prokMSA_id:708 U17593.1 Haloarcula vallismortis prokMSA_id:709 D50851.1 Haloarcula vallismortis prokMSA_id:18654 AB074563.1 Halobacterium sp. str. NCIMB 720 prokMSA_id:23836 AB074562.1 Halobacterium sp. str. NCIMB 714 prokMSA_id:27305 AB074561.1 Halobacterium sp. str. NCIMB 714 prokMSA_id:39389 AB074564.1 Halobacterium sp. str. NCIMB 720 prokMSA_id:61001 AB090168.1 Haloarcula hispanica str. ATCC 33960 prokMSA_id:61002 AB090167.1 Haloarcula hispanica str. ATCC 33960 prokMSA_id:87898 AY277585.1 Haloarcula altuensis str. AJ7 prokMSA_id:103228 AB098337.1 Haloarcula sp. str. OHF-2 prokMSA_id:103387 AY208973.1 Haloarcula ajinwuensis str. AJ4 prokMSA_id:105902 AB098536.1 Haloarcula sp. str. OHF-1 prokMSA_id:108256 AY596298.1 Haloarcula marismortui str. ATCC 43049 prokMSA_id:108337 NC_006396.1 Haloarcula marismortui str. ATCC 43049 prokMSA_id:108390 AY596297.1 Haloarcula marismortui str. ATCC 43049 prokMSA_id:108695 NC_006397.1 Haloarcula marismortui str. ATCC 43049 prokMSA_id:118820 AY994193.1 Haloarcula marismortui str. R5 prokMSA_id:123300 AY994194.1 Haloarcula marismortui str. 1R prokMSA_id:126487 AY994195.1 Haloarcula sp. str. M4r1 prokMSA_id:128515 NC_006396.1 Haloarcula marismortui str. ATCC 43049 prokMSA_id:128770 AY596297.1 Haloarcula marismortui str. ATCC 43049 prokMSA_id:129789 DQ089686.1 Haloarcula hispanica str. HLR6 prokMSA_id:129859 DQ089683.1 Haloarcula hispanica str. HLR4 prokMSA_id:131331 AY987820.1 Halobacterium sp. 2Ma3 prokMSA_id:132088 DQ120725.1 Haloarcula algeriensis str. S1 prokMSA_id:132646 AY987819.1 Haloarcula sp. 5Mm10 prokMSA_id:133397 DQ089682.1 Haloarcula hispanica str. HLR2 prokMSA_id:133407 AY987818.1 Haloarcula sp. 2Sb1 prokMSA_id:134456 DQ089681.1 Haloarcula hispanica str. HLR1 prokMSA_id:136222 DQ089685.1 Taiwan: Miouli Salt Mountain prokMSA_id:137889 DQ129873.2 Haloarcula sp. LCKW-Isolate15A prokMSA_id:147123 DQ309094.1 Haloarcula sp. str. A43 prokMSA_id:147175 DQ309093.1 Haloarcula sp. str. A283 prokMSA_id:149047 DQ334803.1 Haloarcula sp. AS7094 prokMSA_id:150208 DQ309092.1 Haloarcula sp. str. A337 prokMSA_id:154212 DQ373062.1 Haloarcula sp. str. B44A prokMSA_id:158224 DQ471854.1 Haloarcula sp. AB19 prokMSA_id:160510 DQ129875.2 Haloarcula sp. LCKW-Isolate20A prokMSA_id:164594 DQ826513.2 Haloarcula amylolytica str. BD-3 prokMSA_id:172626 DQ854818.2 Haloarcula amylolytica str. BD-3 prokMSA_id:173718 DQ826512.3 Haloarcula amylolytica str. BD-3 prokMSA_id:188765 EF153424.1 Investigation microbial DGGE method saltern soil clone ntu13 prokMSA_id:235286 AB355986.1 Haloarcula japonica str. JCM 7785 prokMSA_id:236921 EF645685.1 Haloarcula japonica str. JCM7785 prokMSA_id:237039 EF645693.1 Haloarcula marismortui str. CGMCC1.1784 prokMSA_id:237852 EF645688.1 Haloarcula vallismortis str. CGMCC1.2048 prokMSA_id:238648 AB355989.1 Haloarcula sinaiiensis str. JCM 8862 prokMSA_id:240020 EF645684.1 Haloarcula japonica str. JCM7785 prokMSA_id:241875 EF645681.1 Haloarcula argentinensis str. JCM9737 prokMSA_id:242011 AB355988.1 Haloarcula quadrata str. JCM 11048 prokMSA_id:244868 EF645689.1 Haloarcula quadrata str. JCM11048 prokMSA_id:245407 AB355987.1 Haloarcula marismortui str. JCM 8966 prokMSA_id:245626 AB355982.1 Haloarcula vallismortis str. JCM 8877 prokMSA_id:246896 EF645687.1 Haloarcula vallismortis str. CGMCC1.2048 prokMSA_id:248065 EF645680.1 Haloarcula argentinensis str. JCM9737 prokMSA_id:248097 AB355983.1 Haloarcula argentinensis str. JCM 9737 prokMSA_id:249495 EF645692.1 Haloarcula marismortui str. CGMCC1.1784 prokMSA_id:249754 AB355984.1 Haloarcula sp. str. aus-5 prokMSA_id:250353 EF645686.1 Haloarcula japonica str. JCM7785 prokMSA_id:250432 EF645682.1 Haloarcula hispanica str. CGMCC1.2049 prokMSA_id:251952 EF645683.1 Haloarcula hispanica str. CGMCC1.2049 prokMSA_id:252450 AB355985.1 Haloarcula hispanica str. JCM 8911 prokMSA_id:257511 EF645694.1 Haloarcula quadrata str. JCM11048 prokMSA_id:311512 EU722673.1 Microbial athalassohaline Tirez lagoon (Spain) sediment clone SA21 prokMSA_id:313962 EU708436.1 Haloarcula sp. str. 113 prokMSA_id:340182 EU722672.1 Microbial athalassohaline Tirez lagoon (Spain) sediment clone SA52 prokMSA_id:357138 EU308171.1 Haloarcula sp. str. FC168_11 prokMSA_id:357439 EU308200.1 Haloarcula sp. str. FC168_40 prokMSA_id:357517 EU308184.1 Haloarcula sp. str. FC168_24 prokMSA_id:358209 EU308161.1 Haloarcula sp. str. FC168_1 prokMSA_id:358294 FJ429313.1 Haloarcula sp. str. HST03 prokMSA_id:358355 EU308165.1 Haloarcula sp. str. FC168_5 prokMSA_id:358804 EU308182.1 Haloarcula sp. str. FC168_22 prokMSA_id:358950 EU308178.1 Haloarcula sp. str. FC168_18 prokMSA_id:359187 EU308188.1 Haloarcula sp. str. FC168_28 prokMSA_id:359558 EU308175.1 Haloarcula sp. str. FC168_15 prokMSA_id:359923 EU308193.1 Haloarcula sp. str. FC168_33 prokMSA_id:360200 EU308180.1 Haloarcula sp. str. FC168_20 prokMSA_id:360283 EU308195.1 Haloarcula sp. str. FC168_35 prokMSA_id:360475 EU308174.1 Haloarcula sp. str. FC168_14 prokMSA_id:361334 EU308199.1 Haloarcula sp. str. FC168_39 prokMSA_id:362061 EU308168.1 Haloarcula sp. str. FC168_8 prokMSA_id:362191 FJ429314.1 Haloarcula sp. str. HST03 prokMSA_id:362196 EU308169.1 Haloarcula sp. str. FC168_9 prokMSA_id:362649 EU308173.1 Haloarcula sp. str. FC168_13 prokMSA_id:362650 FJ429316.1 Haloarcula sp. str. HST03 prokMSA_id:362657 EU308176.1 Haloarcula sp. str. FC168_16 prokMSA_id:363011 EU308192.1 Haloarcula sp. str. FC168_32 prokMSA_id:363025 EU308177.1 Haloarcula sp. str. FC168_17 prokMSA_id:363245 EU308185.1 Haloarcula sp. str. FC168_25 prokMSA_id:363256 EU308189.1 Haloarcula sp. str. FC168_29 prokMSA_id:363555 EU308179.1 Haloarcula sp. str. FC168_19 prokMSA_id:363627 EU308196.1 Haloarcula sp. str. FC168_36 prokMSA_id:363645 EU308163.1 Haloarcula sp. str. FC168_3 prokMSA_id:364485 EU308183.1 Haloarcula sp. str. FC168_23 prokMSA_id:364915 EU308198.1 Haloarcula sp. str. FC168_38 prokMSA_id:365028 EU308190.1 Haloarcula sp. FC130_30 str. FC168_30 prokMSA_id:365818 FJ429318.1 Haloarcula sp. str. HST01-2R prokMSA_id:366331 EU308162.1 Haloarcula sp. FC167_2 str. FC168_2 prokMSA_id:366555 FJ429317.1 Haloarcula sp. str. HST01-2R prokMSA_id:366660 EU308164.1 Haloarcula sp. str. FC168_4 prokMSA_id:366711 EU308167.1 Haloarcula sp. str. FC168_7 prokMSA_id:367398 EU308187.1 Haloarcula sp. str. FC168_27 prokMSA_id:367759 EU308194.1 Haloarcula sp. str. FC168_34 prokMSA_id:368123 EU308166.1 Haloarcula sp. str. FC168_6 prokMSA_id:368128 EU308191.1 Haloarcula sp. str. FC168_31 prokMSA_id:368149 EU308172.1 Haloarcula sp. str. FC168_12 prokMSA_id:368388 EU308186.1 Haloarcula sp. str. FC168_26 prokMSA_id:368984 EU308181.1 Haloarcula sp. str. FC168_21 prokMSA_id:369162 EU308170.1 Haloarcula sp. str. FC168_10 prokMSA_id:369226 EU308197.1 Haloarcula sp. str. FC168_37 prokMSA_id:369869 EU308201.1 Haloarcula sp. str. FC168_41 prokMSA_id:512138 GQ225084.1 Haloarcula sp. str. Ez1.2 prokMSA_id:517772 GU361138.1 Haloarcula sp. str. MGG3 prokMSA_id:518606 GU361137.1 Haloarcula sp. str. MGG2 prokMSA_id:535418 NR_028234.1 Haloarcula japonica str. TR-1; JCM 7785 prokMSA_id:554152 AB477984.1 Haloarcula californiae str. JCM 8912 prokMSA_id:563669 FN391277.2 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1G041 prokMSA_id:576105 FJ686128.1 Haloarcula sp. str. CH7 prokMSA_id:583691 FJ868731.1 Isolation Haloarcula and Haloferax alkane-degrading strains uncontaminated ponds (Camargue France) hypersaline pond water sediment interface saltern site isolate 2haloarchaeon str. MSNC 2 prokMSA_id:590052 FJ868736.1 Isolation Haloarcula and Haloferax alkane-degrading strains uncontaminated hypersaline ponds (Camargue France) salt marsh isolate EH4haloarchaeon str. EH4 1.3.3.1.1.5 g__Halobacterium 70 seqs 1.3.3.1.1.5.1 Unclassified 27 seqs 1.3.3.1.1.5.1.79 OTU 27 seqs prokMSA_id:16446 AJ270237.1 haloarchaeon str. WM2C.13 prokMSA_id:33134 AJ270236.1 haloarchaeon str. PW5.4 prokMSA_id:38000 AJ270239.1 haloarchaeon str. BbpA.1 prokMSA_id:41317 AJ270235.1 haloarchaeon str. 004.1 prokMSA_id:44211 AJ270238.1 haloarchaeon str. B1bra.5 prokMSA_id:81508 AJ548827.1 Halobacterium noricense str. A1 prokMSA_id:114521 AJ878083.1 Halobacterium sp. 2-24-7 prokMSA_id:114532 AJ878082.1 Halobacterium sp. 2-24-6 prokMSA_id:114553 AJ878081.1 Halobacterium sp. 2-24-5 prokMSA_id:114604 AJ878080.1 Halobacterium sp. 2-24-4 prokMSA_id:114610 AJ878079.1 Halobacterium sp. 2-24-3 prokMSA_id:114717 AJ878078.1 Halobacterium sp. 2-24-2 prokMSA_id:130919 AY987823.1 Microbial Salterns Maras salterns clone 2A8 prokMSA_id:132811 AY987822.1 Microbial Salterns Maras salterns clone 2A6 prokMSA_id:133547 AY987827.1 Microbial Salterns Maras salterns clone 7A16 prokMSA_id:133630 AY987826.1 Microbial Salterns Maras salterns clone 7A23 prokMSA_id:136410 AY987825.1 Microbial Salterns Maras salterns clone 5A9 prokMSA_id:136425 AY987828.1 Halobacterium sp. 5Mm6 prokMSA_id:136434 AY987824.1 Microbial Salterns Maras salterns clone 5A2 prokMSA_id:136450 AY987821.1 Microbial Salterns Maras salterns clone 2A1 prokMSA_id:144274 DQ256409.2 Halobacterium jilantaiense str. NG4 prokMSA_id:248241 AM902590.1 Halobacterium sp. str. BIHSTY150/18 prokMSA_id:257914 AM902591.1 Halobacterium sp. str. BIHGY150/14 prokMSA_id:314767 EU722668.1 Microbial athalassohaline Tirez lagoon (Spain) sediment clone SA77 prokMSA_id:318168 EU722667.1 Microbial athalassohaline Tirez lagoon (Spain) sediment clone SA7 prokMSA_id:510163 FJ686125.1 Halobacterium sp. str. CH11 prokMSA_id:555646 AB477970.1 Halobacterium jilantaiense str. JCM 13558 1.3.3.1.1.5.2 s__Halobacterium salinarum 43 seqs 1.3.3.1.1.5.2.80 OTU 43 seqs prokMSA_id:633 X03407.1 Halobacterium halobium prokMSA_id:634 M11583.1 Halobacterium halobium prokMSA_id:635 AF110768.1 Halobacterium sp. str. 9R prokMSA_id:636 U68538.1 Halobacterium salinarum str. E12 prokMSA_id:637 M38280.1 Halobacterium halobium prokMSA_id:641 K02971.1 Halobacterium cutirubrum prokMSA_id:23901 AB074565.1 Halobacterium sp. str. NCIMB 741 prokMSA_id:32933 AE005128.1 Halobacterium sp. NRC-1 str. NRC-1; ATCC 700922 prokMSA_id:40871 AB074301.1 Halobacterium sp. str. NCIMB 733 prokMSA_id:47635 AF355101.1 Halobacterium sp. str. JP-6 prokMSA_id:50435 AB074299.1 Halobacterium salinarum str. NCIMB 2288 prokMSA_id:54099 NC_002607.1 Halobacterium sp. str. NRC-1 prokMSA_id:63193 AJ496185.1 Halobacterium salinarum str. DSM 3754 prokMSA_id:68649 AB081731.1 Halobacterium sp. str. JCM 9447 prokMSA_id:70968 D14127.1 Halobacterium sp. str. Y12 prokMSA_id:82712 AY232300.1 Halobacterium sp. str. HM13 prokMSA_id:83852 AY232297.1 Halobacterium sp. str. HM01 prokMSA_id:83927 AY232298.1 Halobacterium sp. str. HM02 prokMSA_id:86046 AY232299.1 Halobacterium sp. str. HM11 prokMSA_id:124904 AY994198.1 Halobacterium salinarum str. Cer6a prokMSA_id:144023 AM176543.1 Halobacterium sp. str. HSC3 prokMSA_id:154500 K02971.1 Halobacterium salinarum prokMSA_id:161114 AB219965.1 Halobacterium salinarum prokMSA_id:175010 AB285007.1 Halobacterium sp. str. AS28 prokMSA_id:180325 AB285008.1 Halobacterium sp. str. AS133 prokMSA_id:184842 AB284264.1 Halobacterium salinarum str. HSD2-5 prokMSA_id:186612 AB285009.1 Halobacterium sp. str. HM3 prokMSA_id:191499 AB285020.1 Halobacterium sp. str. HPC1-2 prokMSA_id:206738 EF201784.1 Halobacterium sp. LCKS000-Isolate39 prokMSA_id:216702 EF201785.1 Halobacterium sp. LCKS200-Isolate33 prokMSA_id:225030 AE004437.1 Halobacterium sp. NRC-1 str. NRC-1; ATCC 700922 prokMSA_id:261960 AM774415.1 Halobacterium salinarum str. DSM 671 = R1 prokMSA_id:267312 NC_010364.1 Halobacterium salinarum R1 str. R1; DSM 671 prokMSA_id:358102 EU308202.1 Halobacterium sp. str. FIC146_1 prokMSA_id:360578 EU308205.1 Halobacterium sp. str. FIC146_4 prokMSA_id:361620 EU308204.1 Halobacterium sp. str. FIC146_3 prokMSA_id:362573 EU308203.1 Halobacterium sp. str. FIC146_2 prokMSA_id:365221 EU308206.1 Halobacterium sp. str. FIC145_1 prokMSA_id:366498 EU308207.1 Halobacterium sp. str. FIC145_2 prokMSA_id:509044 FJ609943.1 Halobacterium sp. str. P102070208-3O prokMSA_id:509730 FJ609944.1 Halobacterium sp. str. P102070208-3R prokMSA_id:536755 GQ853882.1 Halobacterium sp. str. halo-3 prokMSA_id:565422 FJ609946.1 Halobacterium sp. str. P92A090908-6P 1.3.3.1.1.6 g__Halobiforma 6 seqs 1.3.3.1.1.6.81 OTU 6 seqs prokMSA_id:43132 AF333760.2 Halobiforma haloterrestris str. 135 prokMSA_id:74440 AB045012.1 Halobiforma nitratireducens str. C231 prokMSA_id:87196 AY277581.1 Natronococcus aibiensis str. AB1 prokMSA_id:112074 AY864780.1 Natronococcus aibiensis M11 prokMSA_id:115205 AY277582.3 Halobiforma salilacus str. AJ5 prokMSA_id:201368 EF153427.1 Investigation microbial DGGE method saltern soil clone ntu6 1.3.3.1.1.7 g__Halococcus 34 seqs 1.3.3.1.1.7.1 Unclassified 14 seqs 1.3.3.1.1.7.1.82 OTU 14 seqs prokMSA_id:685 AB004876.1 Halococcus saccharolyticus str. ATCC49257 prokMSA_id:688 D63786.1 Halococcus sp. JCM 8979 str. JCM8979 prokMSA_id:17584 AB074302.1 Halobacterium sp. str. NCIMB 734 prokMSA_id:27023 AB074304.1 Halobacterium sp. str. NCIMB 765 prokMSA_id:38435 AB074303.1 Halobacterium sp. str. NCIMB 765 prokMSA_id:39472 AJ420376.1 Halococcus dombrowskii str. H4 prokMSA_id:83880 AY243109.1 Halococcus qingdaogense str. CM5 prokMSA_id:131259 AB220646.1 Halococcus sp. str. IS10-2 prokMSA_id:131763 AB220647.1 Halococcus sp. str. DB5-2 prokMSA_id:197023 AB284265.1 Halococcus saccharolyticus str. HRF6 prokMSA_id:249423 AM902587.1 Halococcus sp. str. BIGigoW09 prokMSA_id:546215 NR_028186.1 Halococcus dombrowskii str. H4; DSM 14522 prokMSA_id:547142 NR_028200.1 Halococcus qingdaonensis str. CM5; JCM 13587 prokMSA_id:562820 AB477971.1 Halococcus qingdaonensis str. JCM 13587 1.3.3.1.1.7.2 s__Halococcus hamelinensis 10 seqs 1.3.3.1.1.7.2.83 OTU 10 seqs prokMSA_id:17995 AB074300.1 Halobacterium sp. str. NCIMB 718 prokMSA_id:158825 DQ017835.1 Halococcus hamelinii str. 100A6 prokMSA_id:200253 AB291221.1 Traditional Japanese-style field halobacterial strains that can survive 0.5% salt solution soil isolate 11-2haloarchaeon str. Nie 11-2 prokMSA_id:200866 AB291224.1 Traditional Japanese-style field halobacterial strains that can survive 0.5% salt solution soil isolate 14-1haloarchaeon str. Nie 14-1 prokMSA_id:201086 AB291219.1 Traditional Japanese-style field halobacterial strains that can survive 0.5% salt solution soil isolate 10-2haloarchaeon str. Nie 10-2 prokMSA_id:201424 AB291223.1 Traditional Japanese-style field halobacterial strains that can survive 0.5% salt solution soil isolate 13haloarchaeon str. Nie 13 prokMSA_id:201711 AB291218.1 Traditional Japanese-style field halobacterial strains that can survive 0.5% salt solution soil isolate 10-1haloarchaeon str. Nie 10-1 prokMSA_id:220090 AB301068.1 Halococcus hamelinensis str. JCM 12892 prokMSA_id:360281 EU308208.1 Halococcus sp. str. FC211 prokMSA_id:574835 NR_028168.1 Halococcus hamelinensis str. 100A6; JCM 12892 1.3.3.1.1.7.3 s__Halococcus morrhuae 4 seqs 1.3.3.1.1.7.3.84 OTU 4 seqs prokMSA_id:686 D11106.2 Halococcus morrhuae str. NRC 16008 prokMSA_id:687 X72588.1 Halococcus morrhuae prokMSA_id:689 X00662.1 Halococcus morrhuae prokMSA_id:237713 AM902589.1 Halococcus sp. str. 001/2 1.3.3.1.1.7.4 s__Halococcus salifodinae 6 seqs 1.3.3.1.1.7.4.85 OTU 6 seqs prokMSA_id:676 Z28387.1 Halococcus salifodinae str. Blp rock-salt Austrian salt mine prokMSA_id:678 AB004877.1 Halococcus salifodinae str. DSM8989 prokMSA_id:679 AJ238897.1 Halococcus salifodinae str. Br3 prokMSA_id:684 AJ131458.1 Halococcus salifodinae str. BG 2/2 prokMSA_id:249413 AM902586.1 Halococcus sp. str. BIHTY10/11 prokMSA_id:250721 AM902588.1 Halococcus sp. str. 004/1-2 1.3.3.1.1.8 g__Haloferax 124 seqs 1.3.3.1.1.8.1 Unclassified 82 seqs 1.3.3.1.1.8.1.86 OTU 82 seqs prokMSA_id:600 D11107.1 Haloferax mediterranei str. ATCC 33500 prokMSA_id:604 K00421.1 Haloferax volcanii prokMSA_id:607 U68540.1 Haloferax volcanii str. E8 prokMSA_id:608 AF069950.1 Haloferax sp. str. D1227 prokMSA_id:25672 AB074566.1 Haloferax volcanii str. NCIMB 2287 prokMSA_id:71072 D14128.1 Haloferax denitrificans str. ATCC35960 prokMSA_id:95310 AY425724.1 Haloferax volcanii str. NCIMB 2012 prokMSA_id:101058 AB081732.1 Haloferax lucentense str. JCM 9276 prokMSA_id:104127 AY458601.1 Haloferax sulfurifontis str. M6 prokMSA_id:118305 AY994200.1 Haloferax sp. str. N5 prokMSA_id:139004 DQ149846.1 Haloferax berberensis str. 4 prokMSA_id:142464 AM176545.1 Haloferax sp. str. LSC3 prokMSA_id:145410 DQ309085.1 Haloferax sp. str. A317 prokMSA_id:146904 DQ309084.1 Haloferax sp. str. A440 prokMSA_id:153873 DQ373057.1 Haloferax sp. str. D107 prokMSA_id:156831 DQ458847.1 Haloferax sp. str. ZJ203 prokMSA_id:156835 DQ458844.1 Haloferax sp. str. YT236 prokMSA_id:156948 DQ458846.1 Haloferax sp. str. YT247 prokMSA_id:178424 EF153423.1 Investigation microbial DGGE method saltern soil clone ntu12 prokMSA_id:204310 AB258306.1 Haloferax rutilus str. BR2 prokMSA_id:205416 AB258308.1 Haloferax antrum str. GR2 prokMSA_id:208946 AB258307.1 Haloferax opilio str. BB8 prokMSA_id:213109 AB258304.1 Haloferax viridis str. BV2 prokMSA_id:307678 DQ860980.1 Haloferax mucosum str. PA12 prokMSA_id:340559 DQ860977.1 Haloferax elongans str. SA5 prokMSA_id:357600 EU308234.1 Haloferax sp. str. 25H4_3 prokMSA_id:357832 EU308264.1 Haloferax sp. str. FIB210_2 prokMSA_id:357879 EU308269.1 Haloferax sp. str. FIB210_7 prokMSA_id:357915 EU308250.1 Haloferax sp. str. FC28_9 prokMSA_id:358796 EU308270.1 Haloferax sp. str. FIB210_8 prokMSA_id:358960 EU308263.1 Haloferax sp. str. FIB210_1 prokMSA_id:359686 EU308242.1 Haloferax sp. str. FC28_1 prokMSA_id:359704 EU308254.1 Haloferax sp. str. FC28_13 prokMSA_id:359817 EU308245.1 Haloferax sp. str. FC28_4 prokMSA_id:359926 EU308237.1 Haloferax sp. str. 50C21_2 prokMSA_id:360293 EU308248.1 Haloferax sp. str. FC28_7 prokMSA_id:360509 EU308257.1 Haloferax sp. str. FC28_16 prokMSA_id:360775 EU308252.1 Haloferax sp. str. FC28_11 prokMSA_id:361123 EU308260.1 Haloferax sp. str. FC28_19 prokMSA_id:361479 EU308251.1 Haloferax sp. str. FC28_10 prokMSA_id:361857 EU308244.1 Haloferax sp. str. FC28_3 prokMSA_id:362032 EU308266.1 Haloferax sp. str. FIB210_4 prokMSA_id:362204 EU308268.1 Haloferax sp. str. FIB210_6 prokMSA_id:362249 EU308253.1 Haloferax sp. str. FC28_12 prokMSA_id:362953 EU308239.1 Haloferax sp. str. 50C21_4 prokMSA_id:363355 EU308238.1 Haloferax sp. str. 50C21_3 prokMSA_id:363841 EU308271.1 Haloferax sp. str. FIB210_9 prokMSA_id:363900 EU308241.1 Haloferax sp. str. 50C21_6 prokMSA_id:364267 EU308233.1 Haloferax sp. str. 25H4_2 prokMSA_id:364632 EU308262.1 Haloferax sp. str. FC28_21 prokMSA_id:365295 EU308240.1 Haloferax sp. str. 50C21_5 prokMSA_id:365330 EU308255.1 Haloferax sp. str. FC28_14 prokMSA_id:365715 EU308265.1 Haloferax sp. str. FIB210_3 prokMSA_id:366281 EU308267.1 Haloferax sp. str. FIB210_5 prokMSA_id:366537 EU308258.1 Haloferax sp. str. FC28_17 prokMSA_id:366809 EU308235.1 Haloferax sp. str. 25H4_4 prokMSA_id:366958 EU308259.1 Haloferax sp. str. FC28_18 prokMSA_id:367686 EU308261.1 Haloferax sp. str. FC28_20 prokMSA_id:367848 EU308256.1 Haloferax sp. str. FC28_15 prokMSA_id:368005 EU308243.1 Haloferax sp. str. FC28_2 prokMSA_id:368034 EU308249.1 Haloferax sp. str. FC28_8 prokMSA_id:369384 EU308236.1 Haloferax sp. str. 50C21_1 prokMSA_id:369817 EU308247.1 Haloferax sp. str. FC28_6 prokMSA_id:369837 EU308246.1 Haloferax sp. str. FC28_5 prokMSA_id:370094 EU308232.1 Haloferax sp. str. 25H4_1 prokMSA_id:510949 FJ868734.1 Isolation Haloarcula and Haloferax alkane-degrading strains uncontaminated ponds (Camargue France) hypersaline pond water sediment interface saltern site isolate 14(3)haloarchaeon str. MSNC 14(3) prokMSA_id:515384 GU361130.1 Haloferax sp. str. Set21 prokMSA_id:530303 GU361125.1 Haloferax sp. str. Bej51 prokMSA_id:538109 FJ696380.1 Haloferax sp. str. GSP103 prokMSA_id:543764 GQ478061.1 Haloferax sp. str. CS1-3 prokMSA_id:544489 GQ478074.1 Haloferax sp. str. CS1-8 prokMSA_id:551699 GQ478062.1 Haloferax sp. str. CS1-7 prokMSA_id:555404 FJ348410.1 Investigation microbial soil method saltern 15 cm be surface clone DGGE gel band ntu335 prokMSA_id:562377 FJ696382.1 Haloferax sp. str. GSP105 prokMSA_id:566993 FJ696384.1 Haloferax sp. str. GSP107 prokMSA_id:569747 FJ696381.1 Haloferax sp. str. GSP104 prokMSA_id:570247 FJ696374.1 Haloferax sp. str. MO52 prokMSA_id:575042 NR_028212.1 Haloferax mediterranei str. ATCC 33500 prokMSA_id:576268 FJ868732.1 Isolation Haloarcula and Haloferax alkane-degrading strains uncontaminated ponds (Camargue France) hypersaline pond water sediment interface saltern site isolate 4(1)haloarchaeon str. MSNC 4(1) prokMSA_id:576591 FJ868735.1 Isolation Haloarcula and Haloferax alkane-degrading strains uncontaminated ponds (Camargue France) hypersaline pond water sediment interface saltern site isolate 16(6)haloarchaeon str. MSNC 16(6) prokMSA_id:576691 GQ478071.1 Halorubrum sp. str. CT4-02 prokMSA_id:578516 GQ478065.1 Haloferax sp. str. CS3-1 1.3.3.1.1.8.2 s__Haloferax alexandrinus 39 seqs 1.3.3.1.1.8.2.87 OTU 39 seqs prokMSA_id:47309 AB037474.2 Haloferax alexandrinus str. TM prokMSA_id:74464 D13378.1 Haloferax gibbonsii str. ATCC33959 prokMSA_id:143941 AM176544.1 Haloferax sp. str. HSC4 prokMSA_id:156666 DQ458842.1 Haloferax sp. str. YT226 prokMSA_id:156723 DQ458843.1 Haloferax sp. str. YT228 prokMSA_id:156876 DQ458841.1 Haloferax sp. str. YT216 prokMSA_id:356712 EU308218.1 Haloferax sp. str. FB247_1 prokMSA_id:356819 EU308212.1 Haloferax sp. str. FB25_4 prokMSA_id:356991 EU308223.1 Haloferax sp. str. FB247_6 prokMSA_id:357051 EU308220.1 Haloferax sp. str. FB247_3 prokMSA_id:358159 EU308226.1 Haloferax sp. str. FB247_9 prokMSA_id:359031 EU308216.1 Haloferax sp. str. FB25_8 prokMSA_id:359869 EU308219.1 Haloferax sp. str. FB247_2 prokMSA_id:360611 EU308228.1 Haloferax sp. str. FB247_11 prokMSA_id:360690 EU308221.1 Haloferax sp. str. FB247_4 prokMSA_id:361227 EU308222.1 Haloferax sp. str. FB247_5 prokMSA_id:361512 EU308210.1 Haloferax sp. str. FB25_2 prokMSA_id:361777 EU308209.1 Haloferax sp. str. FB25_1 prokMSA_id:362163 EU308217.1 Haloferax sp. str. FB25_9 prokMSA_id:362493 EU308211.1 Haloferax sp. str. FB25_3 prokMSA_id:362750 EU308225.1 Haloferax sp. str. FB247_8 prokMSA_id:363119 EU308229.1 Haloferax sp. str. FB247_12 prokMSA_id:364096 EU308215.1 Haloferax sp. str. FB25_7 prokMSA_id:364332 EU308231.1 Haloferax sp. str. FB247_14 prokMSA_id:365117 EU308230.1 Haloferax sp. str. FB247_13 prokMSA_id:367161 EU308227.1 Haloferax sp. str. FB247_10 prokMSA_id:367435 EU308213.1 Haloferax sp. str. FB25_5 prokMSA_id:368768 EU308224.1 Haloferax sp. str. FB247_7 prokMSA_id:369309 EU308214.1 Haloferax sp. str. FB25_6 prokMSA_id:528435 GU361124.1 Haloferax sp. str. BejS3 prokMSA_id:545815 GQ478076.1 Haloferax sp. str. CS1-9 prokMSA_id:553036 NR_028213.1 Haloferax gibbonsii str. Ma-2.38; ATCC 33959 prokMSA_id:563547 GQ478073.1 Haloferax sp. str. CS2-1 prokMSA_id:565634 FJ887947.1 Haloferax alexandrinus str. MCMB1203 prokMSA_id:570473 FJ887945.1 Haloferax alexandrinus str. MCMB1201 prokMSA_id:577070 GQ478075.1 Haloferax sp. str. CS1-5 prokMSA_id:579606 GQ478064.1 Haloferax sp. str. CS1-10 prokMSA_id:579700 GQ478069.1 Haloferax sp. str. CT3-7 prokMSA_id:588341 GQ478063.1 Haloferax sp. str. CS1-4 1.3.3.1.1.8.3 s__Haloferax larsenii 3 seqs 1.3.3.1.1.8.3.88 OTU 3 seqs prokMSA_id:110045 AY838278.2 Haloferax zhejiangensis str. ZJ206 prokMSA_id:110548 AY838279.1 Haloferax zhejiangensis str. ZJ204 prokMSA_id:563153 NR_028209.1 Haloferax larsenii str. ZJ206; JCM 13917 1.3.3.1.1.9 g__Halogeometricum 3 seqs 1.3.3.1.1.9.89 OTU 3 seqs prokMSA_id:609 AF002984.1 Halogeometricum borinquense str. PR 3 prokMSA_id:537820 NR_028170.1 Halogeometricum borinquense DSM 11551 str. PR 3; DSM11551 prokMSA_id:559945 FJ609942.1 Halogeometricum sp. str. P92B070208-1P 1.3.4 c__Methanobacteria 1020 seqs 1.3.4.1 o__Methanobacteriales 1020 seqs 1.3.4.1.1 Unclassified 1 seq 1.3.4.1.1.119 OTU 1 seq prokMSA_id:46 M32222.1 Methanothermus fervidus 1.3.4.1.2 f__Methanobacteriaceae 558 seqs 1.3.4.1.2.1 Unclassified 114 seqs 1.3.4.1.2.1.120 OTU 114 seqs prokMSA_id:114 AJ009959.1 Methanobrevibacter sp str. NT7 prokMSA_id:115 AB017514.1 Methanobrevibacter sp str. MB-9 prokMSA_id:21086 AB034188.1 rumen clone 15 prokMSA_id:38084 AB034183.1 rumen clone 956 prokMSA_id:67147 AB084240.1 solid waste landfill clone LCA prokMSA_id:95540 AY196670.1 Methanobrevibacter sp. str. Z4 prokMSA_id:95916 AY196666.1 Methanobrevibacter ruminantium str. M1 prokMSA_id:96058 AY196671.1 Methanobrevibacter sp. str. Z6 prokMSA_id:96980 AY196672.1 Methanobrevibacter sp. str. Z8 prokMSA_id:100034 AY351467.1 rumen fluid sheep fed grain-based diet clone CSIRO2.01 prokMSA_id:100134 AY351480.1 rumen fluid sheep fed grain-based diet clone CSIRO2.14 prokMSA_id:100196 AY351468.1 rumen fluid sheep fed grain-based diet clone CSIRO2.02 prokMSA_id:100287 AY351481.1 rumen fluid sheep fed grain-based diet clone CSIRO2.15 prokMSA_id:100449 AY351482.1 rumen fluid sheep fed grain-based diet clone CSIRO2.16 prokMSA_id:100602 AY351483.1 rumen fluid sheep fed grain-based diet clone CSIRO2.17 prokMSA_id:102367 AY351434.1 rumen fluid sheep grazing on forage clone CSIRO1.01 prokMSA_id:102530 AY351435.1 rumen fluid sheep grazing on forage clone CSIRO1.02 prokMSA_id:102684 AY351436.1 rumen fluid sheep grazing on forage clone CSIRO1.03 prokMSA_id:104130 AJ550157.1 Methanobrevibacter sp. str. FM1 prokMSA_id:105405 AY351479.1 rumen fluid sheep fed grain-based diet clone CSIRO2.13 prokMSA_id:105513 AY351492.1 rumen fluid sheep fed quality grain-based diet clone CSIRO3.04 prokMSA_id:130778 AY615201.1 Methanobrevibacter sp. str. KM1H5-1P prokMSA_id:130933 AY615204.1 Methanobrevibacter sp. str. 62 prokMSA_id:131294 AY615205.1 Methanobrevibacter sp. str. 30Y prokMSA_id:138596 AY615202.1 Methanobrevibacter sp. str. AK-87 prokMSA_id:139427 AB233297.1 Arcaheal methanogenic sludges UASB granular sludge clone CG-7 prokMSA_id:139625 AB236061.1 Archaeal anaerobic pond sediment clone SP--B prokMSA_id:139642 AB236091.1 Archaeal anaerobic rice paddy soil clone TNR-H2-C prokMSA_id:139869 AB236053.1 Archaeal anaerobic rice paddy soil clone NR-H2 prokMSA_id:139922 AB236058.1 Archaeal anaerobic pond sediment clone SP-H2 prokMSA_id:139931 AB236065.1 Archaeal anaerobic pond sediment clone SP-Pro prokMSA_id:139998 AB236090.1 Archaeal anaerobic rice paddy soil clone TNR-H2-B prokMSA_id:140316 AB236064.1 Archaeal anaerobic pond sediment clone SP-Buty-B prokMSA_id:140379 AB236071.1 Archaeal anaerobic river sediment clone AR prokMSA_id:140448 AB237740.1 microorganisms deep subsurface groundwater sedimentary rock milieu clone HDBW-WA07 prokMSA_id:140568 AB236089.1 Archaeal anaerobic rice paddy soil clone TNR-H2 prokMSA_id:140592 AB236048.1 Archaeal anaerobic marine sediment clone KO-H2 prokMSA_id:151253 DQ402013.1 methanogens goat rumen clone 5 prokMSA_id:151893 DQ402022.1 methanogens goat rumen clone 14 prokMSA_id:152271 DQ372973.1 methanogens anaerobic fungal clone 4 prokMSA_id:153168 DQ372974.1 methanogens anaerobic fungal clone 5 prokMSA_id:153614 AY995294.1 methanogens sheep Queensland Australia rumen clone CSIRO-QD02 prokMSA_id:154310 DQ402020.1 methanogens goat rumen clone 12 prokMSA_id:155631 DQ402014.1 methanogens goat rumen clone 6 prokMSA_id:164134 DQ123873.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.01 prokMSA_id:165918 DQ123866.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone PE-CAN.06 prokMSA_id:166103 DQ123876.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.04 prokMSA_id:166443 DQ649335.1 Methanobacterium alcaliphilum str. DSM3387 prokMSA_id:172990 DQ123864.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone PE-CAN.04 prokMSA_id:174192 DQ985541.1 methanogenic Archaea co- anaerobic fungi goat rumen clone 3 prokMSA_id:175897 DQ985543.1 methanogenic Archaea co- anaerobic fungi goat rumen clone 6 prokMSA_id:176592 EF055522.1 methanogens rumen Jinnan cattle clone LGMJN33 prokMSA_id:178441 EF157706.1 methanogens primers rumen Jinnan cattle clone JNC6 prokMSA_id:180170 DQ867048.1 Microbial and methanogenic potential temperature water Japan natural gas field clone NAK1-a1 prokMSA_id:180852 DQ985549.1 methanogenic Archaea co- anaerobic fungi goat rumen clone 12 prokMSA_id:181263 DQ985546.1 methanogenic Archaea co- anaerobic fungi goat rumen clone 9 prokMSA_id:181784 DQ985544.1 methanogenic Archaea co- anaerobic fungi goat rumen clone 7 prokMSA_id:184358 DQ985547.1 methanogenic Archaea co- anaerobic fungi goat rumen clone 10 prokMSA_id:185169 EF055519.1 methanogens rumen Jinnan cattle clone LGMJN30 prokMSA_id:187823 DQ985539.1 methanogenic Archaea co- anaerobic fungi goat rumen clone 1 prokMSA_id:188242 EF055516.1 methanogens rumen Jinnan cattle clone LGMJN27 prokMSA_id:190545 DQ985538.1 methanogenic Archaea co- anaerobic fungi goat rumen clone 2 prokMSA_id:192098 DQ985545.1 methanogenic Archaea co- anaerobic fungi goat rumen clone 8 prokMSA_id:194315 DQ985542.1 methanogenic Archaea co- anaerobic fungi goat rumen clone 5 prokMSA_id:194581 EF157707.1 methanogens primers rumen Jinnan cattle clone JNC7 prokMSA_id:195097 EF055523.1 methanogens rumen Jinnan cattle clone LGMJN34 prokMSA_id:195411 DQ841242.1 Microbial deep subsurface gas- water Minami-kanto Japan natural gas field clone MOB7-7 prokMSA_id:195671 EF055520.1 methanogens rumen Jinnan cattle clone LGMJN31 prokMSA_id:198172 DQ841230.1 natural gas field clone MOB4-4 prokMSA_id:198543 DQ841224.1 Microbial deep subsurface gas- water Minami-kanto Japan natural gas field clone MOB4-3 prokMSA_id:198855 EF055521.1 methanogens rumen Jinnan cattle clone LGMJN32 prokMSA_id:198903 DQ985550.1 methanogenic Archaea co- anaerobic fungi goat rumen clone 13 prokMSA_id:199444 EF157704.1 methanogens primers rumen Jinnan cattle clone JNC5 prokMSA_id:199482 DQ985548.1 methanogenic Archaea co- anaerobic fungi goat rumen clone 11 prokMSA_id:215225 AB294252.1 Microbial structure deep coal seem groundwater clone YWA04 prokMSA_id:218076 DQ519580.1 identification methanogens sheep Venezuela rumen clone Ven-05 prokMSA_id:221824 DQ519587.1 identification methanogens sheep Venezuela rumen clone Ven-12 prokMSA_id:221963 EF467856.1 gastrointestinal Archaea intestine clone 4 prokMSA_id:223840 EF467855.1 gastrointestinal Archaea intestine clone 5 prokMSA_id:224751 DQ519579.1 identification methanogens sheep Venezuela rumen clone Ven-04 prokMSA_id:225515 DQ519588.1 identification methanogens sheep Venezuela rumen clone Ven-13 prokMSA_id:226008 DQ519577.1 identification methanogens sheep Venezuela rumen clone Ven-02 prokMSA_id:226808 DQ519585.1 identification methanogens sheep Venezuela rumen clone Ven-10 prokMSA_id:228377 EF584761.1 Archaea rumen goat clone 5 prokMSA_id:230246 EF584770.1 Archaea rumen goat clone 14 prokMSA_id:230598 EF584766.1 Archaea rumen goat clone 10 prokMSA_id:230854 EF584769.1 Archaea rumen goat clone 13 prokMSA_id:231898 EF541181.1 archaea Jinnan cattle rumen clone 1 prokMSA_id:234700 EF584760.1 Archaea rumen goat clone 4 prokMSA_id:234889 EF584763.1 Archaea rumen goat clone 7 prokMSA_id:235907 EF653448.1 archaea goat rumen clone 15 prokMSA_id:246686 EU333914.2 Methanobacterium sp. str. GH prokMSA_id:258504 EU366499.1 Methanobacterium sp. str. TS2 prokMSA_id:262662 EU413583.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE27 prokMSA_id:268360 EU413634.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetG6 prokMSA_id:272601 EU413584.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE28 prokMSA_id:274858 EU413637.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetG9 prokMSA_id:303948 EU547215.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-11 prokMSA_id:312840 EU547223.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-31 prokMSA_id:319390 EU161638.1 Rumen methanogens lactating dairy cattle Ontario Canada rumen clone UG3322.2 prokMSA_id:322002 EU547214.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-10 prokMSA_id:326312 EU547210.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-01 prokMSA_id:333327 EU547228.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-37 prokMSA_id:336134 EU547226.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-35 prokMSA_id:339331 EU547232.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-45 prokMSA_id:347459 EU547222.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-28 prokMSA_id:348098 EU547225.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-34 prokMSA_id:353239 EU547212.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-08 prokMSA_id:354885 EU547220.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-26 prokMSA_id:356464 EU547221.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-27 prokMSA_id:522113 AB539931.1 Evidence syntrophic acetate oxidation coupled hydrogenotrophic methanogenesis -temperature petroleum reservoir Yabase oil field clone YAB2A11 prokMSA_id:530035 AB539929.1 Evidence syntrophic acetate oxidation coupled hydrogenotrophic methanogenesis -temperature petroleum reservoir Yabase oil field clone YAB3A23 prokMSA_id:559832 AB539925.1 Evidence syntrophic acetate oxidation coupled hydrogenotrophic methanogenesis -temperature petroleum reservoir Yabase oil field clone AR80A50 prokMSA_id:566179 AB496639.1 Methanobacterium alcaliphilum str. NBRC 105226 1.3.4.1.2.2 g__Methanobacterium 120 seqs 1.3.4.1.2.2.1 Unclassified 63 seqs 1.3.4.1.2.2.1.121 OTU 63 seqs prokMSA_id:133 X99044.1 Methanobacterium subterraneum str. A8p DSM 11074 prokMSA_id:134 AF028689.1 Methanobacterium formicicum str. FCam prokMSA_id:136 X99045.1 Methanobacterium subterraneum str. C2BIS DSM 11075 prokMSA_id:204 AF093061.1 Methanobacterium palustre str. DSM 3108; F prokMSA_id:18599 AF276958.1 Methanobacterium curvum prokMSA_id:40123 AF028690.2 Methanobacterium oryzae str. FPi prokMSA_id:44183 AF233586.1 Methanobacterium congolense str. C prokMSA_id:77878 AJ459882.1 bog peat clone AEC 3 M71 prokMSA_id:77966 AJ459884.1 bog peat clone AEC 2 M46 prokMSA_id:78121 AJ459876.1 bog peat clone AMC 3 M14 prokMSA_id:84255 AY251026.1 freshwater sediment clone 15ar16 prokMSA_id:99797 AY386124.1 Methanobacterium aarhusense str. H2-LR prokMSA_id:105600 AY695843.1 Methanobacterium sp. str. SA-12 prokMSA_id:107453 AY426480.1 full-scale anaerobic UASB bioreactor treating paper mill wastewater clone 1G1 prokMSA_id:108763 AY796044.1 gold mine bore hole clone 47mm76 prokMSA_id:138937 AB233307.1 Arcaheal methanogenic sludges anaerobic digested sludge clone ND-H2-ARC-1 prokMSA_id:138994 AB233294.1 Arcaheal methanogenic sludges UASB granular sludge clone CG-4 prokMSA_id:139330 AB233308.1 Arcaheal methanogenic sludges anaerobic digested sludge clone ND--ARC-1 prokMSA_id:139423 AB233293.1 Arcaheal methanogenic sludges UASB granular sludge clone CG-3 prokMSA_id:139521 AB236063.1 Archaeal anaerobic pond sediment clone SP-Buty prokMSA_id:139545 AB236092.1 Archaeal anaerobic rice paddy soil clone TNR prokMSA_id:139606 AB236080.1 Archaeal anaerobic lake sediment clone SL-Buty prokMSA_id:139661 AB236059.1 Archaeal anaerobic pond sediment clone SP-H2-B prokMSA_id:139694 AB236069.1 Archaeal anaerobic river sediment clone AR-H2-B prokMSA_id:139875 AB236099.1 Archaeal anaerobic lotus field sediment clone LF--B prokMSA_id:139882 AB236056.1 Archaeal anaerobic rice paddy soil clone NR-Buty prokMSA_id:139895 AB236086.1 Archaeal mesophilic anaerobic granular sludge clone MP prokMSA_id:139916 AB236079.1 Archaeal anaerobic lake sediment clone SL-Eth-B prokMSA_id:140147 AB236098.1 Archaeal anaerobic lotus field sediment clone LF prokMSA_id:140179 AB236100.1 Archaeal anaerobic lotus field sediment clone LF-Eth prokMSA_id:140254 AB236084.1 Archaeal mesophilic anaerobic granular sludge clone MP-H2 prokMSA_id:140304 AB236077.1 Archaeal anaerobic lake sediment clone SL prokMSA_id:140309 AB236072.1 Archaeal anaerobic river sediment clone AR--B prokMSA_id:140378 AB236068.1 Archaeal anaerobic river sediment clone AR-H2 prokMSA_id:140488 AB236060.1 Archaeal anaerobic pond sediment clone SP prokMSA_id:140560 AB236117.1 Archaeal anaerobic rice paddy soil clone SRP-Buty-B prokMSA_id:140615 AB236097.1 Archaeal anaerobic lotus field sediment clone LF-H2-B prokMSA_id:140686 AB236074.1 Archaeal anaerobic river sediment clone AR-Buty prokMSA_id:141406 AB243792.1 Archaeal anaerobic rice paddy soil clone NRP prokMSA_id:156587 DQ447182.1 Coexistence homoacetogens and heterotrophic sulfate-reducing synthesis gas fed lab-scale reactor clone 4F11 prokMSA_id:162019 AB266900.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone N2A39fl prokMSA_id:163396 DQ649330.2 Methanobacterium subterraneum str. 9-7 prokMSA_id:164244 AB266903.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone QpjA59fl prokMSA_id:170726 DQ649334.1 Methanobacterium aarhusense str. 5-4 prokMSA_id:171572 AB266902.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone N2A72fl prokMSA_id:173605 AB266895.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone SwA77fl prokMSA_id:195438 DQ867042.1 Microbial and methanogenic potential temperature water Japan natural gas field clone NAK2-a1 prokMSA_id:208156 DQ339715.1 assessment complex microbial degrading long chain fatty acids (LCFA) methanogenic bioreactors anaerobic sludge submitted extended contact LCFA clone lcfa_Ac06 prokMSA_id:208655 DQ339716.1 assessment complex microbial degrading long chain fatty acids (LCFA) methanogenic bioreactors anaerobic sludge submitted extended contact LCFA clone lcfa_Ab25 prokMSA_id:214422 AB294251.1 Microbial structure deep coal seem groundwater clone YWA03 prokMSA_id:217011 DQ339717.1 assessment complex microbial degrading long chain fatty acids (LCFA) methanogenic bioreactors anaerobic sludge submitted extended contact LCFA clone lcfa_Ab57 prokMSA_id:218697 DQ677518.1 Methanobacterium sp. str. MB4 prokMSA_id:221263 AB302952.1 Methanobacterium sp. str. F prokMSA_id:232661 EF112196.1 Methanobacterium sp. str. YCM1 prokMSA_id:249915 AB368917.1 Methanobacterium sp. str. 169 prokMSA_id:539277 AB479402.1 Isolation Methanomicrobiales methanogen mesophilic methanogenic granular sludge clone SMS-sludge-11 prokMSA_id:550445 AB447791.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0220_083 prokMSA_id:551498 AB447766.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0219_014 prokMSA_id:554059 AB447819.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_052 prokMSA_id:556707 NR_028175.1 Methanobacterium congolense str. C; DSM 7095 prokMSA_id:563463 AB447832.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_083 prokMSA_id:565439 AB447823.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_062 prokMSA_id:587755 AB447831.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_081 1.3.4.1.2.2.2 s__Methanobacterium beijingense 11 seqs 1.3.4.1.2.2.2.122 OTU 11 seqs prokMSA_id:203 U81775.2 anaerobic digestor clone vadinDC06 prokMSA_id:92357 AY350742.1 Methanobacterium sp. str. 8-2 prokMSA_id:99092 AY426484.1 full-scale anaerobic UASB bioreactor treating paper mill wastewater clone 2C4 prokMSA_id:99275 AJ576231.1 landfill leachate clone GZK52 prokMSA_id:101553 AY552778.3 Methanobacterium beijingense str. 4-1 prokMSA_id:103640 AY426478.1 full-scale anaerobic UASB bioreactor treating paper mill wastewater clone 1C11 prokMSA_id:162124 AB266897.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone N1A30fl prokMSA_id:319126 FJ167432.1 microbiology granular sludge under autotrophic mixotrophic and heterotrophic denitrification conditions denitrifying bioreactor clone R1A-4 prokMSA_id:345030 FJ167436.1 microbiology granular sludge under autotrophic mixotrophic and heterotrophic denitrification conditions denitrifying bioreactor clone R2A-4 prokMSA_id:384442 FJ971743.1 microbial autrotrophic denitrification granular sludge clone E-A2 prokMSA_id:565906 NR_028202.1 Methanobacterium beijingense str. 8-2; DSM 15999 1.3.4.1.2.2.3 s__Methanobacterium bryantii 19 seqs 1.3.4.1.2.2.3.123 OTU 19 seqs prokMSA_id:79 AF028688.1 Methanobacterium bryantii str. RiH2 prokMSA_id:96099 AY196658.1 Methanobacterium bryantii str. MOHG prokMSA_id:97471 AY196657.1 Methanobacterium bryantii str. MOH prokMSA_id:109776 AB181817.1 Methanobacterium sp. str. Ps21 prokMSA_id:109980 AB181819.1 Methanobacterium sp. str. Tc3 prokMSA_id:110257 AB181818.1 Methanobacterium sp. str. Mg38 prokMSA_id:139506 AB236114.1 Archaeal anaerobic rice paddy soil clone SRP prokMSA_id:139554 AB236093.1 Archaeal anaerobic rice paddy soil clone TNR--B prokMSA_id:139600 AB236113.1 Archaeal anaerobic rice paddy soil clone SRP-H2 prokMSA_id:139743 AB236070.1 Archaeal anaerobic river sediment clone AR-H2-C prokMSA_id:139792 AB236062.1 Archaeal anaerobic pond sediment clone SP-Eth prokMSA_id:140025 AB236078.1 Archaeal anaerobic lake sediment clone SL-Eth prokMSA_id:140505 AB236109.1 Archaeal anaerobic rice paddy soil clone NRP prokMSA_id:140511 AB236108.1 Archaeal anaerobic rice paddy soil clone NRP-H2 prokMSA_id:140604 AB236116.1 Archaeal anaerobic rice paddy soil clone SRP-Eth-B prokMSA_id:140709 AB236095.1 Archaeal anaerobic rice paddy soil clone TNR-Eth prokMSA_id:160478 DQ517520.1 Methanobacterium sp. M2 prokMSA_id:168632 DQ649331.1 Methanobacterium sp. str. Ch prokMSA_id:211622 EF016285.2 Methanobacterium sp. str. MK4 1.3.4.1.2.2.4 s__Methanobacterium formicicum 21 seqs 1.3.4.1.2.2.4.124 OTU 21 seqs prokMSA_id:198 M36508.1 Methanobacterium formicicum prokMSA_id:97554 AY196659.1 Methanobacterium formicicum str. MF prokMSA_id:99134 AJ550160.1 Methanobacterium sp. str. OM15 prokMSA_id:104441 AJ550159.1 Methanobacterium sp. str. C5/51 prokMSA_id:111507 AF169245.1 Methanobacterium formicicum str. DSMZ1535 prokMSA_id:140188 AB236055.1 Archaeal anaerobic rice paddy soil clone NR-Eth-B prokMSA_id:163414 DQ649309.1 Methanobacterium formicicum str. S1 prokMSA_id:203577 AB288281.1 Methanobacterium sp. T11 prokMSA_id:206891 AB288272.1 Methanoculleus sp. M06 prokMSA_id:208869 AB288275.1 Methanobacterium sp. T01 prokMSA_id:212203 AB288265.1 Methanobacterium sp. HD-1 prokMSA_id:216405 AB288271.1 Methanobacterium sp. M03 prokMSA_id:549801 AB447877.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_092 prokMSA_id:560797 AB447862.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_064 prokMSA_id:561629 AB447799.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0219_028 prokMSA_id:564374 AB447838.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_090 prokMSA_id:566640 EU828448.1 Microbial effects changeover without CO2 sparging two-stage biological and process second-stage methane reactor (after hydrogen producing bioreactor) clone T1_18 prokMSA_id:569820 NR_025028.1 Methanobacterium formicicum str. DSMZ1535 prokMSA_id:573119 AB447795.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0215_077 prokMSA_id:585598 AB447801.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0219_073 prokMSA_id:593282 AB447783.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0220_068 1.3.4.1.2.2.5 s__Methanobacterium palustre 6 seqs 1.3.4.1.2.2.5.125 OTU 6 seqs prokMSA_id:139496 AB236054.1 Archaeal anaerobic rice paddy soil clone NR prokMSA_id:165122 DQ649333.1 Methanobacterium palustre str. 21 prokMSA_id:173478 DQ649332.1 Methanobacterium palustre str. Z2 prokMSA_id:221354 AB302950.1 Isolation and methanogenic archaea Japanese paddy field soil prokMSA_id:223809 AB302951.1 Isolation and methanogenic archaea Japanese paddy field soil prokMSA_id:567213 EU293795.1 Methanobacterium palustre str. FG694aF 1.3.4.1.2.3 g__Methanobrevibacter 234 seqs 1.3.4.1.2.3.1 Unclassified 213 seqs 1.3.4.1.2.3.1.126 OTU 213 seqs prokMSA_id:86 U55237.1 Methanobrevibacter woesei str. GS prokMSA_id:124 U55236.1 Methanobrevibacter thaueri str. CW prokMSA_id:125 U55238.1 Methanobrevibacter gottschalkii str. HO prokMSA_id:126 U55239.1 Methanobrevibacter gottschalkii str. PG prokMSA_id:127 U55240.1 Methanobrevibacter wolinii str. SH prokMSA_id:128 U55241.1 Methanobrevibacter sp str. RT prokMSA_id:130 AJ009958.1 Methanobrevibacter sp str. SM9 prokMSA_id:138 U41095.1 Methanobrevibacter cuticularis str. RFM-1 prokMSA_id:139 U82322.1 Methanobrevibacter filiformis str. RFM-3 prokMSA_id:150 U62533.1 Methanobrevibacter curvatus str. RFM-2 prokMSA_id:22694 AF242652.1 Methanobrevibacter acididurans str. ATM prokMSA_id:29783 AB034185.1 rumen clone M6 prokMSA_id:94242 AB118591.1 Endosymbiont 'TS1' Trimyema compressum clone TS1 prokMSA_id:95844 AY196673.1 Methanobrevibacter sp. str. ZA-10 prokMSA_id:97004 AY196663.1 Methanobrevibacter arboriphilus str. AZ prokMSA_id:98950 AY351460.1 rumen fluid sheep grazing on forage clone CSIRO1.27 prokMSA_id:98996 AY351448.1 rumen fluid sheep grazing on forage clone CSIRO1.15 prokMSA_id:99096 AY351461.1 rumen fluid sheep grazing on forage clone CSIRO1.28 prokMSA_id:99156 AY351449.1 rumen fluid sheep grazing on forage clone CSIRO1.16 prokMSA_id:99249 AY351462.1 rumen fluid sheep grazing on forage clone CSIRO1.29 prokMSA_id:99411 AY351463.1 rumen fluid sheep grazing on forage clone CSIRO1.30 prokMSA_id:99563 AY351464.1 rumen fluid sheep grazing on forage clone CSIRO1.31 prokMSA_id:99717 AY351465.1 rumen fluid sheep grazing on forage clone CSIRO1.32 prokMSA_id:100349 AY351469.1 rumen fluid sheep fed grain-based diet clone CSIRO2.03 prokMSA_id:100752 AY351484.1 rumen fluid sheep fed grain-based diet clone CSIRO2.18 prokMSA_id:100911 AY351485.1 rumen fluid sheep fed grain-based diet clone CSIRO2.19 prokMSA_id:101073 AY351486.1 rumen fluid sheep fed grain-based diet clone CSIRO2.20 prokMSA_id:101235 AY351487.1 rumen fluid sheep fed grain-based diet clone CSIRO2.21 prokMSA_id:101398 AY351488.1 rumen fluid sheep fed grain-based diet clone CSIRO2.22 prokMSA_id:101399 AY351500.1 rumen fluid sheep fed quality grain-based diet clone CSIRO3.12 prokMSA_id:101570 AY351489.1 rumen fluid sheep fed quality grain-based diet clone CSIRO3.01 prokMSA_id:102931 AY351450.1 rumen fluid sheep grazing on forage clone CSIRO1.17 prokMSA_id:103075 AY351451.1 rumen fluid sheep grazing on forage clone CSIRO1.18 prokMSA_id:103131 AY351439.1 rumen fluid sheep grazing on forage clone CSIRO1.06 prokMSA_id:103224 AY351452.1 rumen fluid sheep grazing on forage clone CSIRO1.19 prokMSA_id:103372 AY351453.1 rumen fluid sheep grazing on forage clone CSIRO1.20 prokMSA_id:103512 AY351454.1 rumen fluid sheep grazing on forage clone CSIRO1.21 prokMSA_id:103645 AY351455.1 rumen fluid sheep grazing on forage clone CSIRO1.22 prokMSA_id:103795 AY351456.1 rumen fluid sheep grazing on forage clone CSIRO1.23 prokMSA_id:103939 AY351457.1 rumen fluid sheep grazing on forage clone CSIRO1.24 prokMSA_id:103975 AJ550156.1 Methanobrevibacter sp. str. AbM4 prokMSA_id:104088 AY351458.1 rumen fluid sheep grazing on forage clone CSIRO1.25 prokMSA_id:104192 AY351471.1 rumen fluid sheep fed grain-based diet clone CSIRO2.05 prokMSA_id:104348 AY351472.1 rumen fluid sheep fed grain-based diet clone CSIRO2.06 prokMSA_id:104507 AY351473.1 rumen fluid sheep fed grain-based diet clone CSIRO2.07 prokMSA_id:104658 AY351474.1 rumen fluid sheep fed grain-based diet clone CSIRO2.08 prokMSA_id:104804 AY351475.1 rumen fluid sheep fed grain-based diet clone CSIRO2.09 prokMSA_id:104945 AY351476.1 rumen fluid sheep fed grain-based diet clone CSIRO2.10 prokMSA_id:105094 AY351477.1 rumen fluid sheep fed grain-based diet clone CSIRO2.11 prokMSA_id:105197 AY351490.1 rumen fluid sheep fed quality grain-based diet clone CSIRO3.02 prokMSA_id:105255 AY351478.1 rumen fluid sheep fed grain-based diet clone CSIRO2.12 prokMSA_id:105357 AY351491.1 rumen fluid sheep fed quality grain-based diet clone CSIRO3.03 prokMSA_id:105658 AY351493.1 rumen fluid sheep fed quality grain-based diet clone CSIRO3.05 prokMSA_id:105811 AY351494.1 rumen fluid sheep fed quality grain-based diet clone CSIRO3.06 prokMSA_id:105963 AY351495.1 rumen fluid sheep fed quality grain-based diet clone CSIRO3.07 prokMSA_id:106111 AY351496.1 rumen fluid sheep fed quality grain-based diet clone CSIRO3.08 prokMSA_id:106432 AY351498.1 rumen fluid sheep fed quality grain-based diet clone CSIRO3.10 prokMSA_id:106590 AY351499.1 rumen fluid sheep fed quality grain-based diet clone CSIRO3.11 prokMSA_id:106760 AY351440.1 rumen fluid sheep grazing on forage clone CSIRO1.07 prokMSA_id:106912 AY351441.1 rumen fluid sheep grazing on forage clone CSIRO1.08 prokMSA_id:107070 AY351442.1 rumen fluid sheep grazing on forage clone CSIRO1.09 prokMSA_id:107365 AY351444.1 rumen fluid sheep grazing on forage clone CSIRO1.11 prokMSA_id:107510 AY351445.1 rumen fluid sheep grazing on forage clone CSIRO1.12 prokMSA_id:107657 AY351446.1 rumen fluid sheep grazing on forage clone CSIRO1.13 prokMSA_id:107802 AY351447.1 rumen fluid sheep grazing on forage clone CSIRO1.14 prokMSA_id:109790 AB181816.1 Methanobrevibacter sp. str. Mc30 prokMSA_id:138045 DQ135988.1 Methanobrevibacter sp. str. 1Y prokMSA_id:145513 AB244742.1 Microbial Mesophilic Anaerobic Glycerol Degradation Process Chemostat Cultivation mesophilic anaerobic glycerol-fed reactor clone GLY1A02 prokMSA_id:152365 AY995283.1 methanogens sheep Queensland Australia rumen clone CSIRO-QB04 prokMSA_id:152450 DQ402010.1 methanogens goat rumen clone 2 prokMSA_id:152656 AY995278.1 methanogens sheep Queensland Australia rumen clone CSIRO-QA05 prokMSA_id:153958 AY995276.1 methanogens sheep Queensland Australia rumen clone CSIRO-QA02 prokMSA_id:160868 AM269413.2 Methanobrevibacter sp. 87.7 prokMSA_id:163015 DQ123878.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.08 prokMSA_id:163798 DQ123867.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone PE-CAN.07 prokMSA_id:163840 DQ123881.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.11 prokMSA_id:164714 DQ123865.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone PE-CAN.05 prokMSA_id:166729 DQ123871.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone PE-CAN.11 prokMSA_id:167356 AB266911.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone KsuA23fl prokMSA_id:169054 DQ123882.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.12 prokMSA_id:171167 DQ123863.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone PE-CAN.03 prokMSA_id:174148 EF055496.1 methanogens rumen Jinnan cattle clone LGMJN7 prokMSA_id:174653 EF055504.1 methanogens rumen Jinnan cattle clone LGMJN15 prokMSA_id:174677 EF055500.1 methanogens rumen Jinnan cattle clone LGMJN11 prokMSA_id:176249 EF157700.1 methanogens primers rumen Jinnan cattle clone JNC4 prokMSA_id:177114 EF055509.1 methanogens rumen Jinnan cattle clone LGMJN20 prokMSA_id:177638 EF157689.1 methanogens primers rumen Jinnan cattle clone JNC1 prokMSA_id:178446 EF055507.1 methanogens rumen Jinnan cattle clone LGMJN18 prokMSA_id:178710 EF157696.1 methanogens primers rumen Jinnan cattle clone JNC3 prokMSA_id:178749 EF055510.1 methanogens rumen Jinnan cattle clone LGMJN21 prokMSA_id:179640 EF055492.1 methanogens rumen Jinnan cattle clone LGMJN3 prokMSA_id:179803 EF055503.1 methanogens rumen Jinnan cattle clone LGMJN14 prokMSA_id:181697 EF055493.1 methanogens rumen Jinnan cattle clone LGMJN4 prokMSA_id:183263 EF055502.1 methanogens rumen Jinnan cattle clone LGMJN13 prokMSA_id:184468 EF055497.1 methanogens rumen Jinnan cattle clone LGMJN8 prokMSA_id:185780 EF055518.1 methanogens rumen Jinnan cattle clone LGMJN29 prokMSA_id:185921 EF055511.1 methanogens rumen Jinnan cattle clone LGMJN22 prokMSA_id:186301 EF055491.1 methanogens rumen Jinnan cattle clone LGMJN2 prokMSA_id:186816 EF055506.1 methanogens rumen Jinnan cattle clone LGMJN17 prokMSA_id:187601 EF055494.1 methanogens rumen Jinnan cattle clone LGMJN5 prokMSA_id:191099 EF055505.1 methanogens rumen Jinnan cattle clone LGMJN16 prokMSA_id:191215 EF055495.1 methanogens rumen Jinnan cattle clone LGMJN6 prokMSA_id:191666 EF157695.1 methanogens primers rumen Jinnan cattle clone JNC2 prokMSA_id:192134 EF055501.1 methanogens rumen Jinnan cattle clone LGMJN12 prokMSA_id:192417 EF055512.1 methanogens rumen Jinnan cattle clone LGMJN23 prokMSA_id:193593 EF055498.1 methanogens rumen Jinnan cattle clone LGMJN9 prokMSA_id:194147 EF055508.1 methanogens rumen Jinnan cattle clone LGMJN19 prokMSA_id:194161 EF055513.1 methanogens rumen Jinnan cattle clone LGMJN24 prokMSA_id:198249 EF055499.1 methanogens rumen Jinnan cattle clone LGMJN10 prokMSA_id:199031 EF055490.1 methanogens rumen Jinnan cattle clone LGMJN1 prokMSA_id:218849 DQ519576.1 identification methanogens sheep Venezuela rumen clone Ven-01 prokMSA_id:219308 EF467857.1 gastrointestinal Archaea intestine clone 6 prokMSA_id:220008 DQ519582.1 identification methanogens sheep Venezuela rumen clone Ven-07 prokMSA_id:220741 DQ519590.1 identification methanogens sheep Venezuela rumen clone Ven-15 prokMSA_id:220977 EF467853.1 gastrointestinal Archaea intestine clone 1 prokMSA_id:221174 DQ519581.1 identification methanogens sheep Venezuela rumen clone Ven-06 prokMSA_id:221937 DQ519584.1 identification methanogens sheep Venezuela rumen clone Ven-09 prokMSA_id:223430 DQ519589.1 identification methanogens sheep Venezuela rumen clone Ven-14 prokMSA_id:224596 DQ519578.1 identification methanogens sheep Venezuela rumen clone Ven-03 prokMSA_id:226334 DQ519586.1 identification methanogens sheep Venezuela rumen clone Ven-11 prokMSA_id:227795 EF541183.1 archaea Jinnan cattle rumen clone 3 prokMSA_id:228569 EF584768.1 Archaea rumen goat clone 12 prokMSA_id:228574 EF584762.1 Archaea rumen goat clone 6 prokMSA_id:228767 EF584759.1 Archaea rumen goat clone 3 prokMSA_id:229785 EF584767.1 Archaea rumen goat clone 11 prokMSA_id:232301 EF584757.1 Archaea rumen goat clone 1 prokMSA_id:234006 EF541186.1 archaea Jinnan cattle rumen clone 6 prokMSA_id:263779 EU413636.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetG8 prokMSA_id:264241 EU413632.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetG4 prokMSA_id:264890 EU413569.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetA1 prokMSA_id:269563 EU413654.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetG32 prokMSA_id:269841 EU413628.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetF49 prokMSA_id:270955 EU413589.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE34 prokMSA_id:272628 EU413610.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetF18 prokMSA_id:274142 EU413608.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetF16 prokMSA_id:274955 EU413607.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetF14 prokMSA_id:275068 EU413590.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE35 prokMSA_id:276804 EU413581.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE25 prokMSA_id:277327 EU413630.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetG2 prokMSA_id:303447 EU093108.1 Targeting anti-methanogen vaccine methanogen populations reduce methane output sheep rumen digesta clone CSIRO-WA21 prokMSA_id:304009 EU831387.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.20 prokMSA_id:307876 EU161639.1 Rumen methanogens lactating dairy cattle Ontario Canada rumen clone UG3349.5 prokMSA_id:308785 EU831371.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.04 prokMSA_id:309044 EU831374.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.07 prokMSA_id:309202 EU831384.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.17 prokMSA_id:309343 EU831392.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.25 prokMSA_id:309878 EU831386.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.19 prokMSA_id:310063 EU093104.1 Targeting anti-methanogen vaccine methanogen populations reduce methane output sheep rumen digesta clone CSIRO-WA14 prokMSA_id:310728 EU831398.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.31 prokMSA_id:314596 EU831388.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.21 prokMSA_id:314940 EU831379.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.12 prokMSA_id:315724 EU831373.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.06 prokMSA_id:317420 EU831385.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.18 prokMSA_id:318203 EU093105.1 Targeting anti-methanogen vaccine methanogen populations reduce methane output sheep rumen digesta clone CSIRO-WA15 prokMSA_id:318516 EU831389.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.22 prokMSA_id:318654 EU831383.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.16 prokMSA_id:324900 EU831378.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.11 prokMSA_id:325010 EU831396.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.29 prokMSA_id:325582 EU831391.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.24 prokMSA_id:325785 EU831375.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.08 prokMSA_id:325931 EU831380.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.13 prokMSA_id:326228 EU093107.1 Targeting anti-methanogen vaccine methanogen populations reduce methane output sheep rumen digesta clone CSIRO-WA20 prokMSA_id:331049 EU831381.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.14 prokMSA_id:332960 EU831372.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.05 prokMSA_id:336546 EU831376.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.09 prokMSA_id:339306 EU831382.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.15 prokMSA_id:341943 EU093103.1 Targeting anti-methanogen vaccine methanogen populations reduce methane output sheep rumen digesta clone CSIRO-WA13 prokMSA_id:342486 EU093106.1 Targeting anti-methanogen vaccine methanogen populations reduce methane output sheep rumen digesta clone CSIRO-WA18 prokMSA_id:342997 EU831393.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.26 prokMSA_id:346831 EU831395.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.28 prokMSA_id:347916 EU831399.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.32 prokMSA_id:348180 EU093110.1 Targeting anti-methanogen vaccine methanogen populations reduce methane output sheep rumen digesta clone CSIRO-WA23 prokMSA_id:349278 EU161641.1 Rumen methanogens lactating dairy cattle Ontario Canada rumen clone UG3340.9 prokMSA_id:349335 EU831377.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.10 prokMSA_id:349896 EU831356.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.35 prokMSA_id:351883 EU831401.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.34 prokMSA_id:352033 EU831394.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.27 prokMSA_id:354045 EU831397.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.30 prokMSA_id:354700 EU831400.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.33 prokMSA_id:354837 EU831370.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.03 prokMSA_id:510217 FJ919270.1 mechanism methanogenesis rumen clone M21 prokMSA_id:510940 FJ938087.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 11 prokMSA_id:510989 FJ919274.1 mechanism methanogenesis rumen clone M25 prokMSA_id:512650 FJ938084.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 8 prokMSA_id:513673 FJ938081.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 5 prokMSA_id:532641 FJ938100.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 24 prokMSA_id:535136 FJ938090.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 14 prokMSA_id:536127 FJ919275.1 mechanism methanogenesis rumen clone M26 prokMSA_id:536317 FJ938094.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 18 prokMSA_id:538494 FJ919271.1 mechanism methanogenesis rumen clone M22 prokMSA_id:539612 FJ938106.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 30 prokMSA_id:539682 FJ919279.1 mechanism methanogenesis rumen clone M30 prokMSA_id:542495 FJ938091.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 15 prokMSA_id:542559 FJ938096.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 20 prokMSA_id:543261 FJ938099.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 23 prokMSA_id:543588 EU919428.1 Methanobrevibacter sp. str. WBY1 prokMSA_id:553096 FJ919258.1 mechanism methanogenesis rumen clone M9 prokMSA_id:558652 FJ919265.1 mechanism methanogenesis rumen clone M16 prokMSA_id:563030 FJ938093.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 17 prokMSA_id:568954 FJ919255.1 mechanism methanogenesis rumen clone M6 prokMSA_id:569703 FJ919263.1 mechanism methanogenesis rumen clone M14 prokMSA_id:571691 FJ938086.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 10 prokMSA_id:572636 FJ938098.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 22 prokMSA_id:573765 FJ919278.1 mechanism methanogenesis rumen clone M29 prokMSA_id:575783 FJ938092.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 16 prokMSA_id:576203 EU574623.1 Long-term monensin supplementation does not significantly affect quantity or methanogens lactating dairy cow rumen clone UG3322.1 prokMSA_id:581949 FJ938088.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 12 prokMSA_id:583981 FJ938101.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 25 prokMSA_id:586627 FJ938080.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 4 prokMSA_id:588509 FJ938110.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 34 prokMSA_id:589463 FJ938103.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 27 prokMSA_id:590392 FJ938085.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 9 prokMSA_id:594159 FJ938107.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 31 1.3.4.1.2.3.2 s__Methanobrevibacter arboriphilus 6 seqs 1.3.4.1.2.3.2.127 OTU 6 seqs prokMSA_id:24414 AB065294.1 Methanobrevibacter arboriphilus str. SA prokMSA_id:95453 AY196665.1 Methanobrevibacter arboriphilus str. DH-1 prokMSA_id:95714 AY196664.1 Methanobrevibacter arboriphilus str. DC prokMSA_id:98500 AY196662.1 Methanobrevibacter arboriphilus str. A2 prokMSA_id:215326 EF376991.1 Microbial methanethiol-degrading anaerobic bioreactor elevated pH clone VII-D10 prokMSA_id:547463 FJ533154.1 Methanobrevibacter arboriphilus str. SH4 1.3.4.1.2.3.3 s__Methanobrevibacter smithii 15 seqs 1.3.4.1.2.3.3.128 OTU 15 seqs prokMSA_id:77 U55233.1 Methanobrevibacter smithii str. PS prokMSA_id:122 U55234.1 Methanobrevibacter smithii str. ALI prokMSA_id:123 U55235.1 Methanobrevibacter smithii str. B181; DSM 11975 prokMSA_id:96148 AY196667.1 Methanobrevibacter smithii str. ALI- prokMSA_id:98608 AY196668.1 Methanobrevibacter smithii str. B181 prokMSA_id:98872 AY196669.1 Methanobrevibacter smithii str. PS prokMSA_id:165497 DQ123880.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.10 prokMSA_id:227785 CP000678.1 Methanobrevibacter smithii 35061 str. ATCC 35061; PS; DSMZ 861 prokMSA_id:227786 CP000678.1 Methanobrevibacter smithii 35061 str. ATCC 35061; PS; DSMZ 861 prokMSA_id:229770 NC_009515.1 Methanobrevibacter smithii 35061 str. ATCC 35061; PS; DSMZ 861 prokMSA_id:229771 NC_009515.1 Methanobrevibacter smithii 35061 str. ATCC 35061; PS; DSMZ 861 prokMSA_id:470690 NZ_ABYW01000015.1 Methanobrevibacter smithii str. DSM 2375 prokMSA_id:484322 NZ_ABYV02000002.1 Methanobrevibacter smithii str. DSM 2374 prokMSA_id:517744 ABYV02000002.1 Methanobrevibacter smithii str. DSM 2374 prokMSA_id:557871 EU574626.1 Long-term monensin supplementation does not significantly affect quantity or methanogens lactating dairy cow rumen clone UG3349.4 1.3.4.1.2.4 g__Methanosphaera 48 seqs 1.3.4.1.2.4.1 Unclassified 38 seqs 1.3.4.1.2.4.1.129 OTU 38 seqs prokMSA_id:102979 AY351438.1 rumen fluid sheep grazing on forage clone CSIRO1.05 prokMSA_id:104035 AY351470.1 rumen fluid sheep fed grain-based diet clone CSIRO2.04 prokMSA_id:150973 DQ402032.1 methanogens goat rumen clone 24 prokMSA_id:151256 DQ402024.1 methanogens goat rumen clone 16 prokMSA_id:151343 DQ402019.1 methanogens goat rumen clone 11 prokMSA_id:151752 DQ391278.1 methanogens goat rumen clone 1 prokMSA_id:152981 DQ402016.1 methanogens goat rumen clone 8 prokMSA_id:153647 DQ402034.1 methanogens goat rumen clone 26 prokMSA_id:153917 DQ402012.1 methanogens goat rumen clone 4 prokMSA_id:155175 DQ402015.1 methanogens goat rumen clone 7 prokMSA_id:155634 DQ402011.1 methanogens goat rumen clone 3 prokMSA_id:155869 DQ402027.1 methanogens goat rumen clone 19 prokMSA_id:171018 DQ123883.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.13 prokMSA_id:176222 EF055526.1 methanogens rumen Jinnan cattle clone LGMJN37 prokMSA_id:186546 EF055527.1 methanogens rumen Jinnan cattle clone LGMJN38 prokMSA_id:192733 EF055524.1 methanogens rumen Jinnan cattle clone LGMJN35 prokMSA_id:195886 EF157718.1 methanogens primers rumen Jinnan cattle clone JNC8 prokMSA_id:223863 EF467852.1 gastrointestinal Archaea intestine clone 2 prokMSA_id:232356 EF584765.1 Archaea rumen goat clone 9 prokMSA_id:234409 EF584764.1 Archaea rumen goat clone 8 prokMSA_id:310429 EU547219.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-22 prokMSA_id:312333 EU161642.1 Rumen methanogens lactating dairy cattle Ontario Canada rumen clone UG3241.12 prokMSA_id:323003 EU547218.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-21 prokMSA_id:325696 EU547213.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-09 prokMSA_id:327904 EU547211.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-04 prokMSA_id:329931 EU547224.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-32 prokMSA_id:332058 EU547230.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-42 prokMSA_id:336166 EU547231.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-43 prokMSA_id:340381 EU547227.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-36 prokMSA_id:342852 EU547217.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-15 prokMSA_id:349886 EU547229.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-39 prokMSA_id:353258 EU547233.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-51 prokMSA_id:355018 EU547216.1 Rumen-like methanogens identified crop folivorous South American bird hoatzin methanogenic clone HZ-13 prokMSA_id:541748 AB541674.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_36 prokMSA_id:565174 AB541810.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_48 prokMSA_id:577471 AB541675.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_37 prokMSA_id:583058 AB541808.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_46 prokMSA_id:589886 AB541809.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_47 1.3.4.1.2.4.2 s__Methanosphaera stadtmanae 10 seqs 1.3.4.1.2.4.2.130 OTU 10 seqs prokMSA_id:57 M59139.1 Methanosphaera stadtmaniae prokMSA_id:97063 AY196684.1 Methanosphaera stadtmanae DSM 3091 str. MCB-3 prokMSA_id:150294 CP000102.1 Methanosphaera stadtmanae str. DSM 3091 prokMSA_id:150296 CP000102.1 Methanosphaera stadtmanae str. DSM 3091 prokMSA_id:150300 CP000102.1 Methanosphaera stadtmanae str. DSM 3091 prokMSA_id:150307 CP000102.1 Methanosphaera stadtmanae str. DSM 3091 prokMSA_id:150461 NC_007681.1 Methanosphaera stadtmanae str. DSM 3091 prokMSA_id:150467 NC_007681.1 Methanosphaera stadtmanae str. DSM 3091 prokMSA_id:150471 NC_007681.1 Methanosphaera stadtmanae str. DSM 3091 prokMSA_id:150477 NC_007681.1 Methanosphaera stadtmanae str. DSM 3091 1.3.4.1.2.5 g__Methanothermobacter 42 seqs 1.3.4.1.2.5.1 s__Methanothermobacter thermautotrophicus 42 seqs 1.3.4.1.2.5.1.131 OTU 42 seqs prokMSA_id:216 X99048.1 Methanothermobacter thermophilus str. M VKM B-1786 DSM 6529 prokMSA_id:219 X68716.1 Methanobacterium thermoautotrophicum prokMSA_id:221 X68715.1 Methanobacterium thermoautotrophicum prokMSA_id:222 X68717.1 Methanobacterium thermoautotrophicum prokMSA_id:223 X15364.1 Methanothermobacter thermautotrophicus str. Marburg prokMSA_id:225 X99047.1 Methanothermobacter thermoflexus str. IDZ VKM B-1963 DSM 7268 prokMSA_id:226 X68714.1 Methanobacterium thermoautotrophicum prokMSA_id:227 Z37156.1 Methanothermobacter thermautotrophicus str. ZH3 prokMSA_id:233 AB020530.1 Methanothermobacter thermautotrophicus str. KHT-2 prokMSA_id:234 X68711.1 Methanobacterium thermoautotrophicum prokMSA_id:235 X68719.1 Methanobacterium thermoautotrophicum prokMSA_id:236 X99046.1 Methanothermobacter defluvii str. ADZ VKM B-1962 DSM 7466 prokMSA_id:239 X68720.1 Methanobacterium thermoautotrophicum prokMSA_id:240 X68718.1 Methanobacterium thermoautotrophicum prokMSA_id:241 X68712.1 Methanobacterium thermoautotrophicum prokMSA_id:251 X68713.1 Methanobacterium thermoautotrophicum prokMSA_id:49751 NC_000916.1 Methanothermobacter thermautotrophicus str. H prokMSA_id:67146 AB084241.1 solid waste landfill clone LCB prokMSA_id:81334 AB104858.1 Methanothermobacter wolfeii str. DSM 2970 prokMSA_id:95598 AY196660.1 Methanothermobacter thermautotrophicus str. H prokMSA_id:98338 AY196661.1 Methanothermobacter thermautotrophicus str. GC-1 prokMSA_id:129196 NC_000916.1 Methanothermobacter thermautotrophicus str. H prokMSA_id:135338 AY526513.1 Microbial thermophilic anaerobic sludge methanol-fed lab scale bioreactor clone L4 prokMSA_id:135347 AY526511.1 Microbial thermophilic anaerobic sludge methanol-fed lab scale bioreactor clone L1 prokMSA_id:135348 AY526512.1 Microbial thermophilic anaerobic sludge methanol-fed lab scale bioreactor clone L2 prokMSA_id:135363 AY526518.1 Microbial thermophilic anaerobic sludge methanol-fed lab scale bioreactor clone O9 prokMSA_id:145369 AE000666.1 Methanothermobacter thermautotrophicus str. H prokMSA_id:145370 AE000666.1 Methanothermobacter thermautotrophicus str. H prokMSA_id:162275 DQ657904.1 Methanothermobacter wolfeii str. KZ24a prokMSA_id:164107 DQ649328.2 Methanothermobacter thermautotrophicus str. Oil prokMSA_id:166509 DQ683581.1 Methanothermobacter sp. str. THUT3 prokMSA_id:167881 DQ657903.1 Methanothermobacter thermautotrophicus str. KZ3-1 prokMSA_id:185490 EF198051.1 Microbial structures mesophilic and methanogenic consortia anaerobic thermophilic phenol-degrading enrichment clone TP120 prokMSA_id:191495 EF100758.1 Methanothermobacter thermautotrophicus str. JZTM prokMSA_id:197797 DQ867043.1 Microbial and methanogenic potential temperature water Japan natural gas field clone NAK2-a2 prokMSA_id:198762 DQ867050.1 Microbial and methanogenic potential temperature water Japan natural gas field clone NAK1-a2 prokMSA_id:369183 FJ418154.1 Methanothermobacter sp. str. RY3 prokMSA_id:525425 AB539928.1 Evidence syntrophic acetate oxidation coupled hydrogenotrophic methanogenesis -temperature petroleum reservoir Yabase oil field clone YAB3A18 prokMSA_id:529647 AB539930.1 Evidence syntrophic acetate oxidation coupled hydrogenotrophic methanogenesis -temperature petroleum reservoir Yabase oil field clone YAB2A2 prokMSA_id:558242 AB539926.1 Evidence syntrophic acetate oxidation coupled hydrogenotrophic methanogenesis -temperature petroleum reservoir Yabase oil field clone AR80A55 prokMSA_id:570924 NR_028248.1 Methanothermobacter defluvii str. ADZ; DSM 7466 prokMSA_id:575849 NR_028249.1 Methanothermobacter thermoflexus str. IDZ; VKM B-1963; DSM 7268 1.3.4.1.3 f__MSBL1 13 seqs 1.3.4.1.3.1 g__DL1A-100 7 seqs 1.3.4.1.3.1.132 OTU 7 seqs prokMSA_id:129560 AY226377.3 from the brine water of Urania, Mediterranean Sea clone UBBA-104 prokMSA_id:129587 AY226366.3 from the brine water of Bannock, Mediterranean Sea clone BBBA-8 prokMSA_id:131094 AY226367.3 from the brine water of Discovery, Mediterranean Sea clone DBBA-136 prokMSA_id:131861 AY226353.3 from the brine water of L'Atalante, Mediterranean Sea clone ABBA-76 prokMSA_id:132875 AY226347.3 from the brine water of L'Atalante, Mediterranean Sea clone ABBA-35 prokMSA_id:136054 AY164305.3 and archaeal 4 deep-sea basins hypersaline anoxic basin; brine interface Discovery Mediterranean Sea clone DLIA-100 prokMSA_id:544697 FN391284.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone SFH1C091 1.3.4.1.3.2 g__SAGMEG-1 6 seqs 1.3.4.1.3.2.133 OTU 6 seqs prokMSA_id:140100 AB237744.1 microorganisms deep subsurface groundwater sedimentary rock milieu clone HDBW-WA11 prokMSA_id:140297 AB237742.1 microorganisms deep subsurface groundwater sedimentary rock milieu clone HDBW-WA09 prokMSA_id:180855 DQ841217.1 Microbial deep subsurface gas- water Minami-kanto Japan natural gas field clone MOB4-11 prokMSA_id:193825 DQ841235.1 Microbial deep subsurface gas- water Minami-kanto Japan natural gas field clone MOB7-13 prokMSA_id:566419 FJ649518.1 Prokaryotic layer S1 Amsterdam Mud Volcano sapropel sediment East Mediterranean Sea clone AMSMV-S1-A20 prokMSA_id:573600 FJ902718.1 phreatic limestone sinkholes northeastern Mexico biomat 30m deep cenote La Palita clone LP30MA64 1.3.4.1.4 f__pMC1 31 seqs 1.3.4.1.4.1 Unclassified 2 seqs 1.3.4.1.4.1.134 OTU 2 seqs prokMSA_id:253993 AB329806.1 Microbial southern Mariana trough hydrothermal deposits clone YS18As05 prokMSA_id:589892 GU137351.1 Archaeal arsenic-rich shal-sea hydrothermal sediments vent 4 transect B sediment 0-10 cm depth 7.5m source clone PNG_TB_4B7.5H1_A148 1.3.4.1.4.2 g__pMC1A4 29 seqs 1.3.4.1.4.2.135 OTU 29 seqs prokMSA_id:245 AF119124.1 deep-sea sediment clone CRA13-11cm prokMSA_id:248 AF119140.1 deep-sea sediment clone APA7-17cm prokMSA_id:249 AB019754.1 hydrothermal vent clone pMC1A4 prokMSA_id:101987 AY592526.1 deep-sea mud volcano clone Napoli-3A-19; BC07-3A-19 prokMSA_id:119938 AB213103.1 hydrothermal fluid clone Papm3A53 prokMSA_id:120421 AB213087.1 hydrothermal fluid clone Papm3A05 prokMSA_id:124491 AB213060.1 hydrothermal fluid clone Fapm1aA24 prokMSA_id:124675 AB213097.1 hydrothermal fluid clone Papm3A41 prokMSA_id:124738 AB213067.1 hydrothermal fluid clone FnvA05 prokMSA_id:125247 AB213088.1 hydrothermal fluid clone Papm3A10 prokMSA_id:188272 AB260057.1 Microbial black exposed hot ridge flank crustal fluids Black rust formation on borehole observatory CORK 1026B clone CORK.A24 prokMSA_id:216303 AB293220.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Pbsc1A41 prokMSA_id:235659 AB329767.1 Microbial southern Mariana trough hydrothermal deposits clone YS16Ac42 prokMSA_id:239879 AB329771.1 Microbial southern Mariana trough hydrothermal deposits clone YS16Ac52 prokMSA_id:240993 AB329799.1 Microbial southern Mariana trough hydrothermal deposits clone YS16As57 prokMSA_id:241739 AB329816.1 Microbial southern Mariana trough hydrothermal deposits clone YS18As53 prokMSA_id:242069 AB329774.1 Microbial southern Mariana trough hydrothermal deposits clone YS16Ac56 prokMSA_id:244899 AB329785.1 Microbial southern Mariana trough hydrothermal deposits clone YS16As08 prokMSA_id:245107 AB329783.1 Microbial southern Mariana trough hydrothermal deposits clone YS16As05 prokMSA_id:245708 AB329756.1 Microbial southern Mariana trough hydrothermal deposits clone YS16Ac06 prokMSA_id:246862 AB329760.1 Microbial southern Mariana trough hydrothermal deposits clone YS16Ac27 prokMSA_id:250228 AB329808.1 Microbial southern Mariana trough hydrothermal deposits clone YS18As16 prokMSA_id:252384 AB329779.1 Microbial southern Mariana trough hydrothermal deposits clone YS16Ac80 prokMSA_id:252537 AB329788.1 Microbial southern Mariana trough hydrothermal deposits clone YS16As13 prokMSA_id:253120 AB329787.1 Microbial southern Mariana trough hydrothermal deposits clone YS16As11 prokMSA_id:253783 AB329812.1 Microbial southern Mariana trough hydrothermal deposits clone YS18As36 prokMSA_id:255692 AB329822.1 Microbial southern Mariana trough hydrothermal deposits clone YS18As79 prokMSA_id:265152 AB424706.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Fhm5A25 prokMSA_id:543071 EU420681.1 Archaeal and Kao-Mei Wetland clone KM07-Ba-4 1.3.4.1.5 f__WSA2 417 seqs 1.3.4.1.5.136 OTU 417 seqs prokMSA_id:27098 AF424769.1 municipal wastewater sludge clone 39-2 prokMSA_id:32110 AF424763.1 municipal wastewater sludge clone 69-1 prokMSA_id:39716 AF419656.1 Guaymas Basin hydrothermal sediment clone AT_R040 prokMSA_id:51118 AF424764.1 municipal wastewater sludge clone 46-1 prokMSA_id:52425 AF424765.1 municipal wastewater sludge clone 44A-1 prokMSA_id:62886 AB077223.1 oil-contaminated groundwater clone KuA13 prokMSA_id:100529 AJ576239.1 landfill leachate clone GZK72 prokMSA_id:105401 AF419651.1 Guaymas Basin hydrothermal sediment clone AT_R012 prokMSA_id:137541 AY835427.2 hydrothermal sediment clone 4E09 prokMSA_id:138474 AY835426.2 Methanogen Evidenced Methyl Coenzyme M Reductase (mcrA) Genes Hydrothermal Sediments Guaymas Basin hydrothermal sediment clone 4B09 prokMSA_id:138592 AY835425.2 Methanogen Evidenced Methyl Coenzyme M Reductase (mcrA) Genes Hydrothermal Sediments Guaymas Basin hydrothermal sediment clone 4D08 prokMSA_id:150732 CT573706.1 Evry municipal wastewater treatment plant clone 058E02_A_SD_P93 prokMSA_id:150830 CT573643.1 Evry municipal wastewater treatment plant clone 059D02_A_SD_P93 prokMSA_id:150843 CT573538.1 Evry municipal wastewater treatment plant clone 015D09_A_SD_P15 prokMSA_id:150859 CT573702.1 Evry municipal wastewater treatment plant clone 058E06_A_SD_P93 prokMSA_id:150868 CT573679.1 Evry municipal wastewater treatment plant clone 058G12_A_SD_P93 prokMSA_id:150901 CT573743.1 Evry municipal wastewater treatment plant clone 058A01_A_SD_P93 prokMSA_id:150913 CT573518.1 Evry municipal wastewater treatment plant clone 015G08_A_SD_P15 prokMSA_id:150924 CT573660.1 Evry municipal wastewater treatment plant clone 059B03_A_SD_P93 prokMSA_id:150950 CT573623.1 Evry municipal wastewater treatment plant clone 059F08_A_SD_P93 prokMSA_id:150966 CT573672.1 Evry municipal wastewater treatment plant clone 058H09_A_SD_P93 prokMSA_id:151025 CT573683.1 Evry municipal wastewater treatment plant clone 058G07_A_SD_P93 prokMSA_id:151041 CT573663.1 Evry municipal wastewater treatment plant clone 059A09_A_SD_P93 prokMSA_id:151065 CT573726.1 Evry municipal wastewater treatment plant clone 058C01_A_SD_P93 prokMSA_id:151177 CT573649.1 Evry municipal wastewater treatment plant clone 059C07_A_SD_P93 prokMSA_id:151209 CT573516.1 Evry municipal wastewater treatment plant clone 015G12_A_SD_P15 prokMSA_id:151329 CT573647.1 Evry municipal wastewater treatment plant clone 059C09_A_SD_P93 prokMSA_id:151403 CT573619.1 Evry municipal wastewater treatment plant clone 059G03_A_SD_P93 prokMSA_id:151418 CT573695.1 Evry municipal wastewater treatment plant clone 058F02_A_SD_P93 prokMSA_id:151456 CT573646.1 Evry municipal wastewater treatment plant clone 059C10_A_SD_P93 prokMSA_id:151479 CT573526.1 Evry municipal wastewater treatment plant clone 015F04_A_SD_P15 prokMSA_id:151498 CT573711.1 Evry municipal wastewater treatment plant clone 058D09_A_SD_P93 prokMSA_id:151537 CT573611.1 Evry municipal wastewater treatment plant clone 059H03_A_SD_P93 prokMSA_id:151565 CT573692.1 Evry municipal wastewater treatment plant clone 058F07_A_SD_P93 prokMSA_id:151601 CT573627.1 Evry municipal wastewater treatment plant clone 059F03_A_SD_P93 prokMSA_id:151609 CT573537.1 Evry municipal wastewater treatment plant clone 015D10_A_SD_P15 prokMSA_id:151639 CT573547.1 Evry municipal wastewater treatment plant clone 015C08_A_SD_P15 prokMSA_id:151660 CT573637.1 Evry municipal wastewater treatment plant clone 059E02_A_SD_P93 prokMSA_id:151748 CT573573.1 Evry municipal wastewater treatment plant clone 014G09_A_SD_P15 prokMSA_id:151805 CT573680.1 Evry municipal wastewater treatment plant clone 058G11_A_SD_P93 prokMSA_id:151813 CT573633.1 Evry municipal wastewater treatment plant clone 059E07_A_SD_P93 prokMSA_id:151927 CT573682.1 Evry municipal wastewater treatment plant clone 058G08_A_SD_P93 prokMSA_id:151934 CT573666.1 Evry municipal wastewater treatment plant clone 059A05_A_SD_P93 prokMSA_id:151972 CT573686.1 Evry municipal wastewater treatment plant clone 058F12_A_SD_P93 prokMSA_id:152069 CT573735.1 Evry municipal wastewater treatment plant clone 058A11_A_SD_P93 prokMSA_id:152121 CT573598.1 Evry municipal wastewater treatment plant clone 014B12_A_SD_P15 prokMSA_id:152238 CT573687.1 Evry municipal wastewater treatment plant clone 058F11_A_SD_P93 prokMSA_id:152260 CT573641.1 Evry municipal wastewater treatment plant clone 059D08_A_SD_P93 prokMSA_id:152275 CT573650.1 Evry municipal wastewater treatment plant clone 059C05_A_SD_P93 prokMSA_id:152288 CT573528.1 Evry municipal wastewater treatment plant clone 015F01_A_SD_P15 prokMSA_id:152319 CT573645.1 Evry municipal wastewater treatment plant clone 059C11_A_SD_P93 prokMSA_id:152378 CT573624.1 Evry municipal wastewater treatment plant clone 059F06_A_SD_P93 prokMSA_id:152507 CT573642.1 Evry municipal wastewater treatment plant clone 059D03_A_SD_P93 prokMSA_id:152552 CT573673.1 Evry municipal wastewater treatment plant clone 058H08_A_SD_P93 prokMSA_id:152607 CT573733.1 Evry municipal wastewater treatment plant clone 058B05_A_SD_P93 prokMSA_id:152631 CT573674.1 Evry municipal wastewater treatment plant clone 058H07_A_SD_P93 prokMSA_id:152633 CT573613.1 Evry municipal wastewater treatment plant clone 059H01_A_SD_P93 prokMSA_id:152749 CT573615.1 Evry municipal wastewater treatment plant clone 059G08_A_SD_P93 prokMSA_id:152847 CT573629.1 Evry municipal wastewater treatment plant clone 059F01_A_SD_P93 prokMSA_id:152901 CT573628.1 Evry municipal wastewater treatment plant clone 059F02_A_SD_P93 prokMSA_id:153021 CT573600.1 Evry municipal wastewater treatment plant clone 014B09_A_SD_P15 prokMSA_id:153080 CT573699.1 Evry municipal wastewater treatment plant clone 058E09_A_SD_P93 prokMSA_id:153139 CT573688.1 Evry municipal wastewater treatment plant clone 058F10_A_SD_P93 prokMSA_id:153198 CT573684.1 Evry municipal wastewater treatment plant clone 058G04_A_SD_P93 prokMSA_id:153242 CT573621.1 Evry municipal wastewater treatment plant clone 059G01_A_SD_P93 prokMSA_id:153250 CT573693.1 Evry municipal wastewater treatment plant clone 058F05_A_SD_P93 prokMSA_id:153258 CT573671.1 Evry municipal wastewater treatment plant clone 058H10_A_SD_P93 prokMSA_id:153343 CT573618.1 Evry municipal wastewater treatment plant clone 059G05_A_SD_P93 prokMSA_id:153352 CT573659.1 Evry municipal wastewater treatment plant clone 059B06_A_SD_P93 prokMSA_id:153469 CT573716.1 Evry municipal wastewater treatment plant clone 058D01_A_SD_P93 prokMSA_id:153476 CT573577.1 Evry municipal wastewater treatment plant clone 014G02_A_SD_P15 prokMSA_id:153677 CT573657.1 Evry municipal wastewater treatment plant clone 059B08_A_SD_P93 prokMSA_id:153681 CT573713.1 Evry municipal wastewater treatment plant clone 058D07_A_SD_P93 prokMSA_id:153765 CT573604.1 Evry municipal wastewater treatment plant clone 014A12_A_SD_P15 prokMSA_id:153774 CT573722.1 Evry municipal wastewater treatment plant clone 058C05_A_SD_P93 prokMSA_id:153830 CT573635.1 Evry municipal wastewater treatment plant clone 059E04_A_SD_P93 prokMSA_id:153890 CT573724.1 Evry municipal wastewater treatment plant clone 058C03_A_SD_P93 prokMSA_id:153893 CT573655.1 Evry municipal wastewater treatment plant clone 059B10_A_SD_P93 prokMSA_id:153939 CT573658.1 Evry municipal wastewater treatment plant clone 059B07_A_SD_P93 prokMSA_id:153991 CT573712.1 Evry municipal wastewater treatment plant clone 058D08_A_SD_P93 prokMSA_id:154069 CT573741.1 Evry municipal wastewater treatment plant clone 058A04_A_SD_P93 prokMSA_id:154075 CT573707.1 Evry municipal wastewater treatment plant clone 058E01_A_SD_P93 prokMSA_id:154103 CT573644.1 Evry municipal wastewater treatment plant clone 059D01_A_SD_P93 prokMSA_id:154160 CT573620.1 Evry municipal wastewater treatment plant clone 059G02_A_SD_P93 prokMSA_id:154225 CT573715.1 Evry municipal wastewater treatment plant clone 058D03_A_SD_P93 prokMSA_id:154259 CT573727.1 Evry municipal wastewater treatment plant clone 058B12_A_SD_P93 prokMSA_id:154311 CT573714.1 Evry municipal wastewater treatment plant clone 058D04_A_SD_P93 prokMSA_id:154561 CT573731.1 Evry municipal wastewater treatment plant clone 058B07_A_SD_P93 prokMSA_id:154575 CT573590.1 Evry municipal wastewater treatment plant clone 014D11_A_SD_P15 prokMSA_id:154759 CT573636.1 Evry municipal wastewater treatment plant clone 059E03_A_SD_P93 prokMSA_id:154807 CT573725.1 Evry municipal wastewater treatment plant clone 058C02_A_SD_P93 prokMSA_id:154920 CT573580.1 Evry municipal wastewater treatment plant clone 014F09_A_SD_P15 prokMSA_id:154928 CT573696.1 Evry municipal wastewater treatment plant clone 058F01_A_SD_P93 prokMSA_id:155005 CT573690.1 Evry municipal wastewater treatment plant clone 058F08_A_SD_P93 prokMSA_id:155006 CT573597.1 Evry municipal wastewater treatment plant clone 014C06_A_SD_P15 prokMSA_id:155024 CT573610.1 Evry municipal wastewater treatment plant clone 059H04_A_SD_P93 prokMSA_id:155152 CT573739.1 Evry municipal wastewater treatment plant clone 058A07_A_SD_P93 prokMSA_id:155153 CT573632.1 Evry municipal wastewater treatment plant clone 059E08_A_SD_P93 prokMSA_id:155184 CT573736.1 Evry municipal wastewater treatment plant clone 058A10_A_SD_P93 prokMSA_id:155228 CT573653.1 Evry municipal wastewater treatment plant clone 059C01_A_SD_P93 prokMSA_id:155363 CT573681.1 Evry municipal wastewater treatment plant clone 058G09_A_SD_P93 prokMSA_id:155436 CT573694.1 Evry municipal wastewater treatment plant clone 058F03_A_SD_P93 prokMSA_id:155451 CT573738.1 Evry municipal wastewater treatment plant clone 058A08_A_SD_P93 prokMSA_id:155464 CT573614.1 Evry municipal wastewater treatment plant clone 059G09_A_SD_P93 prokMSA_id:155643 CT573630.1 Evry municipal wastewater treatment plant clone 059E10_A_SD_P93 prokMSA_id:155687 CT573701.1 Evry municipal wastewater treatment plant clone 058E07_A_SD_P93 prokMSA_id:155712 CT573656.1 Evry municipal wastewater treatment plant clone 059B09_A_SD_P93 prokMSA_id:155715 CT573551.1 Evry municipal wastewater treatment plant clone 015C03_A_SD_P15 prokMSA_id:155735 CT573558.1 Evry municipal wastewater treatment plant clone 015B05_A_SD_P15 prokMSA_id:155775 CT573664.1 Evry municipal wastewater treatment plant clone 059A08_A_SD_P93 prokMSA_id:155845 CT573622.1 Evry municipal wastewater treatment plant clone 059F10_A_SD_P93 prokMSA_id:155848 CT573561.1 Evry municipal wastewater treatment plant clone 015A11_A_SD_P15 prokMSA_id:155860 CT573740.1 Evry municipal wastewater treatment plant clone 058A06_A_SD_P93 prokMSA_id:155924 CT573602.1 Evry municipal wastewater treatment plant clone 014B04_A_SD_P15 prokMSA_id:155952 CT573730.1 Evry municipal wastewater treatment plant clone 058B08_A_SD_P93 prokMSA_id:156018 CT573729.1 Evry municipal wastewater treatment plant clone 058B09_A_SD_P93 prokMSA_id:156082 CT573512.1 Evry municipal wastewater treatment plant clone 015H04_A_SD_P15 prokMSA_id:156102 CT573678.1 Evry municipal wastewater treatment plant clone 058H01_A_SD_P93 prokMSA_id:156196 CT573700.1 Evry municipal wastewater treatment plant clone 058E08_A_SD_P93 prokMSA_id:156313 CT573720.1 Evry municipal wastewater treatment plant clone 058C08_A_SD_P93 prokMSA_id:156320 CT573609.1 Evry municipal wastewater treatment plant clone 059H07_A_SD_P93 prokMSA_id:156322 CT573523.1 Evry municipal wastewater treatment plant clone 015F11_A_SD_P15 prokMSA_id:156334 CT573732.1 Evry municipal wastewater treatment plant clone 058B06_A_SD_P93 prokMSA_id:156361 CT573559.1 Evry municipal wastewater treatment plant clone 015B03_A_SD_P15 prokMSA_id:156404 CT573689.1 Evry municipal wastewater treatment plant clone 058F09_A_SD_P93 prokMSA_id:156511 CT573717.1 Evry municipal wastewater treatment plant clone 058C12_A_SD_P93 prokMSA_id:156560 CT573654.1 Evry municipal wastewater treatment plant clone 059B12_A_SD_P93 prokMSA_id:163307 AB266909.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone YkA78fl prokMSA_id:204914 EF376988.1 Microbial methanethiol-degrading anaerobic bioreactor elevated pH clone VII-D1 prokMSA_id:267686 EU591672.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MCSArc_D8 prokMSA_id:284297 EU662673.1 Microbial -temperature sludges sludge manure pit clone P41 prokMSA_id:285652 EU662685.1 Microbial -temperature sludges sludge manure pit clone S38 prokMSA_id:338045 FJ167435.1 microbiology granular sludge under autotrophic mixotrophic and heterotrophic denitrification conditions denitrifying bioreactor clone R2A-3 prokMSA_id:341192 EU910627.1 Eukaryal and Archaeal Middle Island sinkhole (Lake Huron USA) sediment clone F3 prokMSA_id:433983 FJ971744.1 microbial autrotrophic denitrification granular sludge clone E-A3 prokMSA_id:513727 FJ705127.1 Study prokaryotic selected niches Western Ghats India WCS sediment clone ACWCSP1D6 prokMSA_id:519852 FJ712390.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-25-A37 prokMSA_id:532650 CU917459.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532706 CU917171.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532753 CU917366.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532805 CU916806.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532933 CU917107.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532945 CU917435.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532977 CU916958.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533218 CU917278.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533264 CU915925.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533305 CU917385.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533313 CU916782.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533390 CU917127.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533474 CU916848.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533476 CU917348.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533532 CU915891.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533719 CU916823.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534140 CU916748.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534173 CU916998.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534229 CU917230.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534269 CU917316.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534631 CU917238.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535467 CU916824.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535558 CU917464.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535622 CU916098.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535626 CU916949.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535681 CU917086.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535778 CU916973.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536224 CU917103.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536465 CU917264.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536643 CU916864.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536790 CU917117.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536941 CU916905.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537146 CU917379.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537250 CU916988.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537339 CU917330.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537570 CU917062.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537583 CU915856.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537726 CU916135.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537787 CU917322.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537806 CU917188.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537877 CU915966.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537917 CU917458.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537962 CU915997.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538353 CU916874.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539015 CU916802.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539153 CU917374.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539323 CU917211.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539684 CU916893.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539857 CU916791.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539936 CU916815.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539949 CU915984.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539971 CU916775.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540035 CU917415.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540343 CU916088.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540475 CU917194.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540641 CU916744.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540785 CU915840.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540818 CU917242.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540827 CU916959.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540836 CU916743.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540882 CU915912.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540947 CU916853.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541083 CU917468.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541126 CU917182.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541229 CU917079.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541402 CU915871.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541713 CU917465.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541826 CU916129.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542033 CU916269.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542186 CU915900.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542234 CU917441.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542261 CU917149.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542739 CU916896.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542932 CU916730.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543003 CU917093.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543276 CU916995.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543304 CU917250.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543411 CU917317.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543534 CU917122.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543721 CU916778.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543885 CU916904.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544043 CU916796.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544149 CU917196.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544193 CU917125.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544416 CU916858.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544606 CU917266.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544665 CU917048.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545183 CU916950.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545406 CU915834.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545447 CU916830.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545704 CU915964.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545887 CU917063.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546207 CU916164.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546224 CU917112.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546363 CU917097.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546490 CU916018.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546535 CU917234.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546827 CU917025.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546866 CU916080.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547182 CU916968.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547272 CU916072.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547415 CU916037.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547842 CU916792.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547989 CU917350.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548048 CU917007.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548069 CU916073.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548229 CU915886.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548232 CU916779.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548578 CU916901.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548598 CU917449.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548684 CU917137.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548710 CU917180.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548743 CU917059.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548825 CU915930.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549019 CU917239.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549131 CU917074.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549179 CU916082.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549579 CU917291.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549710 CU917381.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549856 CU916934.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549872 CU917422.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549930 CU916941.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550050 CU916999.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550071 CU915857.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550084 CU917132.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550852 CU916728.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550912 CU915830.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:551120 CU917377.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:551326 CU917159.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:551986 CU915896.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552089 CU917303.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552291 CU916828.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552324 CU917111.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552551 CU917064.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552639 CU915950.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553263 CU917151.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553320 CU917134.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553356 CU915967.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553369 CU917386.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553420 CU917255.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553446 CU916049.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553514 CU917446.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553579 CU915976.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553916 CU917382.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554027 CU917168.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554215 CU916000.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554489 CU917150.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554867 CU917126.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554901 CU916938.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555159 CU917013.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555218 CU917261.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555320 CU915939.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555408 CU917008.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555436 CU916991.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555712 CU917178.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555941 CU916163.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556335 CU917088.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556490 CU917244.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556646 CU916977.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556726 CU915841.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556905 CU917392.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557360 CU917005.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557377 CU917282.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557511 CU917009.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557579 CU917359.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557716 CU917309.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557761 CU917070.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558065 CU916021.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558073 CU916910.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558176 CU917306.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558431 CU916074.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558464 CU917397.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558547 CU917300.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558670 CU917207.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558728 CU917148.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558840 CU917184.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558847 CU917185.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558946 CU916009.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558952 CU917431.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559002 CU916750.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559064 CU917138.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559112 CU917210.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559720 CU917249.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559839 CU916025.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559840 CU917444.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560123 CU915959.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560330 CU917223.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560370 CU915861.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560613 CU917284.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560680 CU917353.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:561132 CU915873.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:561486 CU916927.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:561628 CU916068.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:561964 CU917409.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562159 CU917339.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562303 CU916793.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562361 CU917154.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562600 CU917034.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562679 CU917323.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562844 CU917158.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562972 CU917199.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563018 CU917017.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563181 CU917443.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563183 CU917286.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563305 CU916873.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563381 CU917403.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563719 CU915975.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563746 CU917166.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:564054 CU916067.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:564221 CU915860.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:564303 CU917140.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:564490 CU917328.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:564538 CU916909.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:564824 CU916883.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:564833 CU916885.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:565079 CU917384.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:565137 CU915876.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:565353 CU916964.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:565551 CU916035.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:565713 CU915914.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:565849 CU917145.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:566172 CU916120.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:566442 CU915962.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:566445 CU916907.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:566481 CU916847.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:566624 CU916942.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:566880 CU917225.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:566884 CU917419.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567407 CU916839.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567479 CU917202.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567558 CU917052.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567601 CU917229.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567755 CU916945.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:568113 CU917277.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:568213 CU916053.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:568327 CU917181.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:568475 CU916159.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:568535 CU917338.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:568680 CU916153.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:569282 CU916170.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:570008 FN428818.1 Biomarker indicators anaerobic oxidizers diffusive methane fluxes brackish-marine sediments Aarhus Bay (Henry IV/04) clone Arch60 prokMSA_id:570287 CU916812.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:570462 CU916070.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:570658 CU916982.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:570793 CU916837.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:571325 CU917160.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:571366 CU917375.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:571655 CU917169.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:571892 CU917451.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:571959 CU916055.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:572271 CU916875.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:572276 CU916984.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:572465 CU917355.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573022 CU916987.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573130 CU917305.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573173 CU916986.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573292 CU915831.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573358 CU917297.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573486 CU917023.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573553 CU916127.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573611 CU917109.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573702 CU917170.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573933 CU917370.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574006 CU917212.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574047 CU917263.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574059 CU917011.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574070 CU916147.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574181 CU915832.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574223 CU917114.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574363 CU917187.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574367 CU917413.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574481 CU916840.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574610 CU917262.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574774 CU916797.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574915 CU917436.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575099 CU917315.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575701 CU917417.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575872 CU917094.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575951 CU917056.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:576149 CU916002.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone 1.3.5 c__Methanococci 101 seqs 1.3.5.1 o__Methanococcales 101 seqs 1.3.5.1.1 Unclassified 2 seqs 1.3.5.1.1.137 OTU 2 seqs prokMSA_id:135915 AB100884.1 Methanotorris formicicus str. Mc-S-70 prokMSA_id:552640 NR_028646.1 Methanotorris formicicus str. Mc-S-70; ATCC BAA-687 1.3.5.1.2 f__Methanocaldococcaceae 21 seqs 1.3.5.1.2.1 g__Methanocaldococcus 21 seqs 1.3.5.1.2.1.138 OTU 21 seqs prokMSA_id:16 AF056938.1 Methanocaldococcus fervens str. AG86; DSM4213 prokMSA_id:17 AF051404.1 Methanocaldococcus vulcanius str. M7 prokMSA_id:20 AF025822.1 Methanococcus infernus prokMSA_id:68330 AF356636.1 Guaymas Basin clone G26_C63 prokMSA_id:68331 AF356633.1 Guaymas Basin clone G26_C50 prokMSA_id:68332 AF356630.1 Guaymas Basin clone G26_C46 prokMSA_id:68333 AF356634.1 Guaymas Basin clone G26_C51 prokMSA_id:70924 AF356638.1 Guaymas Basin clone G26_C82 prokMSA_id:81740 AF547621.1 Methanocaldococcus indicus str. SL43 prokMSA_id:142640 NC_000909.1 Methanocaldococcus jannaschii str. DSM 2661 prokMSA_id:142642 NC_000909.1 Methanocaldococcus jannaschii str. DSM 2661 prokMSA_id:157276 AJ969469.1 Microbial black smoker s Mid Atlantic Ridge ecological implications rock fragments chimney deep sea hydrothermal vent field clone PICO pp37 Rainbow 109A prokMSA_id:157694 AJ969471.1 Microbial black smoker s Mid Atlantic Ridge ecological implications rock fragments chimney deep sea hydrothermal vent field clone PICO pp37 Rainbow 17A prokMSA_id:158960 AJ969474.1 Microbial black smoker s Mid Atlantic Ridge ecological implications rock fragments chimney deep sea hydrothermal vent field clone PICO pp37 Rainbow 38A prokMSA_id:179917 EF079968.1 hyperthermophilic methanogen FS406-22 prokMSA_id:255654 DQ925862.1 Microbes and Thermal Gradients Temperature Hydrothermal Chimneys hydrothermal vent chimneys Guaymas Basin clone 147A6 prokMSA_id:531981 CP001901.1 Methanocaldococcus sp. str. FS406-22 prokMSA_id:531983 CP001901.1 Methanocaldococcus sp. str. FS406-22 prokMSA_id:577619 NR_028701.1 Methanocaldococcus vulcanius str. M7; ATCC 700851 prokMSA_id:584600 FJ766848.1 Methanocaldococcus sp. str. KIN24-T80 prokMSA_id:589434 NR_028861.1 Methanocaldococcus indicus str. SL43; DSM 15027 1.3.5.1.3 f__Methanococcaceae 78 seqs 1.3.5.1.3.1 Unclassified 2 seqs 1.3.5.1.3.1.139 OTU 2 seqs prokMSA_id:556001 FN356378.1 Prokaryotic structure sulfate reducer activity -temperature reservoirs and without nitrate treatment oil production water clone Dan_Arch32 prokMSA_id:585847 FN356377.1 Prokaryotic structure sulfate reducer activity -temperature reservoirs and without nitrate treatment oil production water clone Dan_Arch65 1.3.5.1.3.2 g__Methanococcus 69 seqs 1.3.5.1.3.2.1 Unclassified 8 seqs 1.3.5.1.3.2.1.140 OTU 8 seqs prokMSA_id:36765 AF306670.1 Methanococcus sp. str. P2F9701a prokMSA_id:48249 AB057722.1 Methanothermococcus okinawensis str. IH1 prokMSA_id:69659 AF356632.1 Guaymas Basin clone G26_C49 prokMSA_id:69745 AF356629.1 Guaymas Basin clone G26_C45 prokMSA_id:73911 AF356628.1 Guaymas Basin clone G26_C5 prokMSA_id:236915 ABHB01000001.1 Methanococcus voltae str. A3 prokMSA_id:240377 NZ_ABHB01000001.1 Methanococcus voltae str. A3 prokMSA_id:538763 NR_028155.1 Methanothermococcus okinawensis str. IH1; JCM 11175 1.3.5.1.3.2.2 s__Methanococcus aeolicus 13 seqs 1.3.5.1.3.2.2.141 OTU 13 seqs prokMSA_id:137565 DQ136171.1 Methanococcus aeolicus str. PL-15/H prokMSA_id:157395 DQ195164.1 Methanococcus aeolicus str. Nankai-3 prokMSA_id:158904 DQ195165.1 Methanococcus aeolicus str. Nankai-2 prokMSA_id:219690 NZ_AAZL01000001.1 Methanococcus aeolicus str. Nankai-3 prokMSA_id:219691 NZ_AAZL01000001.1 Methanococcus aeolicus str. Nankai-3 prokMSA_id:227274 AAZL01000001.1 Methanococcus aeolicus str. Nankai-3 prokMSA_id:227275 AAZL01000001.1 Methanococcus aeolicus str. Nankai-3 prokMSA_id:247172 CP000743.1 Methanococcus aeolicus str. Nankai-3 prokMSA_id:247173 CP000743.1 Methanococcus aeolicus str. Nankai-3 prokMSA_id:253591 NC_009635.1 Methanococcus aeolicus str. Nankai-3 prokMSA_id:253592 NC_009635.1 Methanococcus aeolicus str. Nankai-3 prokMSA_id:528819 AB546256.1 Methanococcus aeolicus str. Mic6c09 prokMSA_id:547241 NR_029140.1 Methanococcus aeolicus str. Nankai-3; DSM 17508 1.3.5.1.3.2.3 s__Methanococcus maripaludis 35 seqs 1.3.5.1.3.2.3.142 OTU 35 seqs prokMSA_id:43 AF005049.1 Methanococcus maripaludis str. LL prokMSA_id:106353 BX957219.1 Methanococcus maripaludis str. S2 prokMSA_id:108402 NC_005791.1 Methanococcus maripaludis str. S2 prokMSA_id:128710 NC_005791.1 Methanococcus maripaludis str. S2 prokMSA_id:128712 NC_005791.1 Methanococcus maripaludis str. S2 prokMSA_id:128940 BX957219.1 Methanococcus maripaludis str. S2 prokMSA_id:128941 BX957219.1 Methanococcus maripaludis str. S2 prokMSA_id:179341 DQ841243.1 Microbial deep subsurface gas- water Minami-kanto Japan natural gas field clone MOB7-8 prokMSA_id:187044 AAWI01000002.1 Methanococcus maripaludis str. C5 prokMSA_id:203530 NZ_AAWI01000002.1 Methanococcus maripaludis str. C5 prokMSA_id:205585 NC_009135.1 Methanococcus maripaludis str. C5 prokMSA_id:205586 NC_009135.1 Methanococcus maripaludis str. C5 prokMSA_id:205587 NC_009135.1 Methanococcus maripaludis str. C5 prokMSA_id:216043 CP000609.1 Methanococcus maripaludis str. C5 prokMSA_id:216044 CP000609.1 Methanococcus maripaludis str. C5 prokMSA_id:216045 CP000609.1 Methanococcus maripaludis str. C5 prokMSA_id:219905 AAZM01000001.1 Methanococcus maripaludis str. C7 prokMSA_id:222407 NZ_AAZM01000001.1 Methanococcus maripaludis str. C7 prokMSA_id:247683 CP000867.1 Methanococcus maripaludis str. C6 prokMSA_id:247684 CP000867.1 Methanococcus maripaludis str. C6 prokMSA_id:247685 CP000867.1 Methanococcus maripaludis str. C6 prokMSA_id:249296 CP000745.1 Methanococcus maripaludis str. C7 prokMSA_id:249297 CP000745.1 Methanococcus maripaludis str. C7 prokMSA_id:249298 CP000745.1 Methanococcus maripaludis str. C7 prokMSA_id:252543 NC_009975.1 Methanococcus maripaludis str. C6 prokMSA_id:252544 NC_009975.1 Methanococcus maripaludis str. C6 prokMSA_id:252545 NC_009975.1 Methanococcus maripaludis str. C6 prokMSA_id:255313 NC_009637.1 Methanococcus maripaludis str. C7 prokMSA_id:255314 NC_009637.1 Methanococcus maripaludis str. C7 prokMSA_id:255315 NC_009637.1 Methanococcus maripaludis str. C7 prokMSA_id:285339 BX950229.1 Methanococcus maripaludis str. S2 prokMSA_id:285341 BX950229.1 Methanococcus maripaludis str. S2 prokMSA_id:285342 BX950229.1 Methanococcus maripaludis str. S2 prokMSA_id:517052 AB546258.1 Methanococcus maripaludis str. Mic4c08 prokMSA_id:528689 AB546257.1 Methanococcus maripaludis str. Mic1c10 1.3.5.1.3.2.4 s__Methanococcus vannielii 13 seqs 1.3.5.1.3.2.4.143 OTU 13 seqs prokMSA_id:37 M36507.1 Methanococcus vannielii prokMSA_id:97974 AY196675.1 Methanococcus vannielii str. SB prokMSA_id:204945 AAWX01000004.1 Methanococcus vannielii str. SB prokMSA_id:213180 NZ_AAWX01000004.1 Methanococcus vannielii str. SB prokMSA_id:237858 NC_009634.1 Methanococcus vannielii str. SB prokMSA_id:237859 NC_009634.1 Methanococcus vannielii str. SB prokMSA_id:237860 NC_009634.1 Methanococcus vannielii str. SB prokMSA_id:237861 NC_009634.1 Methanococcus vannielii str. SB prokMSA_id:246442 CP000742.1 Methanococcus vannielii str. SB prokMSA_id:246443 CP000742.1 Methanococcus vannielii str. SB prokMSA_id:246444 CP000742.1 Methanococcus vannielii str. SB prokMSA_id:246445 CP000742.1 Methanococcus vannielii str. SB prokMSA_id:574193 NR_025718.1 Methanococcus vannielii str. SB; ATCC 35089 1.3.5.1.3.3 g__Methanothermococcus 7 seqs 1.3.5.1.3.3.144 OTU 7 seqs prokMSA_id:70805 AF220347.1 archaeal str. vp21 prokMSA_id:175378 AB260056.1 Microbial black exposed hot ridge flank crustal fluids Black rust formation on borehole observatory CORK 1026B clone CORK.A28 prokMSA_id:176683 AB260043.1 Methanothermococcus sp. str. Mc55 prokMSA_id:179424 AB260046.1 Methanothermococcus sp. str. Ep70 prokMSA_id:181475 AB260044.1 Methanothermococcus sp. str. Mc37 prokMSA_id:195078 AB260045.1 Methanothermococcus sp. str. Ep55 prokMSA_id:195243 AB260042.1 Methanothermococcus sp. str. Mc70 1.3.6 c__Methanomicrobia 1634 seqs 1.3.6.1 o__Methanocellales 38 seqs 1.3.6.1.1 f__Methanocellaceae 38 seqs 1.3.6.1.1.1 g__Methanocella 38 seqs 1.3.6.1.1.1.1 Unclassified 22 seqs 1.3.6.1.1.1.1.145 OTU 22 seqs prokMSA_id:533 AF050620.1 contaminated aquifer clone WCHD3-34 prokMSA_id:41595 AJ308972.1 archaeal clone- obtained bulk soil clone AS04-16 prokMSA_id:109146 CR626856.1 fosmid library enriched methanogenic consortium (Rice I) rice field soil clone 4B7mr3 prokMSA_id:109160 CR626857.1 fosmid library enriched methanogenic consortium (Rice I) rice field soil clone 3D10mr4 prokMSA_id:109202 CR626858.1 fosmid library enriched methanogenic consortium (Rice I) rice field soil clone 1B6mr2 prokMSA_id:139580 AB236120.1 Archaeal anaerobic rice paddy soil clone SRP-ProM-B prokMSA_id:139947 AB236112.1 Archaeal anaerobic rice paddy soil clone NRP-ProM-B prokMSA_id:140213 AB236115.1 Archaeal anaerobic rice paddy soil clone SRP-Eth prokMSA_id:140675 AB236067.1 Archaeal anaerobic pond sediment clone SP-ProM-B prokMSA_id:141067 AB243806.1 Archaeal anaerobic rice paddy soil clone NRP-O prokMSA_id:173489 AM114193.1 Genome Rice I archaea-- key methane producers rhizosphere rice field soil clone prokMSA_id:173490 AM114193.1 Genome Rice I archaea-- key methane producers rhizosphere rice field soil clone prokMSA_id:173491 AM114193.1 Genome Rice I archaea-- key methane producers rhizosphere rice field soil clone prokMSA_id:198599 AM114193.2 Genome Rice I archaea-- key methane producers rhizosphere fosmid library enriched methanogenic consortium (Rice I) rice field soil clone prokMSA_id:198600 AM114193.2 Genome Rice I archaea-- key methane producers rhizosphere fosmid library enriched methanogenic consortium (Rice I) rice field soil clone prokMSA_id:198601 AM114193.2 Genome Rice I archaea-- key methane producers rhizosphere fosmid library enriched methanogenic consortium (Rice I) rice field soil clone prokMSA_id:233064 NC_009464.1 methanogenic RC-I prokMSA_id:233065 NC_009464.1 methanogenic RC-I prokMSA_id:233066 NC_009464.1 methanogenic RC-I prokMSA_id:245210 EU155961.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_1G prokMSA_id:251210 EU155960.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B4B prokMSA_id:256698 EU155959.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_12A 1.3.6.1.1.1.2 s__Methanocella paludicola 16 seqs 1.3.6.1.1.1.2.146 OTU 16 seqs prokMSA_id:62889 AB077217.1 oil-contaminated groundwater clone KuA7 prokMSA_id:111156 AB196288.1 Japanese rice paddy soil clone SANAE prokMSA_id:235941 EU155973.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B1H prokMSA_id:243000 EU155966.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B8D prokMSA_id:243281 EU155972.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B1F prokMSA_id:248477 EU155967.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_12F prokMSA_id:249243 EU155963.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B1A prokMSA_id:249563 EU155971.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_11E prokMSA_id:253551 EU155970.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_6C prokMSA_id:253768 EU155968.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B5E prokMSA_id:254640 EU155964.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B6H prokMSA_id:257236 EU155965.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B8C prokMSA_id:257572 EU155969.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_6A prokMSA_id:553524 NR_028164.1 Isolation key methanogens methane emission fields: isolate affiliated clone I Japanese rice paddy soil prokMSA_id:568995 AP011532.1 Methanocella paludicola str. SANAE prokMSA_id:568996 AP011532.1 Methanocella paludicola str. SANAE 1.3.6.2 o__Methanomicrobiales 541 seqs 1.3.6.2.1 Unclassified 79 seqs 1.3.6.2.1.147 OTU 79 seqs prokMSA_id:343 AJ133792.1 hydrocarbon enrichment clone A2 prokMSA_id:85847 AB092917.2 propionate-degrading methanogenic consortium clone BA03 prokMSA_id:101865 AB175345.1 mesophilic anaerobic BSA digester clone BSA1A-10 prokMSA_id:106238 AB175351.1 mesophilic anaerobic BSA digester clone BSA2A-06 prokMSA_id:107368 AY667273.1 TCE-dechlorinating groundwater clone TANA5 prokMSA_id:108551 AY570675.1 biodegraded Canadian oil reservoir clone PL-21A5 prokMSA_id:138156 AB232799.1 Microbial mesophilic chemostat cultivation propionate-degrading methanogenic consortium clone PHA02 prokMSA_id:138263 AB232796.1 Microbial mesophilic chemostat cultivation propionate-degrading methanogenic consortium clone PMA05 prokMSA_id:138305 AB232798.1 Microbial mesophilic chemostat cultivation propionate-degrading methanogenic consortium clone PHA01 prokMSA_id:138628 AB232795.1 Microbial mesophilic chemostat cultivation propionate-degrading methanogenic consortium clone PMA04 prokMSA_id:140279 AB236085.1 Archaeal mesophilic anaerobic granular sludge clone MP-H2-B prokMSA_id:140365 AB236073.1 Archaeal anaerobic river sediment clone AR-Eth-B prokMSA_id:140430 AB236096.1 Archaeal anaerobic lotus field sediment clone LF-H2 prokMSA_id:145187 AB248619.1 mesophilic anaerobic butyrate-degrading reactor clone BHA09 prokMSA_id:145231 AB248618.1 mesophilic anaerobic butyrate-degrading reactor clone BHA08 prokMSA_id:146187 AB244743.1 Microbial Mesophilic Anaerobic Glycerol Degradation Process Chemostat Cultivation mesophilic anaerobic glycerol-fed reactor clone GLY2A01 prokMSA_id:162930 AB266913.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone HsA10fl prokMSA_id:196485 DQ841215.1 Microbial deep subsurface gas- water Minami-kanto Japan natural gas field clone MOB4-1 prokMSA_id:263121 EU591675.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MCSArc_E11 prokMSA_id:334489 EU910621.1 Eukaryal and Archaeal Middle Island sinkhole (Lake Huron USA) sediment clone F5 prokMSA_id:517828 GU135463.1 archaeal Lake Pavin sediment (1 cm) clone Pav-sed-202 prokMSA_id:533432 CU916372.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534902 CU916427.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535303 CU916325.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535694 CU916308.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536744 CU916352.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536844 CU916384.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537593 CU916350.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538034 CU916402.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539389 CU915986.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540194 CU916335.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540304 CU916244.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540887 CU916361.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542643 CU916316.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542695 CU916396.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542960 CU916376.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544385 AB517986.1 Methanospirillum sp. str. Ki8-1 prokMSA_id:544721 CU916383.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545166 CU916303.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545392 CU917075.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545642 CU916449.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547331 AB447800.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0219_029 prokMSA_id:548309 CU916494.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549409 CU916306.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550112 CU916434.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550477 CU916364.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:551034 CU917280.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553846 CU916366.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553929 CU916444.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554128 AB447794.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0215_060 prokMSA_id:554587 AB447815.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_040 prokMSA_id:556058 CU917418.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556135 CU916311.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557747 CU916497.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558382 CU916344.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559022 CU916401.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559222 CU916478.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559625 CU916333.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559645 CU916347.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559987 CU916318.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560096 CU916374.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560150 CU916332.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562484 CU916386.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562546 CU916310.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563356 CU916442.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563497 CU916716.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:564043 CU916181.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:566754 CU916285.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567314 CU917376.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567630 CU917440.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:568701 CU916413.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:569961 CU916971.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:570018 CU916380.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:571560 CU916430.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:571935 CU916467.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:572297 CU916336.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:577252 AB447868.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_079 prokMSA_id:583505 AB447827.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_074 prokMSA_id:588665 AB447812.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_021 1.3.6.2.2 f__ 125 seqs 1.3.6.2.2.1 Unclassified 9 seqs 1.3.6.2.2.1.148 OTU 9 seqs prokMSA_id:140270 AB236052.1 Archaeal anaerobic marine sediment clone KO-Buty-B prokMSA_id:164497 AB266914.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone HsA16fl prokMSA_id:166865 AB266915.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone HsA47fl prokMSA_id:236057 EU155938.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_B11B prokMSA_id:236619 EU155939.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_B8A prokMSA_id:313193 AB447467.1 Methanolinea sp. str. TNR prokMSA_id:521827 GU135466.1 archaeal Lake Pavin sediment (1 cm) clone Pav-sed-205 prokMSA_id:523922 GU135464.1 archaeal Lake Pavin sediment (1 cm) clone Pav-sed-203 prokMSA_id:528521 GU135462.1 archaeal Lake Pavin sediment (1 cm) clone Pav-sed-201 1.3.6.2.2.2 g__Candidatus Methanoregula 48 seqs 1.3.6.2.2.2.1 Unclassified 45 seqs 1.3.6.2.2.2.1.149 OTU 45 seqs prokMSA_id:269 AF050617.1 contaminated aquifer clone WCHD3-07 prokMSA_id:28545 AF424766.1 municipal wastewater sludge clone 19-1 prokMSA_id:37119 AF424773.1 municipal wastewater sludge clone 57-1 prokMSA_id:50440 AF423187.1 Toluene-degrading methanogenic consortium clone M1 consortium prokMSA_id:62887 AB077222.1 oil-contaminated groundwater clone KuA12 prokMSA_id:66896 AJ312014.1 DCP-dechlorinating consortium clone SHB-200 prokMSA_id:77921 AJ459899.1 bog peat clone AMC 1 M21 prokMSA_id:85604 AY251027.1 freshwater sediment clone 15ar18 prokMSA_id:107512 AY667274.1 TCE-dechlorinating groundwater clone TANA6 prokMSA_id:139532 AB236066.1 Archaeal anaerobic pond sediment clone SP-ProM prokMSA_id:172057 AB266908.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone YkA77fl prokMSA_id:173406 AB266918.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone DtA92fl prokMSA_id:202562 AY693809.1 microbial granular treating cassava starch wastewater approach anaerobic sludge clone ARC8 prokMSA_id:236273 EU155978.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_12H prokMSA_id:237697 EU155977.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_2A prokMSA_id:237725 EU155975.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_1C prokMSA_id:237758 EU155933.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_1B prokMSA_id:238101 EU155928.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_B4B prokMSA_id:239037 EU155929.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_9A prokMSA_id:240012 EU155937.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_4H prokMSA_id:240565 EU155925.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_1G prokMSA_id:242597 AB329661.1 Layered structure archaeal and their situ activities anaerobic granules UASB granule clone UASB27 prokMSA_id:243459 EU155924.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_29A prokMSA_id:248224 EU155930.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_10C prokMSA_id:248666 EU155919.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_17C prokMSA_id:250214 EU155934.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_15E prokMSA_id:250625 EU155927.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_3E prokMSA_id:251162 EU155935.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_B6B prokMSA_id:253344 EU155936.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_B4A prokMSA_id:254217 EU155932.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_B3H prokMSA_id:254394 EU155976.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_3D prokMSA_id:256465 AB262702.1 microorganisms shal subsurface Sarobetsu mire peat soil clone HSM050P--1 prokMSA_id:257944 EU155926.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_1F prokMSA_id:258021 EU155931.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_11B prokMSA_id:258082 EU155979.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_4F prokMSA_id:310778 EU887810.1 Isolation anaerobes main Nisargruna biogas plant anaerobic digester isolate SN21Candidatus Methanoregula boonei str. SN21 prokMSA_id:315627 EU887822.1 Isolation anaerobes main Nisargruna biogas plant anaerobic digester isolate SN15anaerobic methanogenic str. SN15 prokMSA_id:322786 EU910620.1 Eukaryal and Archaeal Middle Island sinkhole (Lake Huron USA) sediment clone F18 prokMSA_id:342441 EU887826.1 Isolation anaerobes main Nisargruna biogas plant anaerobic digester isolate SN19Candidatus Methanoregula boonei str. SN19 prokMSA_id:349000 EU910625.1 Eukaryal and Archaeal Middle Island sinkhole (Lake Huron USA) sediment clone D4 prokMSA_id:349670 EU887821.1 Isolation anaerobes main Nisargruna biogas plant anaerobic digester isolate SN14Candidatus Methanoregula boonei str. SN14 prokMSA_id:355727 EU887811.1 Isolation anaerobes main Nisargruna biogas plant anaerobic digester isolate SN22anaerobic methanogenic str. SN22 prokMSA_id:536433 AB479390.1 Isolation Methanomicrobiales methanogen mesophilic methanogenic granular sludge isolate SMSPMethanomicrobiales str. SMSP prokMSA_id:538807 AB447773.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0219_065 prokMSA_id:585509 FN429777.1 Biogeochemistry -activity cold seep Larsen B area western Weddell Sea Antarctica marine sediments (1.1 mbsf) 850 m water depth clone ANTXXIII_706-4_Arch216 1.3.6.2.2.2.2 s__Candidatus Methanoregula boonei 3 seqs 1.3.6.2.2.2.2.150 OTU 3 seqs prokMSA_id:150346 DQ282124.1 Isolation acidiphilic methanogen acidic peat bog Methanogenic intergenic acer and isolate 6A8methanogenic str. 6A8 prokMSA_id:242632 CP000780.1 Candidatus genome isolate 6A8Candidatus Methanoregula boonei str. 6A8 prokMSA_id:243787 NC_009712.1 Candidatus Methanoregula boonei str. 6A8 1.3.6.2.2.3 g__Methanocalculus 17 seqs 1.3.6.2.2.3.1 Unclassified 15 seqs 1.3.6.2.2.3.1.151 OTU 15 seqs prokMSA_id:298 AB008853.1 Methanocalculus pumilus prokMSA_id:299 AF033672.1 Methanocalculus halotolerans str. SEBR 4845 prokMSA_id:42125 AF172443.2 Methanocalculus taiwanensis str. P2F9704a prokMSA_id:45899 AF411470.1 Methanocalculus halotolerans str. P2F9705; OCM 672 prokMSA_id:108439 AY586393.1 fatty acid-degrading consortium clone FA-PA1 prokMSA_id:108518 AY570653.1 biodegraded Canadian oil reservoir clone PL-21A11 prokMSA_id:108550 AY570677.1 biodegraded Canadian oil reservoir clone PL-22A11 prokMSA_id:108556 AY570680.1 biodegraded Canadian oil reservoir clone PL-35A9 prokMSA_id:204589 DQ987524.1 Methanocalculus sp. str. LA7 prokMSA_id:204718 DQ987523.1 Methanocalculus sp. str. LA5 prokMSA_id:205797 DQ987522.1 Methanocalculus sp. str. LA4 prokMSA_id:207531 DQ987525.1 Methanocalculus sp. str. LA2 prokMSA_id:239098 AB243812.1 Methods Investigate Microbial Niigata oil well clone Niigata-a01 prokMSA_id:535788 NR_024870.1 Methanocalculus halotolerans str. SEBR 4845; OCM 470 prokMSA_id:574267 AB539927.1 Evidence syntrophic acetate oxidation coupled hydrogenotrophic methanogenesis -temperature petroleum reservoir Yabase oil field clone AR80A56 1.3.6.2.2.3.2 s__Methanocalculus chunghsingensis 2 seqs 1.3.6.2.2.3.2.152 OTU 2 seqs prokMSA_id:74785 AY026256.1 Methanocalculus sp. str. O1F9702c prokMSA_id:83974 AY234332.1 Methanocalculus chunghsingensis str. O1F9704a 1.3.6.2.2.4 g__Methanolinea 38 seqs 1.3.6.2.2.4.153 OTU 38 seqs prokMSA_id:100055 AB162774.1 anaerobic digested sludge isolate str. NOBI-1 prokMSA_id:102663 AY693813.1 anaerobic sludge clone ARC19 prokMSA_id:138990 AB233296.1 Arcaheal methanogenic sludges UASB granular sludge clone CG-6 prokMSA_id:140300 AB236088.1 Archaeal mesophilic anaerobic granular sludge clone MP-Pro-B prokMSA_id:158779 DQ478739.1 UASB reactor treating brewery wastewater clone CLONG35 prokMSA_id:163762 AB266889.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone SmA78fl prokMSA_id:163892 AB266893.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone SwA47fl prokMSA_id:165675 AB266906.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone YkA13fl prokMSA_id:175935 EF198037.1 Microbial structures and thermophilic methanogenic consortia anaerobic mesophilic phenol-degrading enrichment clone MP126 prokMSA_id:237485 AB329662.1 Layered structure archaeal and their situ activities anaerobic granules UASB granule clone UASB28 prokMSA_id:259704 EU591659.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MTSArc_C11 prokMSA_id:264985 EU591662.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MTSArc_E4 prokMSA_id:272833 AB434764.1 Treatment -strength wastewater anaerobic down-f hanging sponge (AnDHS) reactor temperature methanogenic sludge clone AnDHS-A2 prokMSA_id:285704 EU662676.1 Microbial -temperature sludges sludge manure pit clone P64 prokMSA_id:334134 FJ167434.1 microbiology granular sludge under autotrophic mixotrophic and heterotrophic denitrification conditions denitrifying bioreactor clone R2A-2 prokMSA_id:361178 EU857626.1 Isolation methanogenic Nisargruna Biogas Plant clone prokMSA_id:533463 CU916961.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535442 CU916784.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537687 CU917092.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541593 CU917090.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541835 CU916997.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543053 CU916777.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543821 CU916804.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543986 CU917219.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545227 CU916085.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547778 CU916765.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552278 CU916754.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555575 CU916983.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556942 CU917179.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557395 CU916861.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558622 CU916903.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:561383 CU916869.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:564767 CU917055.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:565071 CU916884.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:569604 CU916827.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:572226 CU916956.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:572327 CU917069.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575291 CU916154.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone 1.3.6.2.2.5 g__Methanosphaerula 13 seqs 1.3.6.2.2.5.1 s__Methanosphaerula palustris 13 seqs 1.3.6.2.2.5.1.154 OTU 13 seqs prokMSA_id:241981 EU156000.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus rich minerotrophic fen isolate E1-9cCandidatus Methanosphaerula palustris str. E1-9c prokMSA_id:338990 EU910630.1 Eukaryal and Archaeal Middle Island sinkhole (Lake Huron USA) sediment clone G8 prokMSA_id:357462 ABZB01000005.1 Sequencing draft and assembly Candidatus ctg0 whole genome shotgun isolate E1-9cCandidatus Methanosphaerula palustris str. E1-9c prokMSA_id:363560 NZ_ABZB01000001.1 Sequencing draft and assembly Candidatus ctg4 whole genome shotgun isolate E1-9cCandidatus Methanosphaerula palustris str. E1-9c prokMSA_id:367303 NZ_ABZB01000005.1 Sequencing draft and assembly Candidatus ctg0 whole genome shotgun isolate E1-9cCandidatus Methanosphaerula palustris str. E1-9c prokMSA_id:367863 ABZB01000001.1 Sequencing draft and assembly Candidatus ctg4 whole genome shotgun isolate E1-9cCandidatus Methanosphaerula palustris str. E1-9c prokMSA_id:368739 ABZB01000004.1 Sequencing draft and assembly Candidatus ctg5 whole genome shotgun isolate E1-9cCandidatus Methanosphaerula palustris str. E1-9c prokMSA_id:368755 NZ_ABZB01000004.1 Sequencing draft and assembly Candidatus ctg5 whole genome shotgun isolate E1-9cCandidatus Methanosphaerula palustris str. E1-9c prokMSA_id:524986 CP001338.1 Methanosphaerula palustris str. E1-9c prokMSA_id:524987 CP001338.1 Methanosphaerula palustris str. E1-9c prokMSA_id:524988 CP001338.1 Methanosphaerula palustris str. E1-9c prokMSA_id:549891 AB494242.1 microbial anaerobic digester sludge clone WA23 prokMSA_id:557121 CU917455.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone 1.3.6.2.3 f__Methanocorpusculaceae 84 seqs 1.3.6.2.3.1 Unclassified 47 seqs 1.3.6.2.3.1.155 OTU 47 seqs prokMSA_id:537015 AB541641.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_3 prokMSA_id:537657 AB541788.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_26 prokMSA_id:538085 AB541645.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_7 prokMSA_id:550047 AB541701.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_7 prokMSA_id:551081 AB541700.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_6 prokMSA_id:551565 AB541793.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_31 prokMSA_id:553383 AB541780.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_18 prokMSA_id:553439 AB541821.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_59 prokMSA_id:554610 AB541698.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_4 prokMSA_id:555515 AB541704.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_10 prokMSA_id:555806 AB541648.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_10 prokMSA_id:556817 AB541574.1 Changes archaeal structure during composting process cattle manure compost clone K08_2_1 prokMSA_id:557659 AB541646.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_8 prokMSA_id:558437 AB541656.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_18 prokMSA_id:561024 AB541786.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_24 prokMSA_id:561474 AB541790.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_28 prokMSA_id:562092 AB541769.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_7 prokMSA_id:562457 AB541771.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_9 prokMSA_id:565730 AB541926.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_3 prokMSA_id:567193 AB541774.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_12 prokMSA_id:568084 AB541787.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_25 prokMSA_id:569348 AB541773.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_11 prokMSA_id:570431 AB541647.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_9 prokMSA_id:570920 AB541702.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_8 prokMSA_id:572333 AB541784.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_22 prokMSA_id:573841 AB541924.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_1 prokMSA_id:575240 AB541791.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_29 prokMSA_id:576113 AB541654.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_16 prokMSA_id:577046 AB541764.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_2 prokMSA_id:578635 AB541639.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_1 prokMSA_id:578820 AB541925.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_2 prokMSA_id:579575 AB541789.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_27 prokMSA_id:579650 AB541657.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_19 prokMSA_id:580011 AB541792.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_30 prokMSA_id:580436 AB541775.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_13 prokMSA_id:580594 AB541653.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_15 prokMSA_id:582442 AB541695.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_1 prokMSA_id:583099 AB541640.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_2 prokMSA_id:583591 AB541779.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_17 prokMSA_id:585065 AB541651.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_13 prokMSA_id:586086 AB541783.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_21 prokMSA_id:586376 AB541703.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_9 prokMSA_id:586658 AB541767.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_5 prokMSA_id:587249 AB541781.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_19 prokMSA_id:588781 AB541576.1 Changes archaeal structure during composting process cattle manure compost clone K08_2_3 prokMSA_id:588832 AB541699.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_5 prokMSA_id:594283 AB541777.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_15 1.3.6.2.3.2 g__Methanocorpusculum 37 seqs 1.3.6.2.3.2.1 Unclassified 31 seqs 1.3.6.2.3.2.1.156 OTU 31 seqs prokMSA_id:39974 AY057068.1 Methanocorpusculum parvum str. IF9601b prokMSA_id:71599 AF419634.1 Guaymas Basin hydrothermal sediment clone C1_R002 prokMSA_id:83370 AY260434.1 Methanocorpusculum sp. str. MSP prokMSA_id:85117 AY260436.1 Methanocorpusculum labreanum str. DSM 4855 prokMSA_id:86427 AY260435.1 Methanocorpusculum parvum str. DSM 3828 prokMSA_id:97068 AY196676.1 Methanocorpusculum bavaricum str. SZSXXZ prokMSA_id:108524 AY570655.1 biodegraded Canadian oil reservoir clone PL-24A5 prokMSA_id:108525 AY570659.1 biodegraded Canadian oil reservoir clone PL-38A5 prokMSA_id:108526 AY570660.1 biodegraded Canadian oil reservoir clone PL-38A8 prokMSA_id:108549 AY570676.1 biodegraded Canadian oil reservoir clone PL-21A9 prokMSA_id:108553 AY570678.1 biodegraded Canadian oil reservoir clone PL-23A11 prokMSA_id:137843 AY835416.2 Methanogen Evidenced Methyl Coenzyme M Reductase (mcrA) Genes Hydrothermal Sediments Guaymas Basin hydrothermal sediment clone 7A07 prokMSA_id:140687 AB237736.1 microorganisms deep subsurface groundwater sedimentary rock milieu clone HDBW-WA03 prokMSA_id:146773 AY835415.2 Methanogen Evidenced Methyl Coenzyme M Reductase (mcrA) Genes Hydrothermal Sediments Guaymas Basin hydrothermal sediment clone 4F12 prokMSA_id:208636 AB288242.1 Cultivation methanogens and deep sedimentary aquifers northern Japan enrichment aquifer artesian spring clone HA-E2 prokMSA_id:215024 AB288280.1 Methanocorpusculum sp. T08 prokMSA_id:215967 AB288279.1 Methanocorpusculum sp. T07 prokMSA_id:280942 EU662683.1 Microbial -temperature sludges sludge manure pit clone S19 prokMSA_id:282510 EU662687.1 Microbial -temperature sludges sludge manure pit clone T4 prokMSA_id:282657 EU662671.1 Microbial -temperature sludges sludge manure pit clone P29 prokMSA_id:282905 EU662677.1 Microbial -temperature sludges sludge manure pit clone S2 prokMSA_id:282961 EU662667.1 Microbial -temperature sludges sludge manure pit clone P6 prokMSA_id:283888 EU662690.1 Microbial -temperature sludges sludge manure pit clone T9 prokMSA_id:284165 EU662684.1 Microbial -temperature sludges sludge manure pit clone S27 prokMSA_id:536310 AB541580.1 Changes archaeal structure during composting process cattle manure compost clone K08_2_7 prokMSA_id:559854 AB494245.1 microbial anaerobic digester sludge clone WA50 prokMSA_id:565033 AB494244.1 microbial anaerobic digester sludge clone WA28 prokMSA_id:574210 AB541581.1 Changes archaeal structure during composting process cattle manure compost clone K08_2_8 prokMSA_id:584306 NR_029086.1 Methanocorpusculum labreanum str. Z; DSM 4855 prokMSA_id:587282 AB541578.1 Changes archaeal structure during composting process cattle manure compost clone K08_2_5 prokMSA_id:590832 AB541577.1 Changes archaeal structure during composting process cattle manure compost clone K08_2_4 1.3.6.2.3.2.2 s__Methanocorpusculum labreanum 6 seqs 1.3.6.2.3.2.2.157 OTU 6 seqs prokMSA_id:201455 CP000559.1 Methanocorpusculum labreanum str. Z prokMSA_id:201456 CP000559.1 Methanocorpusculum labreanum str. Z prokMSA_id:201457 CP000559.1 Methanocorpusculum labreanum str. Z prokMSA_id:212360 NC_008942.1 Methanocorpusculum labreanum str. Z prokMSA_id:212361 NC_008942.1 Methanocorpusculum labreanum str. Z prokMSA_id:212362 NC_008942.1 Methanocorpusculum labreanum str. Z 1.3.6.2.4 f__Methanomicrobiaceae 224 seqs 1.3.6.2.4.1 Unclassified 21 seqs 1.3.6.2.4.1.158 OTU 21 seqs prokMSA_id:39372 AF419645.1 Guaymas Basin hydrothermal sediment clone CS_R002 prokMSA_id:82879 AB092916.1 propionate-degrading methanogenic consortium clone AA01 prokMSA_id:102338 AB114310.1 thermophilic anaerobic municipal solid waste digester clone MANA02 prokMSA_id:102858 AJ576206.1 landfill leachate clone GZK3 prokMSA_id:106479 AB114302.1 thermophilic anaerobic municipal solid waste digester clone MAA02 prokMSA_id:137776 AY835414.2 Methanogen Evidenced Methyl Coenzyme M Reductase (mcrA) Genes Hydrothermal Sediments Guaymas Basin hydrothermal sediment clone 4E12 prokMSA_id:137807 AY835413.2 Methanogen Evidenced Methyl Coenzyme M Reductase (mcrA) Genes Hydrothermal Sediments Guaymas Basin hydrothermal sediment clone 4A12 prokMSA_id:138136 AB232789.1 Microbial mesophilic chemostat cultivation propionate-degrading methanogenic consortium clone PLA04 prokMSA_id:138354 AB232793.1 Microbial mesophilic chemostat cultivation propionate-degrading methanogenic consortium clone PMA02 prokMSA_id:138359 AB232786.1 Microbial mesophilic chemostat cultivation propionate-degrading methanogenic consortium clone PLA01 prokMSA_id:138483 AB232792.1 Microbial mesophilic chemostat cultivation propionate-degrading methanogenic consortium clone PMA01 prokMSA_id:138603 AB232790.1 Microbial mesophilic chemostat cultivation propionate-degrading methanogenic consortium clone PLA05 prokMSA_id:138873 AB232788.1 Microbial mesophilic chemostat cultivation propionate-degrading methanogenic consortium clone PLA03 prokMSA_id:138954 AB233301.1 Arcaheal methanogenic sludges anaerobic digested sludge clone ND-4 prokMSA_id:151063 CT573625.1 Evry municipal wastewater treatment plant clone 059F05_A_SD_P93 prokMSA_id:165678 DQ787476.1 Methanoculleus sp. str. ZC-2 prokMSA_id:173696 DQ787475.1 Methanoculleus sp. str. ZC-3 prokMSA_id:261976 EU591665.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MCSArc_A1 prokMSA_id:263234 EU591664.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MTSArc_G8 prokMSA_id:275640 EU591667.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MCSArc_A2 prokMSA_id:513268 FJ712382.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-25-A23 1.3.6.2.4.2 g__Methanoculleus 146 seqs 1.3.6.2.4.2.1 Unclassified 74 seqs 1.3.6.2.4.2.1.159 OTU 74 seqs prokMSA_id:267 Y16382.1 Methanoculleus palmolei str. DSM 4273 prokMSA_id:295 AF028693.1 Methanoculleus marisnigri str. CoCam prokMSA_id:26720 AB038795.2 Methanoculleus chikugoensis str. MG62 prokMSA_id:70145 AF531178.1 Methanoculleus submarinus str. Nankai-1 OCM 780T (Oregon Collection Methanogens) prokMSA_id:100057 AJ576236.1 landfill leachate clone GZK64 prokMSA_id:100657 AB089178.2 Methanoculleus sp. str. IIE1 prokMSA_id:102708 AJ576205.1 landfill leachate clone GZK1 prokMSA_id:104373 AJ576241.1 landfill leachate clone GZK76 prokMSA_id:106637 AB114303.1 thermophilic anaerobic municipal solid waste digester clone MAA03 prokMSA_id:106793 AB114304.1 thermophilic anaerobic municipal solid waste digester clone MAA04 prokMSA_id:106940 AB114305.1 thermophilic anaerobic municipal solid waste digester clone MAA05 prokMSA_id:107096 AB114306.1 thermophilic anaerobic municipal solid waste digester clone MAA06 prokMSA_id:108530 AY570665.1 biodegraded Canadian oil reservoir clone PL-9A5 prokMSA_id:138251 AB232794.1 Microbial mesophilic chemostat cultivation propionate-degrading methanogenic consortium clone PMA03 prokMSA_id:138600 AB232800.1 Microbial mesophilic chemostat cultivation propionate-degrading methanogenic consortium clone PHA03 prokMSA_id:139562 AB237737.1 microorganisms deep subsurface groundwater sedimentary rock milieu clone HDBW-WA04 prokMSA_id:139772 AB237735.1 microorganisms deep subsurface groundwater sedimentary rock milieu clone HDBW-WA02 prokMSA_id:139811 AB237734.1 microorganisms deep subsurface groundwater sedimentary rock milieu clone HDBW-WA01 prokMSA_id:139870 AB236082.1 Archaeal anaerobic lake sediment clone SL-Pro-B prokMSA_id:139961 AB236105.1 Archaeal anaerobic lotus field sediment clone LF-ProM prokMSA_id:140038 AB236103.1 Archaeal anaerobic lotus field sediment clone LF-Buty-B prokMSA_id:140187 AB236111.1 Archaeal anaerobic rice paddy soil clone NRP-Pro prokMSA_id:140425 AB236057.1 Archaeal anaerobic rice paddy soil clone NR-ProM prokMSA_id:147456 AB248621.1 mesophilic anaerobic butyrate-degrading reactor clone BHA11 prokMSA_id:148507 AB248610.1 mesophilic anaerobic butyrate-degrading reactor clone BLA07 prokMSA_id:149591 AB248609.1 mesophilic anaerobic butyrate-degrading reactor clone BLA06 prokMSA_id:151115 CT573511.1 Evry municipal wastewater treatment plant clone 015H09_A_SD_P15 prokMSA_id:151477 CT573670.1 Evry municipal wastewater treatment plant clone 058H12_A_SD_P93 prokMSA_id:152045 CT573527.1 Evry municipal wastewater treatment plant clone 015F03_A_SD_P15 prokMSA_id:153189 CT573685.1 Evry municipal wastewater treatment plant clone 058G03_A_SD_P93 prokMSA_id:154516 CT573634.1 Evry municipal wastewater treatment plant clone 059E05_A_SD_P93 prokMSA_id:154517 CT573723.1 Evry municipal wastewater treatment plant clone 058C04_A_SD_P93 prokMSA_id:154673 CT573662.1 Evry municipal wastewater treatment plant clone 059A11_A_SD_P93 prokMSA_id:155284 CT573603.1 Evry municipal wastewater treatment plant clone 014B03_A_SD_P15 prokMSA_id:155613 CT573517.1 Evry municipal wastewater treatment plant clone 015G09_A_SD_P15 prokMSA_id:156326 CT573705.1 Evry municipal wastewater treatment plant clone 058E03_A_SD_P93 prokMSA_id:163521 DQ518348.1 Methanoculleus sp. str. MQ-4 prokMSA_id:203668 AB288277.1 Methanoculleus sp. T03 prokMSA_id:203820 AB288245.1 Cultivation methanogens artesian spring and aquifers northern Japan enrichment deep subsurface groundwater sedimentary rock milieu clone HB-E2 prokMSA_id:204022 AB288278.1 Methanoculleus sp. T05 prokMSA_id:205382 AB288282.1 Methanoculleus sp. T14 prokMSA_id:206344 AB288239.1 Cultivation methanogens artesian spring and aquifers northern Japan deep subsurface groundwater sedimentary rock milieu clone HDBW-WA01-C01 prokMSA_id:206368 AB294249.1 Microbial structure deep coal seem groundwater clone YWA01 prokMSA_id:206406 AB288253.1 Cultivation methanogens artesian spring and aquifers northern Japan enrichment deep subsurface groundwater sedimentary rock milieu clone HD-E1 prokMSA_id:206813 AB288246.1 Cultivation methanogens artesian spring and aquifers northern Japan enrichment deep subsurface groundwater sedimentary rock milieu clone HB-E3 prokMSA_id:207838 AB288254.1 Cultivation methanogens artesian spring and aquifers northern Japan enrichment deep subsurface groundwater sedimentary rock milieu clone HD-E2 prokMSA_id:207871 AB288276.1 Methanoculleus sp. T02 prokMSA_id:208079 AB288273.1 Methanoculleus sp. M07 prokMSA_id:211991 AB288274.1 Methanoculleus sp. M11 prokMSA_id:212962 AB288258.1 Cultivation methanogens artesian spring and sedimentary aquifers northern Japan enrichment deep subsurface groundwater coal mine field clone YC-E4 prokMSA_id:213002 AB288251.1 Cultivation methanogens artesian spring and aquifers northern Japan enrichment deep subsurface groundwater sedimentary rock milieu clone HC-E5 prokMSA_id:213055 DQ987521.1 Methanoculleus sp. str. LH2 prokMSA_id:214135 AB288263.1 Methanoculleus sp. HC-1 prokMSA_id:214926 AB294250.1 Microbial structure deep coal seem groundwater clone YWA02 prokMSA_id:215393 AB288252.1 Cultivation methanogens artesian spring and aquifers northern Japan enrichment deep subsurface groundwater sedimentary rock milieu clone HC-E6 prokMSA_id:270985 EU591669.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MCSArc_B6 prokMSA_id:283625 AB436897.1 Methanoculleus sp. T10 prokMSA_id:286653 EU662678.1 Microbial -temperature sludges sludge manure pit clone S3 prokMSA_id:313918 FJ205758.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A12 prokMSA_id:314589 FJ205766.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A32 prokMSA_id:329342 FJ205788.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A115 prokMSA_id:336880 FJ205773.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A52 prokMSA_id:344888 FJ205767.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A34 prokMSA_id:350986 FJ205781.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A76 prokMSA_id:356399 EU722338.1 Methanoculleus marisnigri MCTS-2 prokMSA_id:433307 FJ982773.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMPUFLSS70m_12 prokMSA_id:445793 FJ977567.1 Methanoculleus sp. str. HC prokMSA_id:547526 NR_028856.1 Methanoculleus submarinus str. Nankai-1; OCM 780 prokMSA_id:550384 NR_028253.1 Methanoculleus palmolei str. DSM 4273 prokMSA_id:550991 AB494250.1 microbial anaerobic digester sludge clone SA36 prokMSA_id:555630 CU917454.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:578368 AB541837.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_16 prokMSA_id:580580 GQ340669.1 Methanoculleus sp. str. LH prokMSA_id:586327 AB541637.1 Changes archaeal structure during composting process cattle manure compost clone K08_21_18 1.3.6.2.4.2.2 s__Methanoculleus bourgensis 57 seqs 1.3.6.2.4.2.2.160 OTU 57 seqs prokMSA_id:69300 AB065298.1 Methanoculleus bourgensis str. CB1 prokMSA_id:98731 AY196674.1 Methanoculleus bourgensis str. MS2 prokMSA_id:101205 AB175341.1 mesophilic anaerobic BSA digester clone BSA1A-06 prokMSA_id:101360 AB175342.1 mesophilic anaerobic BSA digester clone BSA1A-07 prokMSA_id:102023 AB175346.1 mesophilic anaerobic BSA digester clone BSA2A-01 prokMSA_id:102176 AB175347.1 mesophilic anaerobic BSA digester clone BSA2A-02 prokMSA_id:102319 AB175348.1 mesophilic anaerobic BSA digester clone BSA2A-03 prokMSA_id:102478 AB175349.1 mesophilic anaerobic BSA digester clone BSA2A-04 prokMSA_id:103152 AJ576208.1 landfill leachate clone GZK7 prokMSA_id:103398 AJ576222.1 landfill leachate clone GZK33 prokMSA_id:104286 AJ550158.1 Methanoculleus sp. str. dm2 prokMSA_id:105830 AB175336.1 mesophilic anaerobic BSA digester clone BSA1A-01 prokMSA_id:105981 AB175337.1 mesophilic anaerobic BSA digester clone BSA1A-02 prokMSA_id:106083 AB175350.1 mesophilic anaerobic BSA digester clone BSA2A-05 prokMSA_id:106133 AB175338.1 mesophilic anaerobic BSA digester clone BSA1A-03 prokMSA_id:106293 AB175339.1 mesophilic anaerobic BSA digester clone BSA1A-04 prokMSA_id:138250 DQ150254.1 Methanoculleus bourgensis str. NF-1 prokMSA_id:139766 AB236104.1 Archaeal anaerobic lotus field sediment clone LF-Pro prokMSA_id:151753 CT573574.1 Evry municipal wastewater treatment plant clone 014G07_A_SD_P15 prokMSA_id:154057 CT573616.1 Evry municipal wastewater treatment plant clone 059G07_A_SD_P93 prokMSA_id:258823 EU369609.1 study prokaryotic approach landfill clone 5.5ft C35A prokMSA_id:259869 EU369608.1 study prokaryotic approach landfill clone 5.5ft C32A prokMSA_id:260576 EU369616.1 study prokaryotic approach landfill clone 5.5ft C67A prokMSA_id:260649 EU369611.1 study prokaryotic approach landfill clone 5.5ft C40A prokMSA_id:263589 EU369620.1 study prokaryotic approach landfill clone 5.5ft C108A prokMSA_id:264244 EU369607.1 study prokaryotic approach landfill clone 5.5ft C30A prokMSA_id:264598 EU369624.1 study prokaryotic approach landfill clone 5.5ft C141A prokMSA_id:265547 EU369612.1 study prokaryotic approach landfill clone 5.5ft C42A prokMSA_id:267329 EU369622.1 study prokaryotic approach landfill clone 5.5ft C124A prokMSA_id:267774 EU369626.1 study prokaryotic approach landfill clone 5.5ft C150A prokMSA_id:270610 EU369613.1 study prokaryotic approach landfill clone 5.5ft C48A prokMSA_id:274495 EU369603.1 study prokaryotic approach landfill clone 5.5ft C1A prokMSA_id:275090 EU369621.1 study prokaryotic approach landfill clone 5.5ft C121A prokMSA_id:276791 EU369615.1 study prokaryotic approach landfill clone 5.5ft C58A prokMSA_id:309935 FJ205780.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A72 prokMSA_id:310998 FJ205770.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A40 prokMSA_id:312521 FJ205765.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A28 prokMSA_id:315003 FJ205787.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A114 prokMSA_id:319147 FJ205761.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A18 prokMSA_id:319380 FJ205755.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A07 prokMSA_id:326381 FJ205777.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A60 prokMSA_id:333311 FJ205784.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A108 prokMSA_id:334385 FJ205759.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A14 prokMSA_id:336173 FJ205775.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A55 prokMSA_id:342698 FJ205754.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A05 prokMSA_id:344836 FJ205785.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A111 prokMSA_id:344925 FJ205771.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A41 prokMSA_id:344959 FJ205763.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A22 prokMSA_id:347651 FJ205756.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A09 prokMSA_id:348813 FJ205764.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A26 prokMSA_id:351077 FJ205786.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A113 prokMSA_id:351774 FJ205779.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A70 prokMSA_id:352464 FJ205753.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A02 prokMSA_id:354241 FJ205768.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A35 prokMSA_id:355268 FJ205789.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A161 prokMSA_id:355559 FJ205774.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A53 prokMSA_id:559085 AB494256.1 microbial anaerobic digester sludge clone FA54 1.3.6.2.4.2.3 s__Methanoculleus marisnigri 4 seqs 1.3.6.2.4.2.3.161 OTU 4 seqs prokMSA_id:167871 NZ_AASI01000001.1 Methanoculleus marisnigri str. JR1 prokMSA_id:168273 AASI01000001.1 Methanoculleus marisnigri str. JR1 prokMSA_id:215263 CP000562.1 Methanoculleus marisnigri str. JR1 prokMSA_id:216145 NC_009051.1 Methanoculleus marisnigri str. JR1 1.3.6.2.4.2.4 s__Methanoculleus thermophilus 11 seqs 1.3.6.2.4.2.4.162 OTU 11 seqs prokMSA_id:304 M59129.1 Methanoculleus thermophilicus prokMSA_id:91502 AB065297.1 Methanoculleus thermophilus str. CR-1 prokMSA_id:106322 AB114301.1 thermophilic anaerobic municipal solid waste digester clone MAA01 prokMSA_id:107246 AB114307.1 thermophilic anaerobic municipal solid waste digester clone MAA07 prokMSA_id:107394 AB114308.1 thermophilic anaerobic municipal solid waste digester clone MAA08 prokMSA_id:108784 AJ862839.1 Methanoculleus thermophilus str. DSM 2832 prokMSA_id:139823 AB236110.1 Archaeal anaerobic rice paddy soil clone NRP-Buty prokMSA_id:182138 EF118904.1 Methanoculleus thermophilus str. JB-1 prokMSA_id:574840 NR_028156.1 Methanoculleus thermophilus str. CR-1; DSM 2373 prokMSA_id:585414 AB541895.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_39 prokMSA_id:589003 GQ328817.1 Reduction accumulated volatile fatty acids acetate-degrading enrichment 1L labscale inoculated anaerobic digester sludge clone 1A 1.3.6.2.4.3 g__Methanofollis 13 seqs 1.3.6.2.4.3.1 Unclassified 8 seqs 1.3.6.2.4.3.1.163 OTU 8 seqs prokMSA_id:22804 AF262035.1 Methanofollis aquaemaris str. N2F9704 prokMSA_id:99463 AY186542.1 Methanofollis aquaemaris str. N2M9704 prokMSA_id:139622 AB236106.1 Archaeal anaerobic lotus field sediment clone LF-ProM-B prokMSA_id:139726 AB236083.1 Archaeal anaerobic lake sediment clone SL-ProM prokMSA_id:227817 EF112193.1 Methanofollis sp. str. YCM3 prokMSA_id:230172 EF112195.1 Methanofollis sp. str. YCM4 prokMSA_id:234172 EF112191.1 Methanofollis sp. str. YCM2 prokMSA_id:239243 AB371073.1 Methanofollis sp. str. HASU 1.3.6.2.4.3.2 s__Methanofollis liminatans 5 seqs 1.3.6.2.4.3.2.164 OTU 5 seqs prokMSA_id:328 Y16428.1 Methanofollis liminatans str. DSM 4140 prokMSA_id:329 Y16429.1 Methanofollis liminatans str. DSM 10196 prokMSA_id:96483 AY196677.1 Methanofollis liminatans prokMSA_id:138837 AB233303.1 Arcaheal methanogenic sludges UASB granular sludge clone CG-H2-ARC-1 prokMSA_id:552299 NR_028254.1 Methanofollis liminatans str. GKZPZ; DSM 4140 1.3.6.2.4.4 g__Methanogenium 11 seqs 1.3.6.2.4.4.1 s__Methanogenium marinum 11 seqs 1.3.6.2.4.4.1.165 OTU 11 seqs prokMSA_id:139746 AB236049.1 Archaeal anaerobic marine sediment clone KO prokMSA_id:157304 DQ058822.1 Cultivation methanogens shal marine sediments Hydrate Ridge Oregon enrichment clone HR-MM-Enrichment-022 prokMSA_id:163137 DQ177343.1 Methanogenium boonei str. AK-7 prokMSA_id:166282 DQ177345.1 Methanogenium marinum str. AK-3 prokMSA_id:173672 DQ177344.1 Methanogenium marinum str. AK-1 prokMSA_id:187147 DQ280483.1 Archaea marine sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov Methanomicrobiales 'SBAK-CO2-reducing Enrichment-2' prokMSA_id:192860 DQ280484.1 Archaea marine sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov Methanomicrobiales 'SBAK-CO2-reducing Enrichment-3' prokMSA_id:195161 DQ280487.1 Methanococcoides sp. SBAK-TMA-1 prokMSA_id:195570 DQ280486.1 Archaea marine sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov Methanomicrobiales 'SBAK-CO2-reducing Enrichment-8' prokMSA_id:200710 DQ522945.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-33 prokMSA_id:536937 NR_028225.1 Methanogenium marinum str. AK-1; DSM 15558 1.3.6.2.4.5 g__Methanoplanus 33 seqs 1.3.6.2.4.5.1 Unclassified 28 seqs 1.3.6.2.4.5.1.166 OTU 28 seqs prokMSA_id:50770 AB034182.1 rumen clone Hole9 prokMSA_id:95411 AY196679.1 Methanomicrobium mobile prokMSA_id:100163 AJ606400.1 with rumen protozoan Ophryoscolex caudatum clone 12 prokMSA_id:100944 AJ606405.1 with rumen protozoan Metadinium medium clone 05 prokMSA_id:101102 AJ606406.1 with rumen protozoan Metadinium medium clone 12 prokMSA_id:101435 AJ606408.1 with rumen protozoan Metadinium medium clone 19 prokMSA_id:101601 AJ606409.1 with rumen protozoan Metadinium medium clone 11 prokMSA_id:105225 AJ606410.1 with rumen protozoan Metadinium medium clone 14 prokMSA_id:105376 AJ606411.2 with rumen protozoan Ophryoscolex caudatum clone 05 prokMSA_id:150903 AY995291.1 methanogens sheep Queensland Australia rumen clone CSIRO-QC03 prokMSA_id:151789 AY995287.1 methanogens sheep Queensland Australia rumen clone CSIRO-QB08 prokMSA_id:156188 AY995298.1 methanogens sheep Queensland Australia rumen clone CSIRO-QD07 prokMSA_id:176909 EF055530.1 methanogens rumen Jinnan cattle clone LGMJN41 prokMSA_id:191367 EF055529.1 methanogens rumen Jinnan cattle clone LGMJN40 prokMSA_id:266149 AB370246.2 Methanoplanus sp. str. MobH prokMSA_id:273944 EU360961.1 Rumen microbial manipulations mitigation methane emission and enhancement productivity dairy animals rumen clone Bubalus bubalis_1 prokMSA_id:279809 EU662688.1 Microbial -temperature sludges sludge manure pit clone T6 prokMSA_id:313970 EU487517.1 Rumen microbial manipulations mitigation methane emission and enhancement productivity dairy animals rumen liquor clone 7 prokMSA_id:335259 EU487519.1 Rumen microbial manipulations mitigation methane emission and enhancement productivity dairy animals rumen liquor clone 9 prokMSA_id:336471 EU487515.1 Rumen microbial manipulations mitigation methane emission and enhancement productivity dairy animals rumen liquor clone 4 prokMSA_id:339431 EU487518.1 Rumen microbial manipulations mitigation methane emission and enhancement productivity dairy animals rumen liquor clone 8 prokMSA_id:352019 EU487520.1 Rumen microbial manipulations mitigation methane emission and enhancement productivity dairy animals rumen liquor clone 10 prokMSA_id:353065 EU487514.1 Rumen microbial manipulations mitigation methane emission and enhancement productivity dairy animals rumen liquor clone 3 prokMSA_id:356032 EU487516.1 Rumen microbial manipulations mitigation methane emission and enhancement productivity dairy animals rumen liquor clone 6 prokMSA_id:522869 AB546259.1 Methanoplanus limicola str. Mic8c07 prokMSA_id:557845 EU420694.1 Archaeal and Kao-Mei Wetland clone KM07-Da-3 prokMSA_id:560306 EU420692.1 Archaeal and Kao-Mei Wetland clone KM07-Da-1 prokMSA_id:575365 AB370248.1 Methanoplanus endosymbiosus str. DSM 3599 1.3.6.2.4.5.2 s__Methanoplanus petrolearius 5 seqs 1.3.6.2.4.5.2.167 OTU 5 seqs prokMSA_id:260 U76631.1 Methanoplanus petrolearius str. SEBR 4847 prokMSA_id:96343 AY196681.1 Methanoplanus petrolearius prokMSA_id:98537 AY196678.1 Methanolacinia paynteri str. G2000 prokMSA_id:139863 AB236050.1 Archaeal anaerobic marine sediment clone KO-Eth prokMSA_id:554894 NR_028240.1 Methanoplanus petrolearius str. SEBR 4847; DSM 11571 1.3.6.2.5 f__Methanospirillaceae 29 seqs 1.3.6.2.5.1 Unclassified 4 seqs 1.3.6.2.5.1.168 OTU 4 seqs prokMSA_id:139919 AB236101.1 Archaeal anaerobic lotus field sediment clone LF-Eth-B prokMSA_id:140312 AB236087.1 Archaeal mesophilic anaerobic granular sludge clone MP-Eth prokMSA_id:144121 AB244307.1 Microbial mesophilic chemostat cultivation long-chain fatty acids-degrading methanogenic consortium clone LCFA-A03 prokMSA_id:266074 EU591666.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MCSArc_A10 1.3.6.2.5.2 g__Methanospirillum 25 seqs 1.3.6.2.5.2.1 Unclassified 12 seqs 1.3.6.2.5.2.1.169 OTU 12 seqs prokMSA_id:97855 AY196683.1 Methanospirillum hungatei JF-1 str. JF1 prokMSA_id:103104 AJ576220.1 landfill leachate clone GZK26 prokMSA_id:139196 AB233300.1 Arcaheal methanogenic sludges anaerobic digested sludge clone ND-2 prokMSA_id:270073 EU591673.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MCSArc_G6 prokMSA_id:270421 EU591660.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MTSArc_B2 prokMSA_id:303802 EU888808.1 Decreased activity stable microbial propionate-fed without supplied tungsten molybdenum and selenium UASB reactor clone A10 prokMSA_id:313458 EU888814.1 Decreased activity stable microbial propionate-fed without supplied tungsten molybdenum and selenium UASB reactor clone A09 prokMSA_id:326676 EU888809.1 Decreased activity stable microbial propionate-fed without supplied tungsten molybdenum and selenium UASB reactor clone A05 prokMSA_id:336099 EU888810.1 Decreased activity stable microbial propionate-fed without supplied tungsten molybdenum and selenium UASB reactor clone A07 prokMSA_id:336775 FJ164110.1 Key organisms toluene-degrading -temperature toluene degrading methanogenic consortium clone OTU-MEL-j prokMSA_id:545774 AB517987.1 Methanospirillum hungatei str. NBRC 100397 prokMSA_id:547833 CU916101.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone 1.3.6.2.5.2.2 s__Methanospirillum hungatei 13 seqs 1.3.6.2.5.2.2.170 OTU 13 seqs prokMSA_id:336 M60880.1 Methanospirillum hungatei prokMSA_id:141131 AALU01000080.1 Methanospirillum hungatei str. JF-1 prokMSA_id:142524 NZ_AALU01000080.1 Methanospirillum hungatei str. JF-1 prokMSA_id:144451 NZ_AALU01000001.1 Methanospirillum hungatei str. JF-1 prokMSA_id:144612 AALU01000001.1 Methanospirillum hungatei str. JF-1 prokMSA_id:152454 NC_007796.1 Methanospirillum hungatei str. JF-1 prokMSA_id:152455 NC_007796.1 Methanospirillum hungatei str. JF-1 prokMSA_id:152456 NC_007796.1 Methanospirillum hungatei str. JF-1 prokMSA_id:152457 NC_007796.1 Methanospirillum hungatei str. JF-1 prokMSA_id:156912 CP000254.1 Methanospirillum hungatei str. JF-1 prokMSA_id:156913 CP000254.1 Methanospirillum hungatei str. JF-1 prokMSA_id:156914 CP000254.1 Methanospirillum hungatei str. JF-1 prokMSA_id:156915 CP000254.1 Methanospirillum hungatei str. JF-1 1.3.6.3 o__Methanosarcinales 1055 seqs 1.3.6.3.1 Unclassified 127 seqs 1.3.6.3.1.171 OTU 127 seqs prokMSA_id:35354 AF419644.1 Guaymas Basin hydrothermal sediment clone C1_R048 prokMSA_id:36504 AF354140.1 marine sediment clone Eel-36a2B9 prokMSA_id:41219 AF354142.1 marine sediment clone SB-17a1D3 prokMSA_id:68323 AF356642.1 Guaymas Basin clone G72_C6 prokMSA_id:69806 AF419647.1 Guaymas Basin hydrothermal sediment clone CS_R012 prokMSA_id:69820 AF354128.1 marine sediment clone Eel-36a2A4 prokMSA_id:69934 AF354130.1 marine sediment clone SB-24a1B11 prokMSA_id:70991 AF354129.1 marine sediment clone Eel-36a2A1 prokMSA_id:72394 AF354141.1 marine sediment clone SB-17a1B11 prokMSA_id:72991 AF354135.1 marine methane seep clone 1387 prokMSA_id:73069 AF419635.1 Guaymas Basin hydrothermal sediment clone C1_R004 prokMSA_id:73643 AF354138.1 marine sediment clone SB-24a1C12 prokMSA_id:73952 AF354134.1 marine sediment clone SB-24a1F10 prokMSA_id:74281 AF354133.1 marine sediment clone Eel-36a2A5 prokMSA_id:74364 AF419638.1 Guaymas Basin hydrothermal sediment clone C1_R019 prokMSA_id:98982 AJ578118.1 marine sediments above gas hydrate clone HydBeg22 prokMSA_id:101452 AY714826.1 Eel River sediment clone GZfos18C8 prokMSA_id:101882 AY714841.1 Eel River sediment clone GZfos26E7 prokMSA_id:104072 AJ578128.1 microbial mat clone BS-K-H6 prokMSA_id:106736 AJ578098.1 marine sediments above gas hydrate clone HydBeg05 prokMSA_id:107496 AJ578115.1 marine sediments above gas hydrate clone HydBeg125 prokMSA_id:107818 AY592554.1 deep-sea mud volcano clone Napoli-4A-07; BC07-4A-07 prokMSA_id:128060 DQ084449.1 Kazan mud volcano sediments in east Mediterranean Sea clone AN07BC1_15cmbsf_157A prokMSA_id:130452 DQ084450.1 Kazan mud volcano sediments in east Mediterranean Sea clone AN07BC1_15cmbsf_162A prokMSA_id:130718 DQ084452.1 Kazan mud volcano sediments in east Mediterranean Sea clone AN07BC1_20cmbsf_154A prokMSA_id:136403 DQ084451.1 fingerprinting methanogens eastern volcanoes Kazan mud volcano sediments east Mediterranean Sea clone AN07BC1_20cmbsf_153A prokMSA_id:137592 AY835418.2 hydrothermal sediment clone 1E10 prokMSA_id:137909 AY835420.2 Methanogen Evidenced Methyl Coenzyme M Reductase (mcrA) Genes Hydrothermal Sediments Guaymas Basin hydrothermal sediment clone 7A08 prokMSA_id:138173 AY835419.2 Methanogen Evidenced Methyl Coenzyme M Reductase (mcrA) Genes Hydrothermal Sediments Guaymas Basin hydrothermal sediment clone 4A08 prokMSA_id:138805 AJ890142.1 genomes archaea mediating anaerobic oxidation methane marine sediments above gas hydrate clone fos0626f11 prokMSA_id:139374 AJ890141.1 genomes archaea mediating anaerobic oxidation methane marine sediments above gas hydrate clone fos0629b6 prokMSA_id:142512 CR937009.1 genomes archaea mediating anaerobic oxidation methane fosmid library sediment above gas hydrates Hydrate Ridge clone fos0644c1 prokMSA_id:143846 CR937012.1 genomes archaea mediating anaerobic oxidation methane fosmid library sediment above gas hydrates Hydrate Ridge clone fos0642g6 prokMSA_id:152374 AB252423.1 Microbial extremely CO2 rich deep-sea sediment marine sediments Yonaguni Knoll IV hydrothermal field southern Okinawa Trough clone OT-A14.07 prokMSA_id:154061 AB252424.1 Microbial extremely CO2 rich deep-sea sediment Marine sediments Yonaguni Knoll IV hydrothermal field southern Okinawa Trough clone OT-A17.11 prokMSA_id:157389 DQ058812.1 Cultivation methanogens shal sediments Hydrate Ridge Oregon marine sediment clone HR-CF-012 prokMSA_id:157956 DQ004662.1 Microbial Reduce Methane Efflux Mud Volcano Sediments Gulf Cadiz marine hydrocarbon seep sediment clone CAVMV300A948 prokMSA_id:158920 DQ058815.1 Cultivation methanogens shal sediments Hydrate Ridge Oregon marine sediment clone HR-CF-015 prokMSA_id:159025 DQ004668.1 Microbial Reduce Methane Efflux Mud Volcano Sediments Gulf Cadiz marine hydrocarbon seep sediment clone CAVMV301A975 prokMSA_id:160386 DQ521784.1 Anaerobic Methane Oxidizing ANME-1b Archaea Hypersaline Sediments Gulf Mexico sediments clone SMI1-GC205-ArcRNA122 prokMSA_id:160568 DQ521782.1 Anaerobic Methane Oxidizing ANME-1b Archaea Hypersaline Sediments Gulf Mexico sediments clone SMI1-GC205-Arc66 prokMSA_id:165061 DQ787474.1 oil-producing water isolate ZC-1methanogenic str. ZC-1 prokMSA_id:181000 AB260054.1 Microbial black exposed hot ridge flank crustal fluids Black rust formation on borehole observatory CORK 1026B clone CORK.A04 prokMSA_id:193607 AB260055.1 Microbial black exposed hot ridge flank crustal fluids Black rust formation on borehole observatory CORK 1026B clone CORK.A41 prokMSA_id:200699 DQ522915.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-mid-10 prokMSA_id:202077 DQ522907.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-deep-13 prokMSA_id:202936 DQ640144.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-mid-22 prokMSA_id:203143 DQ640143.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-deep-14 prokMSA_id:209322 AB294257.1 Microbial structure deep coal seem groundwater stream clone SWA01 prokMSA_id:241384 EU155958.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_1E prokMSA_id:242876 EU155918.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_B11G prokMSA_id:243197 EU155957.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B10B prokMSA_id:252377 AB329824.1 Microbial southern Mariana trough hydrothermal deposits clone YS18As90 prokMSA_id:279734 EF687605.1 Biogeochemistry iron- and sulfur-precipitating microbial mats (Nile Mediterranean) sediment underneath iron-oxidizing mat Chefren mud volcano Nile Deep Sea Fan Eastern Mediterranean clone 113A26 prokMSA_id:281336 EF687607.1 Biogeochemistry iron- and sulfur-precipitating microbial mats (Nile Mediterranean) sediment underneath iron-oxidizing mat Chefren mud volcano Nile Deep Sea Fan Eastern Mediterranean clone 113A28 prokMSA_id:282054 EF687613.1 Biogeochemistry iron- and sulfur-precipitating microbial mats (Nile Mediterranean) sediment underneath iron-oxidizing mat Chefren mud volcano Nile Deep Sea Fan Eastern Mediterranean clone 113A34 prokMSA_id:282351 EF687612.1 Biogeochemistry iron- and sulfur-precipitating microbial mats (Nile Mediterranean) sediment underneath iron-oxidizing mat Chefren mud volcano Nile Deep Sea Fan Eastern Mediterranean clone 113A33 prokMSA_id:283999 EF687588.1 Biogeochemistry iron- and sulfur-precipitating microbial mats (Nile Mediterranean) sediment underneath sulfide-oxidizing mat Chefren mud volcano Nile Deep Sea Fan Eastern Mediterranean clone 104A86 prokMSA_id:287665 AM745237.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch64 prokMSA_id:289386 AM745178.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Arch53 prokMSA_id:289920 AM745253.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch53 prokMSA_id:290903 AM745252.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch51 prokMSA_id:291717 AM745257.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch71 prokMSA_id:293249 AM745250.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch95 prokMSA_id:294148 AM746104.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch38 prokMSA_id:294472 AM746090.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch15 prokMSA_id:296935 AM745228.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch24 prokMSA_id:297230 AM746094.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch41 prokMSA_id:297624 AM745181.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Arch61 prokMSA_id:297886 AM745170.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Arch73 prokMSA_id:301423 AM745238.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch65 prokMSA_id:302651 AM745229.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch26 prokMSA_id:303002 AM745233.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch45 prokMSA_id:304104 FM179917.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone a34 prokMSA_id:306454 AB461390.1 survey anaerobic methane-oxidizing archaea terrestrial habitats deep-sea methane seep sediment clone ANME2aPC prokMSA_id:312507 FM179816.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch40 prokMSA_id:315023 FM179861.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch11 prokMSA_id:321418 FM179849.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch35 prokMSA_id:323871 FM179894.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Gullfaks_a189 prokMSA_id:326044 AB461391.1 survey anaerobic methane-oxidizing archaea terrestrial habitats deep-sea methane seep sediment clone ANME2bPC prokMSA_id:329602 AB461392.1 survey anaerobic methane-oxidizing archaea terrestrial habitats deep-sea methane seep sediment clone ANME2cPC prokMSA_id:336220 FM179864.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch32 prokMSA_id:336596 FM179895.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Gullfaks_a32 prokMSA_id:340235 FM179890.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch10 prokMSA_id:341553 FM179863.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch24 prokMSA_id:351382 FM179835.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch82 prokMSA_id:352053 FM179866.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch141 prokMSA_id:355812 FM179865.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch123 prokMSA_id:453468 FJ982704.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMPUFLSS70m_1 prokMSA_id:456435 FJ982666.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone PASLSS0.5m_1 prokMSA_id:509327 FJ712386.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-25-A11 prokMSA_id:510869 FJ555676.1 Microbial aspects capable sulfate reduction anaerobic methane oxidation submersed membrane bioreactor enrichment Eckernforde Bay sediment German Baltic Sea clone AOM-Clone-C3 prokMSA_id:512968 FJ712398.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-30-A16 prokMSA_id:513936 FJ555674.1 Microbial aspects capable sulfate reduction anaerobic methane oxidation submersed membrane bioreactor enrichment Eckernforde Bay sediment German Baltic Sea clone AOM-Clone-A11 prokMSA_id:516270 FJ712387.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-25-A18 prokMSA_id:516665 FJ712364.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-0-A40 prokMSA_id:517847 FJ712362.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-0-A18 prokMSA_id:518439 FJ712367.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-5-A4 prokMSA_id:520051 FJ712389.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-25-A36 prokMSA_id:521223 FJ712369.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-5-A10 prokMSA_id:522442 FJ712395.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-30-A7 prokMSA_id:527668 FJ712363.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-0-A25 prokMSA_id:529338 FJ712377.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-10-A4 prokMSA_id:530185 FJ712375.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-10-A1 prokMSA_id:530720 FJ712376.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-10-A2 prokMSA_id:532287 FJ712371.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-5-A21 prokMSA_id:533814 FJ907179.1 Enrichment anoxic methane utilizing denitrification (AnMUD) microorganisms mixed inoculum bioreactor ing sediment fresh water lake anaerobic digester and return activated sludge clone LCB_A1C7 prokMSA_id:534062 AM229242.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-84-251A prokMSA_id:534217 FJ555687.1 Microbial aspects capable sulfate reduction anaerobic methane oxidation submersed membrane bioreactor enrichment Eckernforde Bay sediment German Baltic Sea clone AOM-Clone-F9 prokMSA_id:535918 AM229250.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-83-640A prokMSA_id:536777 GU190986.1 Spatial structure and activity sedimentary microbial underlying Beggiatoa spp. mat Gulf Mexico hydrocarbon seep marine sediment; 900 m water 0-24 cm sediment depth clone Edge0arc44 prokMSA_id:541493 FJ555675.1 Microbial aspects capable sulfate reduction anaerobic methane oxidation submersed membrane bioreactor enrichment Eckernforde Bay sediment German Baltic Sea clone AOM-Clone-A2 prokMSA_id:546440 FJ555684.1 Microbial aspects capable sulfate reduction anaerobic methane oxidation submersed membrane bioreactor enrichment Eckernforde Bay sediment German Baltic Sea clone AOM-Clone-B6 prokMSA_id:547137 AM229254.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-84-213A prokMSA_id:555929 FN429785.1 Biogeochemistry -activity cold seep Larsen B area western Weddell Sea Antarctica marine sediments (1.1 mbsf) 850 m water depth clone ANTXXIII_706-4_Arch67 prokMSA_id:563839 FJ649528.1 Prokaryotic layer S1 Amsterdam Mud Volcano sapropel sediment East Mediterranean Sea clone AMSMV-S1-A42 prokMSA_id:570724 AM229230.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) pure gas hydrate clone HydGH40-Arch201 prokMSA_id:580315 AM229226.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) pure gas hydrate clone HydGH40-Arch247 prokMSA_id:582277 FJ555678.1 Microbial aspects capable sulfate reduction anaerobic methane oxidation submersed membrane bioreactor enrichment Eckernforde Bay sediment German Baltic Sea clone AOM-Clone-D10 prokMSA_id:585298 FJ555681.1 Microbial aspects capable sulfate reduction anaerobic methane oxidation submersed membrane bioreactor enrichment Eckernforde Bay sediment German Baltic Sea clone AOM-Clone-G10 prokMSA_id:586640 AM229244.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-84-86A prokMSA_id:587992 AM229240.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-83-548A prokMSA_id:588212 FJ555679.1 Microbial aspects capable sulfate reduction anaerobic methane oxidation submersed membrane bioreactor enrichment Eckernforde Bay sediment German Baltic Sea clone AOM-Clone-E10 prokMSA_id:588727 AM229227.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) pure gas hydrate clone HydGH40-Arch271 prokMSA_id:589464 AM404402.1 Hydrocarbon-fueled sulfate reduction can sustain long-lived tubeworm aggregations cold seeps Gulf Mexico marine sediment clone GoM_SMBush4593_Arch6 prokMSA_id:590970 FN429776.1 Biogeochemistry -activity cold seep Larsen B area western Weddell Sea Antarctica marine sediments (1.1 mbsf) 850 m water depth clone ANTXXIII_706-4_Arch213 prokMSA_id:593813 AB525486.1 Segregated ANME-1 and -2 cold-seep marine sediments deep-sea methane seep sediment off Joetsu Japan Sea clone UT06_10_52A_04 1.3.6.3.2 f__Methanosaetaceae 448 seqs 1.3.6.3.2.1 g__Methanosaeta 448 seqs 1.3.6.3.2.1.1 Unclassified 440 seqs 1.3.6.3.2.1.1.172 OTU 440 seqs prokMSA_id:524 X16932.1 Methanosaeta concilii prokMSA_id:525 X51423.1 Methanosaeta concilii str. opfikon prokMSA_id:532 AF050611.1 contaminated aquifer clone WCHD3-03 prokMSA_id:538 AJ009508.1 TCB bioreactor clone SJC-11b prokMSA_id:539 AJ009509.1 TCB bioreactor clone SJC-125a prokMSA_id:19676 AF229774.1 terephthalate-degrading consortium clone TA01 prokMSA_id:22948 AF423188.1 Toluene-degrading methanogenic consortium clone M2 consortium prokMSA_id:25452 AF424772.1 municipal wastewater sludge clone 120A-4 prokMSA_id:27475 AJ133791.1 hydrocarbon enrichment clone A1 prokMSA_id:32447 AF424767.1 municipal wastewater sludge clone 61-2 prokMSA_id:49668 AF229777.1 terephthalate-degrading consortium clone TA04 prokMSA_id:62894 AB077211.1 oil-contaminated groundwater clone KuA1 prokMSA_id:67140 AB084242.1 solid waste landfill clone LCC prokMSA_id:86454 AY251025.1 freshwater sediment clone 15ar14 prokMSA_id:99123 AJ576230.1 landfill leachate clone GZK51 prokMSA_id:102040 AB092914.2 acetate-degrading methanogenic consortium clone EA02 prokMSA_id:102505 AY693812.1 anaerobic sludge clone ARC20 prokMSA_id:103069 AY426474.1 full-scale anaerobic UASB bioreactor treating paper mill wastewater clone 1A3 prokMSA_id:103247 AJ576221.1 landfill leachate clone GZK31 prokMSA_id:103788 AY426479.1 full-scale anaerobic UASB bioreactor treating paper mill wastewater clone 1E4 prokMSA_id:103958 AY692053.1 UASB reactor clone I1 prokMSA_id:104108 AY692054.1 UASB reactor clone I2 prokMSA_id:104116 AJ576227.1 landfill leachate clone GZK39 prokMSA_id:104261 AY692055.1 UASB reactor clone M1 prokMSA_id:104424 AY692056.1 UASB reactor clone M6 prokMSA_id:104576 AY692057.1 UASB reactor clone M30 prokMSA_id:106557 AB175353.1 mesophilic anaerobic BSA digester clone BSA2A-08 prokMSA_id:106713 AB175354.1 mesophilic anaerobic BSA digester clone BSA2A-09 prokMSA_id:107090 AJ576211.1 landfill leachate clone GZK10 prokMSA_id:107223 AY667272.1 TCE-dechlorinating groundwater clone TANA2 prokMSA_id:108441 AY586394.1 fatty acid-degrading consortium clone FA-PA5 prokMSA_id:108521 AY570656.1 biodegraded Canadian oil reservoir clone PL-35A3 prokMSA_id:108528 AY570662.1 biodegraded Canadian oil reservoir clone PL-9A10 prokMSA_id:108558 AY570685.1 biodegraded Canadian oil reservoir clone PL-39A4 prokMSA_id:108821 AY817738.1 Methanosaeta sp. str. 8Ac prokMSA_id:114793 AY970347.1 Methanosaeta sp. str. 6Ac prokMSA_id:138610 AB232797.1 Microbial mesophilic chemostat cultivation propionate-degrading methanogenic consortium clone PMA06 prokMSA_id:138706 AB233292.1 Arcaheal methanogenic sludges UASB granular sludge clone CG-1 prokMSA_id:138727 AB232791.1 Microbial mesophilic chemostat cultivation propionate-degrading methanogenic consortium clone PLA06 prokMSA_id:138808 AB233299.1 Arcaheal methanogenic sludges anaerobic digested sludge clone ND-1 prokMSA_id:138935 AB233295.1 Arcaheal methanogenic sludges UASB granular sludge clone CG-5 prokMSA_id:140385 AB236076.1 Archaeal anaerobic river sediment clone AR-Pro-B prokMSA_id:140452 AB236094.1 Archaeal mesophilic anaerobic granular sludge clone MP-Pro prokMSA_id:143930 AB244305.1 Microbial mesophilic chemostat cultivation long-chain fatty acids-degrading methanogenic consortium clone LCFA-A01 prokMSA_id:144837 AB244306.1 Microbial mesophilic chemostat cultivation long-chain fatty acids-degrading methanogenic consortium clone LCFA-A02 prokMSA_id:145035 AB244744.1 Microbial Mesophilic Anaerobic Glycerol Degradation Process Chemostat Cultivation mesophilic anaerobic glycerol-fed reactor clone GLY2A02 prokMSA_id:145819 AB248606.1 mesophilic anaerobic butyrate-degrading reactor clone BLA03 prokMSA_id:146195 AB248615.1 mesophilic anaerobic butyrate-degrading reactor clone BHA05 prokMSA_id:146490 AB248604.1 mesophilic anaerobic butyrate-degrading reactor clone BLA01 prokMSA_id:147254 AB248614.1 mesophilic anaerobic butyrate-degrading reactor clone BHA04 prokMSA_id:148701 AB248605.1 mesophilic anaerobic butyrate-degrading reactor clone BLA02 prokMSA_id:150052 AB248613.1 mesophilic anaerobic butyrate-degrading reactor clone BHA03 prokMSA_id:157890 DQ478742.1 UASB reactor treating brewery wastewater clone CLONG46 prokMSA_id:164992 AB266904.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone HgtA21fl prokMSA_id:167292 AB266890.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone SmA85fl prokMSA_id:168796 AB266894.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone SwA76fl prokMSA_id:171558 AB266919.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone DtA103fl prokMSA_id:172441 AB266892.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone SwA12fl prokMSA_id:174284 EF198052.1 Microbial structures mesophilic and methanogenic consortia anaerobic thermophilic phenol-degrading enrichment clone TP123 prokMSA_id:187194 DQ841239.1 Microbial deep subsurface gas- water Minami-kanto Japan natural gas field clone MOB7-4 prokMSA_id:192188 DQ841240.1 Microbial deep subsurface gas- water Minami-kanto Japan natural gas field clone MOB7-5 prokMSA_id:193585 EF198049.1 Microbial structures mesophilic and methanogenic consortia anaerobic thermophilic phenol-degrading enrichment clone TP103 prokMSA_id:197474 EF198050.1 Microbial structures mesophilic and methanogenic consortia anaerobic thermophilic phenol-degrading enrichment clone TP114 prokMSA_id:198150 EF198035.1 Microbial structures and thermophilic methanogenic consortia anaerobic mesophilic phenol-degrading enrichment clone MP104 prokMSA_id:202347 DQ522924.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-mid-28 prokMSA_id:203472 AB248611.1 mesophilic anaerobic butyrate-degrading reactor clone BHA01 prokMSA_id:206281 DQ339719.1 assessment complex microbial degrading long chain fatty acids (LCFA) methanogenic bioreactors anaerobic sludge submitted extended contact LCFA clone lcfa_A06 prokMSA_id:214142 DQ339718.1 assessment complex microbial degrading long chain fatty acids (LCFA) methanogenic bioreactors anaerobic sludge submitted extended contact LCFA clone lcfa_A03 prokMSA_id:236471 EU155900.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_4B prokMSA_id:236481 EU155909.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_21D prokMSA_id:236606 EU155950.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_4E prokMSA_id:237084 EU155901.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_11C prokMSA_id:238556 EU155949.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B3D prokMSA_id:238576 EU155945.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B11C prokMSA_id:239685 AB329664.1 Layered structure archaeal and their situ activities anaerobic granules UASB granule clone UASB29 prokMSA_id:240284 EU155946.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B12H prokMSA_id:240296 EU155905.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_6E prokMSA_id:244052 EU155904.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_1E prokMSA_id:244302 AB329663.1 Layered structure archaeal and their situ activities anaerobic granules UASB granule clone UASB26 prokMSA_id:245897 EU155948.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B3B prokMSA_id:245902 EU155903.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_B3E prokMSA_id:246936 EU155910.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_11F prokMSA_id:248379 EU155902.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_B12D prokMSA_id:251036 EU155906.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_B8F prokMSA_id:251788 EU155908.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_7G prokMSA_id:252785 EU155947.2 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_2E prokMSA_id:253340 EU155907.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_7F prokMSA_id:257892 EU155911.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_2B prokMSA_id:266263 EU591674.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MCSArc_H3 prokMSA_id:270022 EU591661.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MTSArc_E11 prokMSA_id:270743 EU591663.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MTSArc_G11 prokMSA_id:272422 AB434763.1 Treatment -strength wastewater anaerobic down-f hanging sponge (AnDHS) reactor temperature methanogenic sludge clone AnDHS-A1 prokMSA_id:272691 EU591670.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MCSArc_B8 prokMSA_id:273344 AB434765.1 Treatment -strength wastewater anaerobic down-f hanging sponge (AnDHS) reactor temperature methanogenic sludge clone AnDHS-A3 prokMSA_id:274355 AB434767.1 Treatment -strength wastewater anaerobic down-f hanging sponge (AnDHS) reactor temperature methanogenic sludge clone AnDHS-A5 prokMSA_id:274532 EU591671.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems methanogenic reactor clone MCSArc_C3 prokMSA_id:285026 EU662681.1 Microbial -temperature sludges sludge manure pit clone S10 prokMSA_id:285052 EU662697.1 Microbial -temperature sludges sludge manure pit clone T65 prokMSA_id:287185 EU662669.1 Microbial -temperature sludges sludge manure pit clone P17 prokMSA_id:289998 AM745179.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Arch55 prokMSA_id:299322 AM746093.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM140_Arch23 prokMSA_id:300825 AM745249.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch55 prokMSA_id:305584 EU888812.1 Decreased activity stable microbial propionate-fed without supplied tungsten molybdenum and selenium UASB reactor clone A12 prokMSA_id:305641 EU888804.1 Decreased activity stable microbial propionate-fed without supplied tungsten molybdenum and selenium UASB reactor clone A01 prokMSA_id:309186 EU888806.1 Decreased activity stable microbial propionate-fed without supplied tungsten molybdenum and selenium UASB reactor clone A08 prokMSA_id:312562 FJ164111.1 Key organisms toluene-degrading -temperature toluene degrading methanogenic consortium clone OTU-MEL-k prokMSA_id:316558 FJ167431.1 microbiology granular sludge under autotrophic mixotrophic and heterotrophic denitrification conditions denitrifying bioreactor clone R1A-3 prokMSA_id:318556 EU910626.1 Eukaryal and Archaeal Middle Island sinkhole (Lake Huron USA) sediment clone G19 prokMSA_id:327051 FJ167437.1 microbiology granular sludge under autotrophic mixotrophic and heterotrophic denitrification conditions denitrifying bioreactor clone R3A-1 prokMSA_id:328608 FJ167429.1 microbiology granular sludge under autotrophic mixotrophic and heterotrophic denitrification conditions denitrifying bioreactor clone R1A-1 prokMSA_id:335614 FJ167430.1 microbiology granular sludge under autotrophic mixotrophic and heterotrophic denitrification conditions denitrifying bioreactor clone R1A-2 prokMSA_id:348211 FJ167433.1 microbiology granular sludge under autotrophic mixotrophic and heterotrophic denitrification conditions denitrifying bioreactor clone R2A-1 prokMSA_id:348394 EU910619.1 Eukaryal and Archaeal Middle Island sinkhole (Lake Huron USA) sediment clone F11 prokMSA_id:354576 EU888805.1 Decreased activity stable microbial propionate-fed without supplied tungsten molybdenum and selenium UASB reactor clone A06 prokMSA_id:355114 EU888811.1 Decreased activity stable microbial propionate-fed without supplied tungsten molybdenum and selenium UASB reactor clone A03 prokMSA_id:359790 EU857625.1 Isolation methanogenic Nisargruna Biogas Plant clone prokMSA_id:362941 EU857630.1 Isolation methanogenic Nisargruna Biogas Plant clone prokMSA_id:367218 EU857629.1 Isolation methanogenic Nisargruna Biogas Plant clone prokMSA_id:368815 EU857632.1 Isolation methanogenic Nisargruna Biogas Plant clone prokMSA_id:370438 FJ971746.1 microbial autrotrophic denitrification granular sludge clone R2-A1 prokMSA_id:450770 FJ971742.1 microbial autrotrophic denitrification granular sludge clone E-A1 prokMSA_id:454121 FJ971745.1 microbial autrotrophic denitrification granular sludge clone R1-A1 prokMSA_id:516882 GU135459.1 archaeal Lake Pavin sediment (1 cm) clone Pav-sed-101 prokMSA_id:517451 GU135461.1 archaeal Lake Pavin sediment (11 cm) clone Pav-sed-103 prokMSA_id:524013 GU135460.1 archaeal Lake Pavin sediment (1 cm) clone Pav-sed-102 prokMSA_id:527005 FJ712391.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-25-A58 prokMSA_id:528681 FJ712397.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-30-A14 prokMSA_id:530780 FJ712370.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-5-A12 prokMSA_id:532604 CU916061.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533039 CU916755.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533144 AB479409.1 Isolation Methanomicrobiales methanogen sludge methanogenic propionate-degradation enrichment clone SMS-T-Pro-5 prokMSA_id:533407 CU916821.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533411 CU916607.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533482 CU916020.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533762 CU916634.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534218 CU915920.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534267 CU916559.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534278 CU916510.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534353 CU915835.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534384 CU916059.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534512 CU916851.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534538 CU915853.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534947 CU916461.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535093 CU916394.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535308 CU916375.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535376 CU917326.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535598 CU917311.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535855 CU916684.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535908 CU917406.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536175 CU916283.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536327 CU916641.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536344 AB447817.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_045 prokMSA_id:536374 CU916192.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536377 CU916252.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536413 CU915980.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536736 CU916695.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537056 CU915875.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537323 CU916581.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537453 AB447850.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_014 prokMSA_id:537500 AB447860.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_059 prokMSA_id:537632 CU917165.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537663 CU916686.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538205 CU916284.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538246 CU916555.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538275 CU916180.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538577 CU915839.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538701 AB447873.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_087 prokMSA_id:538854 CU916627.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539081 CU917099.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539135 CU916794.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539174 CU916455.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539445 CU915917.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539726 CU916265.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540044 CU916447.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540273 CU916692.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540380 CU916331.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540457 CU916721.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540647 CU916091.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540927 CU917268.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540981 CU916720.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540984 CU916790.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540986 CU916239.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541013 CU917133.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541065 CU916591.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541239 AB447866.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_077 prokMSA_id:541281 CU916250.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541662 CU916502.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541776 CU916221.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541801 CU916475.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542073 CU917371.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542204 CU916923.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542260 CU916586.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542531 CU916279.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542769 CU916064.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543202 CU915898.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543329 AB494241.1 microbial anaerobic digester sludge clone WA20 prokMSA_id:543542 AB447846.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_005 prokMSA_id:543599 CU916661.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543658 CU917313.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543706 CU916445.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543909 CU916040.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544185 CU916856.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544186 CU916097.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544187 CU916696.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544267 CU916199.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544390 CU917387.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544450 CU916663.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544570 CU917320.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544988 AB447806.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0226_009 prokMSA_id:545026 CU916228.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545030 CU915850.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545178 CU916504.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545230 CU916472.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545270 CU916247.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545333 CU916540.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545556 CU916487.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545581 AB447788.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0220_080 prokMSA_id:545590 CU916274.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545694 FJ638510.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCL50a_01_01 prokMSA_id:545717 CU916190.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545821 CU916615.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546112 CU916315.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546508 CU916469.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546551 CU916223.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546703 CU916309.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546818 CU916419.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546839 CU916436.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547020 CU917061.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547108 CU916400.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547297 CU916266.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547424 CU916809.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547635 CU916570.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548130 AB447790.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0220_082 prokMSA_id:548143 CU916981.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548365 CU916304.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548527 CU916880.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548728 CU917209.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548739 CU916031.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548951 CU915859.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549062 CU916368.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549091 CU916287.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549116 CU916194.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549117 CU915987.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549306 AB447779.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0220_035 prokMSA_id:549370 CU916048.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549479 CU916200.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549518 CU915942.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549721 CU915864.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549786 CU915889.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549835 CU916698.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549873 CU916218.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550080 CU916694.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550299 CU916110.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550362 CU916769.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550535 FJ638513.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCL50a_04_38 prokMSA_id:550591 CU917146.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550823 CU916536.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:551143 CU916714.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:551534 AB447769.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0219_029 prokMSA_id:551702 CU916014.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:551707 CU916642.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552410 CU916051.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552451 CU916549.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552631 CU917428.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552699 CU916545.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552795 CU916946.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552834 CU916272.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553057 CU916234.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553088 CU917077.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553693 CU917337.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553941 CU915955.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554038 AB447765.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0219_012 prokMSA_id:554039 CU916454.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554200 CU916500.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554283 CU916029.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554454 CU916224.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554488 CU916670.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554510 AB447789.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0220_081 prokMSA_id:554693 CU915885.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554938 CU916588.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555136 CU916358.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555287 CU916270.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555353 CU917060.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555508 FJ705126.1 Study prokaryotic selected niches Western Ghats India WCS sediment clone ACWCSP1C6 prokMSA_id:555554 CU916507.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555693 CU916541.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555734 CU916382.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555735 CU915869.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555944 CU915847.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555968 CU916539.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556014 CU916600.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556016 CU916323.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556097 CU916653.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556197 FJ638501.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCLunma_03_03 prokMSA_id:556274 CU915909.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556311 CU916483.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556705 CU916572.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556926 CU916393.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556945 CU916633.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556953 CU916378.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:556991 CU917167.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557487 CU916299.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557746 CU916618.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557775 CU916531.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557837 CU916236.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557909 CU917361.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557955 CU916312.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558130 CU916267.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558208 CU915854.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558347 CU916639.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558360 CU916086.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558596 CU915949.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558607 CU916518.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558651 CU917401.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558729 CU916175.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558828 CU916553.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558843 CU916697.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558866 CU916440.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559300 CU916498.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559573 AB447859.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_058 prokMSA_id:559680 FJ705109.1 Study prokaryotic selected niches Western Ghats India WCS sediment clone ACWCSP1C3 prokMSA_id:559943 CU915887.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560107 CU916300.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560460 CU916515.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560646 CU916112.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560800 CU916882.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:561121 AB447810.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0226_015 prokMSA_id:561268 CU916044.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:561276 CU916214.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:561347 CU916689.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:561472 FJ705108.1 Study prokaryotic selected niches Western Ghats India WCS sediment clone ACWCSP1B3 prokMSA_id:561630 CU916687.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:561682 CU916726.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:561738 CU916013.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:561862 CU916632.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562162 AB539924.1 Evidence syntrophic acetate oxidation coupled hydrogenotrophic methanogenesis -temperature petroleum reservoir Yabase oil field clone AR80A41 prokMSA_id:562216 CU916314.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562355 CU916016.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562508 CU916567.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562529 CU916566.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562578 CU915881.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562836 FJ638509.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCL40a_06_25 prokMSA_id:562916 AB447842.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_095 prokMSA_id:563039 CU917400.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563158 CU916527.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563325 CU916391.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563471 CU917304.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563512 CU916054.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563769 AB447843.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_001 prokMSA_id:563823 AB447871.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_083 prokMSA_id:564281 CU917039.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:564603 CU916617.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:564655 CU916215.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:564739 CU916188.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:564846 CU916340.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:564897 CU916485.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:565014 CU917259.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:565235 CU916631.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:565340 CU916595.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:565464 CU916176.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:566124 CU916076.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567002 CU916568.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567056 CU916189.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567216 CU916655.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567318 CU916197.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567322 AB447792.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0220_093 prokMSA_id:567360 CU916024.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567566 CU916351.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567568 CU916399.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567581 CU916222.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567770 CU916421.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567868 CU916420.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567950 CU916371.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:568224 CU916293.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:568240 CU916410.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:568636 CU916576.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:568790 CU917429.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:569180 CU915895.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:569423 AB447820.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_054 prokMSA_id:569615 CU917372.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:569848 CU916854.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:569901 CU916577.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:570093 AB447839.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_091 prokMSA_id:570156 CU916330.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:570323 CU916227.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:570479 AB447809.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0226_014 prokMSA_id:570703 CU917021.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:570818 CU916004.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:571403 CU916305.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:571506 CU916226.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:571605 AB447762.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0215_024 prokMSA_id:571875 CU916152.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:571973 CU916415.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:572021 AB447786.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0220_072 prokMSA_id:572647 CU916717.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:572800 CU916286.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:572804 CU916356.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573368 CU916582.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573370 AB447816.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_042 prokMSA_id:573603 AB447770.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0219_036 prokMSA_id:573714 CU916532.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573861 CU916219.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573917 CU916291.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574157 CU916573.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574231 AB479394.1 Isolation Methanomicrobiales methanogen mesophilic methanogenic granular sludge clone SMS-sludge-3 prokMSA_id:574240 CU917325.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574412 CU916683.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574572 CU916348.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574624 CU916583.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574806 CU916173.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575084 CU916574.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575300 CU916136.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575360 CU916505.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575741 CU915982.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575832 CU916260.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575860 CU917257.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575892 CU916407.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:579160 AB447776.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0219_086 prokMSA_id:579404 AB447793.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0215_052 prokMSA_id:579749 AB447861.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_063 prokMSA_id:581504 AB447855.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_031 prokMSA_id:581787 AB447780.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0220_043 prokMSA_id:581957 AB447797.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0219_018 prokMSA_id:582202 AB447833.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_085 prokMSA_id:583207 AM229252.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-83-654A prokMSA_id:583395 AB447807.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0226_012 prokMSA_id:583776 AB447798.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0219_022 prokMSA_id:584531 AB447856.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_036 prokMSA_id:584701 AB447849.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_013 prokMSA_id:584887 AB447818.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_051 prokMSA_id:587049 AB447781.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0220_047 prokMSA_id:587692 AB447879.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_094 prokMSA_id:588796 AB447813.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_032 prokMSA_id:590294 AB447834.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_086 prokMSA_id:590424 AB447840.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_093 prokMSA_id:591658 AB447875.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_089 prokMSA_id:592419 AB447864.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_071 prokMSA_id:592558 AB447761.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_0_ARC_0215_021 prokMSA_id:593197 AB447804.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0226_007 prokMSA_id:593546 AB447802.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0226_005 1.3.6.3.2.1.2 s__Methanosaeta thermophila 8 seqs 1.3.6.3.2.1.2.173 OTU 8 seqs prokMSA_id:72392 AB071701.1 Methanothrix thermophila str. PT prokMSA_id:152431 AAOR01000001.1 Methanosaeta thermophila str. PT prokMSA_id:155726 NZ_AAOR01000001.1 Methanosaeta thermophila str. PT prokMSA_id:174645 DQ867049.1 Microbial and methanogenic potential temperature water Japan natural gas field clone NAK1-a3 prokMSA_id:186782 CP000477.1 Methanosaeta thermophila str. PT prokMSA_id:186783 CP000477.1 Methanosaeta thermophila str. PT prokMSA_id:187015 NC_008553.1 Methanosaeta thermophila str. PT prokMSA_id:187016 NC_008553.1 Methanosaeta thermophila str. PT 1.3.6.3.3 f__Methanosarcinaceae 480 seqs 1.3.6.3.3.1 Unclassified 148 seqs 1.3.6.3.3.1.174 OTU 148 seqs prokMSA_id:516 AJ238002.1 Methanimicrococcus blatticola str. PA prokMSA_id:36837 AB034189.1 rumen clone 2 prokMSA_id:70903 AF354136.1 marine sediment clone Eel-36a2H11 prokMSA_id:88818 AY299516.1 carbonate hydrothermal vent chimney clone LC1022a-1 prokMSA_id:90526 AY299515.1 carbonate hydrothermal vent chimney clone LC1149a-56 prokMSA_id:95892 AY196680.1 Methanimicrococcus blatticola str. PAT prokMSA_id:100220 AJ579330.1 marine sediment clone HMMVBeg-32 prokMSA_id:105190 AJ579327.1 marine sediment clone HMMVBeg-34 prokMSA_id:105351 AJ579328.1 marine sediment clone HMMVBeg-29 prokMSA_id:105505 AJ579329.1 marine sediment clone HMMVBeg-27 prokMSA_id:109231 AJ704631.1 marine sediment clone HMMVBeg-36 prokMSA_id:109237 AJ704650.1 marine sediment clone HMMVBeg-34 prokMSA_id:109238 AJ704651.1 marine sediment clone HMMVBeg-29 prokMSA_id:109239 AJ704652.1 marine sediment clone HMMVBeg-27 prokMSA_id:109240 AJ704653.1 marine sediment clone HMMVBeg-32 prokMSA_id:142727 DQ228628.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone OUTa9 prokMSA_id:143256 CR937011.1 genomes archaea mediating anaerobic oxidation methane fosmid library sediment above gas hydrates Hydrate Ridge clone fos0625e3 prokMSA_id:164377 DQ123877.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.05 prokMSA_id:189415 DQ841237.1 Microbial deep subsurface gas- water Minami-kanto Japan natural gas field clone MOB7-2 prokMSA_id:333115 FJ224366.1 Methanosalsum zhilinae str. DSM 4017 prokMSA_id:341780 AB461393.1 survey anaerobic methane-oxidizing archaea terrestrial habitats deep-sea methane seep sediment clone ANME3PC prokMSA_id:343638 EU731583.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA03C06 prokMSA_id:509221 FJ791415.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU613 prokMSA_id:509607 FJ791487.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU547 prokMSA_id:509649 FJ791617.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU656 prokMSA_id:509866 FJ791370.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU749 prokMSA_id:509906 FJ712392.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-30-A1 prokMSA_id:509926 FJ791637.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU406 prokMSA_id:510483 FJ791573.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU549 prokMSA_id:510520 FJ791541.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU569 prokMSA_id:510702 FJ791609.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU670 prokMSA_id:510845 FJ791566.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU732 prokMSA_id:510988 FJ791424.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU579 prokMSA_id:511166 FJ791453.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU508 prokMSA_id:511207 FJ712365.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-0-A42 prokMSA_id:511383 FJ791495.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU661 prokMSA_id:511422 FJ791378.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU715 prokMSA_id:512311 FJ791393.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU550 prokMSA_id:512493 FJ791489.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU542 prokMSA_id:512502 FJ791414.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU439 prokMSA_id:512606 FJ791462.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU657 prokMSA_id:512796 FJ791631.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU744 prokMSA_id:512801 FJ791420.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU385 prokMSA_id:513045 FJ791598.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU555 prokMSA_id:513304 FJ791540.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU535 prokMSA_id:513557 FJ791634.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU597 prokMSA_id:513710 FJ712385.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-25-A6 prokMSA_id:513835 FJ791435.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU727 prokMSA_id:513889 FJ791429.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU585 prokMSA_id:517689 FJ712361.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-0-A11 prokMSA_id:519313 FJ712381.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-10-A51 prokMSA_id:532652 FJ791584.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU574 prokMSA_id:533000 FJ791504.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU565 prokMSA_id:533235 FJ791627.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU450 prokMSA_id:533503 FJ791319.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU675 prokMSA_id:533684 FJ791454.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU489 prokMSA_id:535050 FJ791339.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU505 prokMSA_id:536862 FJ791308.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU486 prokMSA_id:536980 FJ791422.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU746 prokMSA_id:537027 FJ791423.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU529 prokMSA_id:537381 FJ791444.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU614 prokMSA_id:538782 FJ791582.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU405 prokMSA_id:539580 FJ791507.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU451 prokMSA_id:540155 FJ791545.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU407 prokMSA_id:540213 FJ791560.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU479 prokMSA_id:540685 FJ791517.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU761 prokMSA_id:540686 FJ791463.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU680 prokMSA_id:540803 FJ791592.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU468 prokMSA_id:541000 FJ791386.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU704 prokMSA_id:541093 FJ791614.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU764 prokMSA_id:541200 FJ791351.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU621 prokMSA_id:541332 FJ791632.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU527 prokMSA_id:541751 FJ791310.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU683 prokMSA_id:542534 FJ791568.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU604 prokMSA_id:542963 FJ791315.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU414 prokMSA_id:543138 FJ791520.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU750 prokMSA_id:543332 FJ791633.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU588 prokMSA_id:543384 FJ791438.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU556 prokMSA_id:543757 FJ791471.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU617 prokMSA_id:544117 FJ791569.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU641 prokMSA_id:544438 FJ791625.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU465 prokMSA_id:544637 FJ791621.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU554 prokMSA_id:545010 FJ791530.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU748 prokMSA_id:545160 FJ791599.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU427 prokMSA_id:545404 FJ791425.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU481 prokMSA_id:545681 FJ791590.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU393 prokMSA_id:546223 FJ791574.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU511 prokMSA_id:546413 FJ791586.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU494 prokMSA_id:546577 FJ791449.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU503 prokMSA_id:548881 FJ791361.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU423 prokMSA_id:548916 FJ791379.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU507 prokMSA_id:550994 FJ791439.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU607 prokMSA_id:551214 FJ791442.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU631 prokMSA_id:551844 FJ791620.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU678 prokMSA_id:552231 FJ791594.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU643 prokMSA_id:552867 FJ791588.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU464 prokMSA_id:553405 FJ791610.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU759 prokMSA_id:554004 FJ791352.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU634 prokMSA_id:554934 FJ791596.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU443 prokMSA_id:556803 FJ791619.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU573 prokMSA_id:556813 FJ791436.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU400 prokMSA_id:557213 FJ791469.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU474 prokMSA_id:558669 GU190976.1 Spatial structure and activity sedimentary microbial underlying Beggiatoa spp. mat Gulf Mexico hydrocarbon seep marine sediment; 900 m water 0-24 cm sediment depth clone MatB12arc16 prokMSA_id:558962 FJ791302.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU430 prokMSA_id:559079 FJ791602.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU694 prokMSA_id:559229 AB541721.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_27 prokMSA_id:559255 FJ791559.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU562 prokMSA_id:559567 FJ791597.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU541 prokMSA_id:560214 AB541722.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_28 prokMSA_id:561209 FJ791490.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU558 prokMSA_id:561411 FJ791557.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU487 prokMSA_id:561819 FJ791497.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU397 prokMSA_id:561848 FJ791335.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU627 prokMSA_id:562041 FJ791470.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU576 prokMSA_id:562176 FJ791447.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU664 prokMSA_id:562280 FJ791485.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU673 prokMSA_id:563109 FJ791591.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU707 prokMSA_id:563366 FJ791531.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU460 prokMSA_id:563461 FJ791433.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU629 prokMSA_id:563563 FJ791628.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU567 prokMSA_id:564331 FJ791337.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU695 prokMSA_id:564459 FJ791534.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU506 prokMSA_id:564565 FJ791499.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU660 prokMSA_id:564570 FJ791333.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU672 prokMSA_id:565055 FJ791623.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU523 prokMSA_id:566371 FJ656258.1 Periodic sulfide irruptions impact microbial structure and archaeal hypersaline lake water column clone SS_WC_06 prokMSA_id:567223 FJ791466.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU632 prokMSA_id:567418 FJ791494.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU691 prokMSA_id:567931 FJ791624.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU592 prokMSA_id:568563 FJ791358.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU493 prokMSA_id:569164 FJ791399.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU611 prokMSA_id:569355 FJ791426.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU533 prokMSA_id:570135 FJ791488.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU590 prokMSA_id:570255 FJ791376.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU498 prokMSA_id:570327 FJ791366.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU544 prokMSA_id:571925 FJ791604.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU698 prokMSA_id:572035 AM229234.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-84-548A prokMSA_id:573182 FJ791455.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU497 prokMSA_id:573698 FJ791432.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU600 prokMSA_id:574854 FJ791468.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU747 prokMSA_id:575934 FJ791622.1 Unexpectedly archaeal species shift between rare and dominant over thousand year time scales carbonate chimney Lost City Hydrothermal Field clone SGXU513 prokMSA_id:576087 AB541719.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_25 prokMSA_id:578012 AB541724.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_30 prokMSA_id:580710 FJ712366.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-5-A1 prokMSA_id:582108 AB541725.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_31 prokMSA_id:584654 AB541720.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_26 prokMSA_id:586612 AM229241.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-83-600A prokMSA_id:591362 AM229243.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-84-212A 1.3.6.3.3.2 g__Methanococcoides 24 seqs 1.3.6.3.3.2.1 Unclassified 12 seqs 1.3.6.3.3.2.1.175 OTU 12 seqs prokMSA_id:40857 AF354132.1 marine sediment clone SB-24a1C2 prokMSA_id:44725 Y16946.1 Methanococcoides sp. str. NaT1 prokMSA_id:137644 AY941801.1 Methanococcoides alaskense str. AK-5 prokMSA_id:137997 AY941802.1 Methanococcoides alaskense str. AK-9 prokMSA_id:157811 DQ058817.1 Cultivation methanogens shal marine sediments Hydrate Ridge Oregon enrichment clone HR-CF-Enrichment-017 prokMSA_id:180087 DQ280485.1 Enrichment isolation methanogens cold marine sediments Skan Bay Alaska and description Methanogenium boonei sp. nov Methanomicrobiales 'SBAK-CO2-reducing Enrichment-4' prokMSA_id:262453 EU585970.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET5_1H2 prokMSA_id:268197 EU585965.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET5_1D11 prokMSA_id:271422 EU585969.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET5_1H1 prokMSA_id:271997 EU585968.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET5_1G9 prokMSA_id:322391 FM179838.1 Biogeochemical processes microbial Gullfaks and Tommeliten methane seeps (Northern North Sea) marine sediments clone Tomm05_1274_3_Arch90 prokMSA_id:559288 FJ656257.1 Periodic sulfide irruptions impact microbial structure and archaeal hypersaline lake water column clone SS_WC_05 1.3.6.3.3.2.2 s__Methanococcoides burtonii 12 seqs 1.3.6.3.3.2.2.176 OTU 12 seqs prokMSA_id:426 X65537.1 Methanococcoides burtonii str. DSM 6242 prokMSA_id:129746 NZ_AADH02000011.1 Methanococcoides burtonii str. DSM 6242 prokMSA_id:130809 NZ_AADH02000023.1 Methanococcoides burtonii str. DSM 6242 prokMSA_id:131914 AADH02000011.1 Methanococcoides burtonii str. DSM 6242 prokMSA_id:134030 NZ_AADH02000008.1 Methanococcoides burtonii str. DSM 6242 prokMSA_id:137521 AADH02000023.1 Methanococcoides burtonii str. DSM 6242 prokMSA_id:137554 AADH02000008.1 Methanococcoides burtonii str. DSM 6242 prokMSA_id:156788 NC_007955.1 Methanococcoides burtonii str. DSM 6242 prokMSA_id:156789 NC_007955.1 Methanococcoides burtonii str. DSM 6242 prokMSA_id:157001 CP000300.1 Methanococcoides burtonii str. DSM 6242 prokMSA_id:157002 CP000300.1 Methanococcoides burtonii str. DSM 6242 prokMSA_id:157003 CP000300.1 Methanococcoides burtonii str. DSM 6242 1.3.6.3.3.3 g__Methanohalophilus 13 seqs 1.3.6.3.3.3.177 OTU 13 seqs prokMSA_id:361 X98192.1 Methanococcoides euhalobius prokMSA_id:132387 DQ103680.1 hypersaline endoevaporitic microbial mat clone ArcB03 prokMSA_id:160425 AM268271.1 Microbial hydrothermal mud vent brine lake Eastern deep-sea hypersaline anoxic Urania Basin Mediterranean Sea clone UB-11A prokMSA_id:160909 AM268272.1 Microbial hydrothermal mud vent brine lake Eastern deep-sea hypersaline anoxic Urania Basin Mediterranean Sea clone UB-12A prokMSA_id:194004 EF031086.1 Prokaryotic Tirez La Macha Spain endorheic hypersaline atalasohaline lake clone SalA34 prokMSA_id:199056 EF190085.1 s Qinghai oilfield clone QGQG2 prokMSA_id:307455 EU731582.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA03C03 prokMSA_id:309529 EU731584.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA03D02 prokMSA_id:326997 EU731585.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA03F08 prokMSA_id:327575 EU731576.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA02G08 prokMSA_id:333004 EU731590.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA02G12 prokMSA_id:334351 EU731575.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA03H06 prokMSA_id:340286 EU731589.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05F06 1.3.6.3.3.4 g__Methanolobus 34 seqs 1.3.6.3.3.4.178 OTU 34 seqs prokMSA_id:418 U20154.1 Methanolobus taylorii str. GS-16 prokMSA_id:436 U20152.1 Methanolobus oregonensis str. WAL1 prokMSA_id:108527 AY570661.1 biodegraded Canadian oil reservoir clone PL-7A3 prokMSA_id:108529 AY570664.1 biodegraded Canadian oil reservoir clone PL-9A3 prokMSA_id:108559 AY570686.1 biodegraded Canadian oil reservoir clone PL-10A6 prokMSA_id:108560 AY570688.1 biodegraded Canadian oil reservoir clone PL-10A1 prokMSA_id:140455 AB237739.1 microorganisms deep subsurface groundwater sedimentary rock milieu clone HDBW-WA06 prokMSA_id:156842 DQ432522.1 prokaryotic alkaline hypersaline lakes Wadi Natrun Egypt Lake Fazda water clone WN-FWA-130 prokMSA_id:160305 DQ631888.1 microbial lab-scale upf anaerobic sludge-blanket reactor fed methanethiol clone MtVII-A7 prokMSA_id:161635 DQ631889.1 microbial lab-scale upf anaerobic sludge-blanket reactor fed methanethiol clone MtVII-A11 prokMSA_id:182015 EF190080.1 s Qinghai oilfield clone YSSG2 prokMSA_id:196239 EF190079.1 s Qinghai oilfield clone YSSG1 prokMSA_id:199952 EF202842.1 Methanolobus sp. str. R15 prokMSA_id:206168 AB294253.1 Microbial structure deep coal seem groundwater clone YWA05 prokMSA_id:211246 EF376989.1 Microbial methanethiol-degrading anaerobic bioreactor elevated pH clone VII-D2 prokMSA_id:215163 EF376986.1 Microbial methanethiol-degrading anaerobic bioreactor elevated pH clone II-B3 prokMSA_id:235555 AB243813.1 Methods Investigate Microbial Niigata oil well clone Niigata-a02 prokMSA_id:259957 EU546845.1 Anaerobic degradation and methanogenic alkaline (pH 10) biological process liquefied petroleum gas (LPG) desulfurization labscale upf anaerobic sludge bed (UASB) reactor fed methanethiol clone IV-E8 prokMSA_id:262001 EU546841.1 Anaerobic degradation and methanogenic alkaline (pH 10) biological process liquefied petroleum gas (LPG) desulfurization labscale upf anaerobic sludge bed (UASB) reactor fed methanethiol clone IV-A6 prokMSA_id:263325 EU546843.1 Anaerobic degradation and methanogenic alkaline (pH 10) biological process liquefied petroleum gas (LPG) desulfurization labscale upf anaerobic sludge bed (UASB) reactor fed methanethiol clone IV-C8 prokMSA_id:264357 AB370247.2 Methanolobus sp. str. HigM prokMSA_id:265165 AB370245.2 Methanolobus sp. str. MobM prokMSA_id:265657 EU585949.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET2_1C9 prokMSA_id:267690 EU546842.1 Anaerobic degradation and methanogenic alkaline (pH 10) biological process liquefied petroleum gas (LPG) desulfurization labscale upf anaerobic sludge bed (UASB) reactor fed methanethiol clone IV-B5 prokMSA_id:268051 EU546844.1 Anaerobic degradation and methanogenic alkaline (pH 10) biological process liquefied petroleum gas (LPG) desulfurization labscale upf anaerobic sludge bed (UASB) reactor fed methanethiol clone IV-E1 prokMSA_id:268187 EU585941.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET2_1A3 prokMSA_id:270806 EU546840.1 Anaerobic degradation and methanogenic alkaline (pH 10) biological process liquefied petroleum gas (LPG) desulfurization labscale upf anaerobic sludge bed (UASB) reactor fed methanethiol clone IV-A3 prokMSA_id:320939 EU711413.1 Methanolobus sp. str. SD1 prokMSA_id:324886 EU731587.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA02C10 prokMSA_id:331896 EU731572.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA01H01 prokMSA_id:353918 EU731578.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA02B07 prokMSA_id:538679 EU293796.1 Methanolobus sp. str. St545Mb prokMSA_id:539582 NR_028237.1 Methanolobus oregonensis str. WAL1; DSM 5435 prokMSA_id:548031 NR_028238.1 Methanolobus taylorii str. GS-16; OCM 58 1.3.6.3.3.5 g__Methanomethylovorans 18 seqs 1.3.6.3.3.5.179 OTU 18 seqs prokMSA_id:431 AF120163.1 Methanomethylovorans hollandica str. DMS1 prokMSA_id:48567 AJ276437.1 Methanomethylovorans victoriae str. TM prokMSA_id:62890 AB077216.1 oil-contaminated groundwater clone KuA6 prokMSA_id:66897 AJ312013.1 DCP-dechlorinating consortium clone SHB-143 prokMSA_id:83794 AY260433.1 Methanomethylovorans hollandica str. ZB prokMSA_id:98957 AY672821.1 Methanomethylovorans thermophila str. L2FAW prokMSA_id:135296 AY526520.1 Microbial thermophilic anaerobic sludge methanol-fed lab scale bioreactor clone P11 prokMSA_id:135312 AY526514.1 Microbial thermophilic anaerobic sludge methanol-fed lab scale bioreactor clone M5 prokMSA_id:135313 AY526519.1 Microbial thermophilic anaerobic sludge methanol-fed lab scale bioreactor clone P10 prokMSA_id:159741 DQ631887.1 microbial lab-scale upf anaerobic sludge-blanket reactor fed methanethiol clone MhI-G4 prokMSA_id:159931 DQ631885.1 microbial lab-scale upf anaerobic sludge-blanket reactor fed methanethiol clone MhI-B1 prokMSA_id:160471 DQ631884.1 microbial lab-scale upf anaerobic sludge-blanket reactor fed methanethiol clone MhI-A10 prokMSA_id:161360 DQ631886.1 microbial lab-scale upf anaerobic sludge-blanket reactor fed methanethiol clone MhI-D9 prokMSA_id:173219 AB266905.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone HnA32fl prokMSA_id:189149 EF174501.1 Methanomethylovorans sp. str. Z1 prokMSA_id:513239 FJ705124.1 Study prokaryotic selected niches Western Ghats India WCS sediment clone ACWCSP1H5 prokMSA_id:554037 AB447821.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_1_055 prokMSA_id:581916 AB447876.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone D242_ARC_0302_2_090 1.3.6.3.3.6 g__Methanosarcina 243 seqs 1.3.6.3.3.6.1 Unclassified 199 seqs 1.3.6.3.3.6.1.180 OTU 199 seqs prokMSA_id:403 AJ012742.1 Methanosarcina semesiae str. MD1 (DSM 12914) prokMSA_id:472 U89773.1 Methanosarcina siciliae str. C2J prokMSA_id:475 AJ238648.1 Methanosarcina baltica str. GS1- prokMSA_id:490 AJ012094.1 Methanosarcina barkeri str. DSM 800 (T) OCM 38 prokMSA_id:491 AF028692.1 Methanosarcina barkeri str. Sar prokMSA_id:498 U81777.2 anaerobic digestor clone vadinCA25 prokMSA_id:514 AJ002476.1 Methanosarcina barkeri str. CM1 prokMSA_id:52710 AF432127.1 Methanosarcina lacustris str. ZS prokMSA_id:67139 AB084244.1 solid waste landfill clone LCE prokMSA_id:83898 AY260431.1 Methanosarcina lacustris str. MS prokMSA_id:85506 AY260430.1 Methanosarcina lacustris str. MM prokMSA_id:90165 AY225109.1 biogas reactor manure clone M1.3 prokMSA_id:97239 AY196682.1 Methanosarcina barkeri prokMSA_id:102197 AB092915.2 acetate-degrading methanogenic consortium clone DA16 prokMSA_id:107074 AY667271.1 TCE-dechlorinating groundwater clone TANA1 prokMSA_id:107542 AB114309.1 thermophilic anaerobic municipal solid waste digester clone MANA01 prokMSA_id:108522 AY570657.1 biodegraded Canadian oil reservoir clone PL-36A11 prokMSA_id:108523 AY570658.1 biodegraded Canadian oil reservoir clone PL-37A1 prokMSA_id:108531 AY570674.1 biodegraded Canadian oil reservoir clone PL-11A8 prokMSA_id:108555 AY570679.1 biodegraded Canadian oil reservoir clone PL-28A1 prokMSA_id:108557 AY570681.1 biodegraded Canadian oil reservoir clone PL-38A6 prokMSA_id:125712 AY663809.1 Methanosarcina baltica str. AK-4 prokMSA_id:128321 DQ068083.1 flowing borehole in South African gold mine, Evander 2 shaft, 19 level, BH5 clone IRBA7 prokMSA_id:129432 DQ068085.1 flowing borehole in South African gold mine, Evander 2 shaft, 19 level, BH5 clone IRBA1 prokMSA_id:135633 AY641448.1 Stable-Isotope Probing Microorganisms Thriving Thermodynamic Limits: Syntrophic Propionate Oxidation Flooded Soil anoxic rice field soil clone 8-5Ar23 prokMSA_id:136527 DQ068084.1 situ cultivation deep subsurface microorganisms mafic sill: implications SLiME's flowing borehole South African gold mine Evander 2 shaft 19 level BH5 clone IRBA16 prokMSA_id:137892 DQ058823.1 Methanosarcina lacustris str. FRX-1 prokMSA_id:140498 AB237738.1 microorganisms deep subsurface groundwater sedimentary rock milieu clone HDBW-WA05 prokMSA_id:145219 AB244741.1 Microbial Mesophilic Anaerobic Glycerol Degradation Process Chemostat Cultivation mesophilic anaerobic glycerol-fed reactor clone GLY1A01 prokMSA_id:170290 AB266912.1 microbial various upf anaerobic blanket granular sludges mesophilic UASB sludge granules clone KsuA75fl prokMSA_id:192947 DQ250385.1 Methanosarcina sp. str. AK-6 prokMSA_id:204337 AB288262.3 Methanosarcina sp. HB-1 prokMSA_id:205978 AB288283.1 Methanosarcina sp. T36 prokMSA_id:206231 AB288259.1 Cultivation methanogens artesian spring and sedimentary aquifers northern Japan enrichment deep subsurface groundwater coal mine field clone YC-E5 prokMSA_id:208168 AB288243.1 Cultivation methanogens and deep sedimentary aquifers northern Japan enrichment aquifer artesian spring clone HA-E3 prokMSA_id:208262 AB288247.1 Cultivation methanogens artesian spring and aquifers northern Japan enrichment deep subsurface groundwater sedimentary rock milieu clone HC-E1 prokMSA_id:210717 AB288241.1 Cultivation methanogens and deep sedimentary aquifers northern Japan enrichment aquifer artesian spring clone HA-E1 prokMSA_id:210787 AB288255.1 Cultivation methanogens artesian spring and sedimentary aquifers northern Japan enrichment deep subsurface groundwater coal mine field clone YC-E1 prokMSA_id:210889 AB288257.1 Cultivation methanogens artesian spring and sedimentary aquifers northern Japan enrichment deep subsurface groundwater coal mine field clone YC-E3 prokMSA_id:211908 AB294254.1 Microbial structure deep coal seem groundwater clone YWA06 prokMSA_id:212545 AB288264.2 Methanosarcina sp. HC-2 prokMSA_id:213391 EF376987.1 Microbial methanethiol-degrading anaerobic bioreactor elevated pH clone II-C7 prokMSA_id:214232 AB288244.1 Cultivation methanogens artesian spring and aquifers northern Japan enrichment deep subsurface groundwater sedimentary rock milieu clone HB-E1 prokMSA_id:214822 AB288240.1 Cultivation methanogens artesian spring and aquifers northern Japan deep subsurface groundwater sedimentary rock milieu clone HDBW-WA05-C01 prokMSA_id:237782 EU155897.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_B1A prokMSA_id:240180 EU155944.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_B12F prokMSA_id:245047 EU155899.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_15C prokMSA_id:249328 EU155943.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MH1492_3E prokMSA_id:253187 EU155898.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_13B prokMSA_id:255120 EU155896.1 Archaeal Rich Minerotrophic Fen and T-RFLP-Directed Isolation Hydrogenotrophic Methanogen: Candidatus Methanosphaerula palustris rich minerotrophic fen clone MHLsu47_111G prokMSA_id:258264 EU369610.1 study prokaryotic approach landfill clone 5.5ft C38A prokMSA_id:264516 EU369625.1 study prokaryotic approach landfill clone 5.5ft C146A prokMSA_id:265773 EU369614.1 study prokaryotic approach landfill clone 5.5ft C55A prokMSA_id:266093 EU369617.1 study prokaryotic approach landfill clone 5.5ft C75A prokMSA_id:268738 EU369618.1 study prokaryotic approach landfill clone 5.5ft C85A prokMSA_id:270063 EU369604.1 study prokaryotic approach landfill clone 5.5ft C10A prokMSA_id:271369 AB300208.1 Methanosarcina sp. str. 2214B prokMSA_id:271901 EU369605.1 study prokaryotic approach landfill clone 5.5ft C17A prokMSA_id:272604 EU369623.1 study prokaryotic approach landfill clone 5.5ft C140A prokMSA_id:330573 EU910623.1 Eukaryal and Archaeal Middle Island sinkhole (Lake Huron USA) sediment clone F10 prokMSA_id:361031 EU857628.1 Isolation methanogenic Nisargruna Biogas Plant clone prokMSA_id:367815 EU857627.1 Isolation methanogenic Nisargruna Biogas Plant clone prokMSA_id:386754 FJ982669.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone PASLSS0.5m_3 prokMSA_id:405660 FJ982701.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMPFLSS56m_1 prokMSA_id:421535 FJ982667.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone PASLSS0.5m_20 prokMSA_id:533048 AB541716.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_22 prokMSA_id:534012 AB541886.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_30 prokMSA_id:534864 AB541866.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_10 prokMSA_id:535652 AB541667.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_29 prokMSA_id:536168 AB541871.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_15 prokMSA_id:536256 AB541827.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_6 prokMSA_id:537010 AB541706.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_12 prokMSA_id:537578 FJ685733.1 Study Prokaryotic Selected Niches Western Ghats India mangrove clone ACSAS2P1C5 prokMSA_id:537710 AB541941.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_18 prokMSA_id:538640 AB541942.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_19 prokMSA_id:538661 AB541707.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_13 prokMSA_id:539049 AB541604.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_13 prokMSA_id:539384 AB541835.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_14 prokMSA_id:540030 AB541927.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_4 prokMSA_id:540054 AB541929.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_6 prokMSA_id:540747 AB541826.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_5 prokMSA_id:542466 AB541615.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_24 prokMSA_id:543228 AB541597.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_6 prokMSA_id:544346 AB541935.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_12 prokMSA_id:544742 AB541587.1 Changes archaeal structure during composting process cattle manure compost clone K08_2_14 prokMSA_id:545947 AB541868.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_12 prokMSA_id:546267 AB541614.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_23 prokMSA_id:547310 AB541836.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_15 prokMSA_id:547366 AB541595.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_4 prokMSA_id:547520 AB541940.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_17 prokMSA_id:547729 AB541951.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_28 prokMSA_id:548386 AB541598.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_7 prokMSA_id:548933 AB541601.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_10 prokMSA_id:549022 AB541885.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_29 prokMSA_id:549088 NR_025303.1 Methanosarcina barkeri str. DSM 800 prokMSA_id:549670 AB541600.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_9 prokMSA_id:550093 AB541743.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_10 prokMSA_id:550407 AB541938.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_15 prokMSA_id:552826 AB541712.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_18 prokMSA_id:554974 AB541738.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_5 prokMSA_id:555194 AB541798.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_36 prokMSA_id:556089 AB541884.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_28 prokMSA_id:557529 AB541828.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_7 prokMSA_id:557680 AB541590.1 Changes archaeal structure during composting process cattle manure compost clone K08_2_17 prokMSA_id:558836 AB541741.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_8 prokMSA_id:559311 AB541874.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_18 prokMSA_id:559419 AB494248.1 microbial anaerobic digester sludge clone SA16 prokMSA_id:560255 AB541932.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_9 prokMSA_id:560675 AB541944.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_21 prokMSA_id:561082 AB541672.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_34 prokMSA_id:561096 AB541608.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_17 prokMSA_id:561107 AB541928.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_5 prokMSA_id:561237 AB541857.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_1 prokMSA_id:561328 AB541603.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_12 prokMSA_id:561409 AB541893.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_37 prokMSA_id:561550 AB541586.1 Changes archaeal structure during composting process cattle manure compost clone K08_2_13 prokMSA_id:561891 AB541705.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_11 prokMSA_id:562762 AB541609.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_18 prokMSA_id:563007 AB541594.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_3 prokMSA_id:563268 AB541803.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_41 prokMSA_id:563584 AB541745.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_12 prokMSA_id:563662 EU420708.1 Archaeal and Kao-Mei Wetland clone KM07-Fa-1-1 prokMSA_id:564414 AB541876.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_20 prokMSA_id:564594 AB541878.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_22 prokMSA_id:564827 AB541859.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_3 prokMSA_id:565127 AB541824.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_3 prokMSA_id:566556 AB541631.1 Changes archaeal structure during composting process cattle manure compost clone K08_21_12 prokMSA_id:566741 AB541801.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_39 prokMSA_id:567094 AB541883.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_27 prokMSA_id:567385 AB541882.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_26 prokMSA_id:567809 AB541665.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_27 prokMSA_id:568558 AB541875.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_19 prokMSA_id:568842 AB541718.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_24 prokMSA_id:569521 AB541805.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_43 prokMSA_id:571170 AB541931.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_8 prokMSA_id:572752 AB541663.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_25 prokMSA_id:572978 AB541717.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_23 prokMSA_id:573406 AB541713.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_19 prokMSA_id:574159 AB541861.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_5 prokMSA_id:576033 AB541660.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_22 prokMSA_id:576967 AB541877.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_21 prokMSA_id:577163 AB541939.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_16 prokMSA_id:577310 AB541889.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_33 prokMSA_id:578082 AB541887.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_31 prokMSA_id:578432 AB541865.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_9 prokMSA_id:578558 AB541863.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_7 prokMSA_id:578838 AB541891.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_35 prokMSA_id:578923 AB541873.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_17 prokMSA_id:579673 AB541739.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_6 prokMSA_id:579857 AB541670.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_32 prokMSA_id:580153 AB541830.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_9 prokMSA_id:580589 AB541622.1 Changes archaeal structure during composting process cattle manure compost clone K08_21_3 prokMSA_id:581269 AB541673.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_35 prokMSA_id:581324 AB541602.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_11 prokMSA_id:581614 AB541862.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_6 prokMSA_id:582056 AB541937.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_14 prokMSA_id:582078 AB541737.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_4 prokMSA_id:582517 AB541795.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_33 prokMSA_id:582736 AB541952.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_29 prokMSA_id:583079 AB541583.1 Changes archaeal structure during composting process cattle manure compost clone K08_2_10 prokMSA_id:583354 AB541867.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_11 prokMSA_id:583637 AB541593.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_2 prokMSA_id:583698 AB541888.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_32 prokMSA_id:583812 AB541864.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_8 prokMSA_id:583891 AB541625.1 Changes archaeal structure during composting process cattle manure compost clone K08_21_6 prokMSA_id:584119 AB541661.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_23 prokMSA_id:584217 GQ328819.1 Reduction accumulated volatile fatty acids acetate-degrading enrichment 1L labscale inoculated anaerobic digester sludge clone 1G prokMSA_id:584310 AB541823.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_2 prokMSA_id:585026 AB541634.1 Changes archaeal structure during composting process cattle manure compost clone K08_21_15 prokMSA_id:585292 AB541890.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_34 prokMSA_id:585716 AB541822.1 Changes archaeal structure during composting process cattle manure compost clone K09_16_1 prokMSA_id:585961 AB541671.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_33 prokMSA_id:586347 AB541596.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_5 prokMSA_id:586386 AB541869.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_13 prokMSA_id:586413 AB541666.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_28 prokMSA_id:586456 AB541746.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_13 prokMSA_id:586954 AB541879.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_23 prokMSA_id:588189 AB541748.1 Changes archaeal structure during composting process cattle manure compost clone K09_6_15 prokMSA_id:588396 AB541582.1 Changes archaeal structure during composting process cattle manure compost clone K08_2_9 prokMSA_id:588654 AB541624.1 Changes archaeal structure during composting process cattle manure compost clone K08_21_5 prokMSA_id:588833 AB541605.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_14 prokMSA_id:588891 AB541860.1 Changes archaeal structure during composting process cattle manure compost clone K09_24_4 prokMSA_id:588925 AB541668.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_30 prokMSA_id:589226 AB541714.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_20 prokMSA_id:589926 AB541710.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_16 prokMSA_id:589997 AB541662.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_24 prokMSA_id:590068 AB541709.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_15 prokMSA_id:590673 AB541629.1 Changes archaeal structure during composting process cattle manure compost clone K08_21_10 prokMSA_id:591096 AB541613.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_22 prokMSA_id:591307 AB541669.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_31 prokMSA_id:591886 AB541632.1 Changes archaeal structure during composting process cattle manure compost clone K08_21_13 prokMSA_id:592588 AB541606.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_15 prokMSA_id:592614 AB541610.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_19 prokMSA_id:592689 AB541715.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_21 prokMSA_id:592929 AB541945.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_22 prokMSA_id:592995 AB541799.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_37 prokMSA_id:593021 AB541584.1 Changes archaeal structure during composting process cattle manure compost clone K08_2_11 prokMSA_id:593274 AB541950.1 Changes archaeal structure during composting process cattle manure compost clone K09_30_27 prokMSA_id:594055 AB541708.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_14 1.3.6.3.3.6.2 s__Methanosarcina acetivorans 6 seqs 1.3.6.3.3.6.2.181 OTU 6 seqs prokMSA_id:55681 NC_003552.1 Methanosarcina acetivorans str. C2A prokMSA_id:129138 NC_003552.1 Methanosarcina acetivorans str. C2A prokMSA_id:129142 NC_003552.1 Methanosarcina acetivorans str. C2A prokMSA_id:146358 AE010299.1 Methanosarcina acetivorans str. C2A prokMSA_id:146413 AE010299.1 Methanosarcina acetivorans str. C2A prokMSA_id:146450 AE010299.1 Methanosarcina acetivorans str. C2A 1.3.6.3.3.6.3 s__Methanosarcina barkeri 7 seqs 1.3.6.3.3.6.3.182 OTU 7 seqs prokMSA_id:130989 NZ_AAAR03000001.1 Methanosarcina barkeri str. fusaro prokMSA_id:139492 NC_007355.1 Methanosarcina barkeri str. fusaro prokMSA_id:139493 NC_007355.1 Methanosarcina barkeri str. fusaro prokMSA_id:139494 NC_007355.1 Methanosarcina barkeri str. fusaro prokMSA_id:139847 CP000099.1 Methanosarcina barkeri str. fusaro prokMSA_id:139851 CP000099.1 Methanosarcina barkeri str. fusaro prokMSA_id:139866 CP000099.1 Methanosarcina barkeri str. fusaro 1.3.6.3.3.6.4 s__Methanosarcina mazei 31 seqs 1.3.6.3.3.6.4.183 OTU 31 seqs prokMSA_id:373 AJ012095.1 Methanosarcina mazei str. DSM 2053(T) OCM 26 prokMSA_id:374 AF028691.1 Methanosarcina mazei str. SarPi prokMSA_id:380 U81776.2 anaerobic digestor clone vadinDA05 prokMSA_id:439 X69874.1 Methanosarcina mazei str. Go1 prokMSA_id:476 AF020341.1 Methanosarcina sp. str. FR prokMSA_id:18470 AF411467.1 Methanosarcina mazei str. O1M9704b; OCM 670 prokMSA_id:18827 AF411469.1 Methanosarcina mazei str. O1M9701; OCM 748 prokMSA_id:30939 AB065295.1 Methanosarcina mazei str. TMA prokMSA_id:84434 AY260432.1 Methanosarcina mazei str. MT prokMSA_id:88792 AF519802.1 Methanosarcina sp. str. JL01 prokMSA_id:91846 AB065296.1 Methanosarcina mazei str. LYC prokMSA_id:98756 AY196685.1 Methanosarcina mazei str. C16 prokMSA_id:104887 AY692059.1 UASB reactor clone M15 prokMSA_id:108682 NC_003901.1 Methanosarcina mazei Go1 str. Goe1 prokMSA_id:129054 NC_003901.1 Methanosarcina mazei Go1 str. Goe1 prokMSA_id:129057 NC_003901.1 Methanosarcina mazei Go1 str. Goe1 prokMSA_id:157813 DQ478747.1 UASB reactor treating brewery wastewater clone CLONG74 prokMSA_id:206978 EF452664.1 Methanosarcina mazei str. M-1 prokMSA_id:210121 DQ339721.1 assessment complex microbial degrading long chain fatty acids (LCFA) methanogenic bioreactors anaerobic sludge submitted extended contact LCFA clone lcfa_Ab67 prokMSA_id:212881 DQ339720.1 assessment complex microbial degrading long chain fatty acids (LCFA) methanogenic bioreactors anaerobic sludge submitted extended contact LCFA clone lcfa_Ab59 prokMSA_id:254850 DQ987528.1 Methanosarcina mazei str. LM5 prokMSA_id:373904 FJ982703.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMPUFLSS70m_6 prokMSA_id:392704 FJ982743.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMPFLSS58m_1 prokMSA_id:411388 FJ982740.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMPFLSS58m_2 prokMSA_id:442056 FJ982707.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMPUFLSS70m_7 prokMSA_id:451189 FJ982711.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMPUFLSS70_7 prokMSA_id:467541 FJ982708.1 Microbial Terrestrial and Submarine Permafrost Sediments Siberian Laptev Sea Area submarine permafrost clone SMPUFLSS70m_5 prokMSA_id:545875 AB541635.1 Changes archaeal structure during composting process cattle manure compost clone K08_21_16 prokMSA_id:551637 AB541616.1 Changes archaeal structure during composting process cattle manure compost clone K08_14_25 prokMSA_id:565928 AB541628.1 Changes archaeal structure during composting process cattle manure compost clone K08_21_9 prokMSA_id:585948 AB541627.1 Changes archaeal structure during composting process cattle manure compost clone K08_21_8 1.3.7 c__Methanopyri 7 seqs 1.3.7.1 o__Methanopyrales 7 seqs 1.3.7.1.1 f__Methanopyraceae 7 seqs 1.3.7.1.1.1 g__Methanopyrus 7 seqs 1.3.7.1.1.1.1 s__Methanopyrus kandleri 7 seqs 1.3.7.1.1.1.1.184 OTU 7 seqs prokMSA_id:822 M59932.1 Methanopyrus kandleri str. av19 prokMSA_id:62897 AE010349.1 Methanopyrus kandleri str. AV19 prokMSA_id:64372 NC_003551.1 Methanopyrus kandleri str. AV19 prokMSA_id:223234 AB301476.1 Methanopyrus kandleri str. 116 prokMSA_id:239922 DQ925859.1 Microbes and Thermal Gradients Temperature Hydrothermal Chimneys hydrothermal vent chimneys Guaymas Basin clone 147A13 prokMSA_id:366275 EU606020.1 86% Methanopyrus kandleri sheep rumen clone prokMSA_id:526964 AE009439.1 Methanopyrus kandleri str. AV19 1.3.8 c__Thermococci 206 seqs 1.3.8.1 o__Thermococcales 206 seqs 1.3.8.1.1 f__Thermococcaceae 206 seqs 1.3.8.1.1.1 Unclassified 46 seqs 1.3.8.1.1.1.185 OTU 46 seqs prokMSA_id:756 Z70250.1 Thermococcus fumicolans str. ST557 prokMSA_id:757 Y08384.1 Thermococcus aggregans str. DSM 10597 prokMSA_id:770 U82237.1 Thermococcus barophilus prokMSA_id:776 U82238.1 Thermococcus sp. ES1 prokMSA_id:786 Z75218.1 Thermococcus mexicalis str. GY 869 prokMSA_id:787 AB016298.1 Thermococcus sp str. B1001 prokMSA_id:791 AJ012644.3 "Aphrodite sulfophila" prokMSA_id:792 AJ012643.2 "Thermococcus aegeaicus" prokMSA_id:804 Z70252.1 "Thermococcus litoralis" prokMSA_id:805 Z70245.1 Thermococcus sp str. GE3 prokMSA_id:819 Y08385.1 Thermococcus guaymasensis str. DSM 11113 prokMSA_id:31437 AJ291809.1 Thermococcus gorgonarius str. DSM 10395 Type prokMSA_id:33569 E17110.1 Thermococcus sp. B-1001 prokMSA_id:41114 AJ298872.1 Thermococcus alcaliphilus str. DSM 10322 prokMSA_id:46577 AJ238992.1 Thermococcus sibiricus str. MM739 prokMSA_id:48696 AB055121.1 Thermococcus alcaliphilus str. DSM 10322 prokMSA_id:49071 E30964.1 Thermococcus sp prokMSA_id:58650 AJ419869.1 Thermococcus sp. str. MV1099 prokMSA_id:74471 AJ291812.1 Thermococcus alcaliphilus str. DSM 10322 Type prokMSA_id:101290 AY559142.1 Thermococcus sp. str. Ax99-57 prokMSA_id:101410 AY099180.1 Thermococcus litoralis str. DSM 5474 prokMSA_id:101583 AY099181.1 Thermococcus mexicalis str. GY 869 prokMSA_id:103355 AJ310754.1 Thermococcus atlanticus str. MA898 prokMSA_id:103436 AJ419871.1 Thermococcus sp. str. MV1092 prokMSA_id:103572 AJ419872.1 Thermococcus sp. str. MV1083 prokMSA_id:103714 AJ419873.1 Thermococcus sp. str. MV1031 prokMSA_id:105419 AY099171.1 Thermococcus aegaeus str. DSM 12767 prokMSA_id:105574 AY099172.1 Thermococcus barophilus str. DSM 11836 prokMSA_id:105767 AY559136.1 Thermococcus sp. str. Ax01-37 prokMSA_id:109726 AJ874316.1 continuous enrichment hydrothermal black chimney clone A254 prokMSA_id:139229 DQ082977.1 40 kbp uncultivated euryarchaeotal fosmid microbial polychaete annelid Alvinella pompejana deep sea hydrothermal vent 13 degree North EPR clone FOS0 prokMSA_id:142350 DQ228621.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH3a3 prokMSA_id:142466 DQ228614.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH2a2 prokMSA_id:142632 DQ228626.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone OUTa8 prokMSA_id:157362 AJ969470.1 Microbial black smoker s Mid Atlantic Ridge ecological implications rock fragments chimney deep sea hydrothermal vent field clone PICO pp37 Rainbow 110A prokMSA_id:202400 AY766305.1 use situ growth chamber microbial studies deep sea vents VC2.2 hydrothermal chimney Snake Pit site on mid Atlantic ridge clone 3 prokMSA_id:239011 EF198107.1 Thermococcus sp. HJ21 prokMSA_id:514441 CP001463.1 Thermococcus sibiricus str. MM 739 prokMSA_id:542726 FN356410.1 Prokaryotic structure sulfate reducer activity -temperature reservoirs and without nitrate treatment oil production water clone Hda_Arch43 prokMSA_id:548828 FJ638511.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCL50a_02_02 prokMSA_id:567862 FJ638515.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCL50a_06_15 prokMSA_id:568738 NR_028251.1 Thermococcus guaymasensis str. TYS; DSM 11113 prokMSA_id:575984 FJ638500.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCLunma_01_04 prokMSA_id:581385 NR_029055.1 Thermococcus aegaeus str. P5; DSM 12767 prokMSA_id:585542 FN356359.1 Prokaryotic structure sulfate reducer activity -temperature reservoirs and without nitrate treatment oil production water clone Dan_Arch64 prokMSA_id:587580 FN356409.1 Prokaryotic structure sulfate reducer activity -temperature reservoirs and without nitrate treatment oil production water clone Hda_Arch42 1.3.8.1.1.2 g__Palaeococcus 10 seqs 1.3.8.1.1.2.186 OTU 10 seqs prokMSA_id:807 AB019239.1 Palaeococcus ferrophilus str. DMJ prokMSA_id:58788 AY134472.1 Palaeococcus helgesonii str. PI1 prokMSA_id:100398 AY559124.1 Palaeococcus sp. str. Ax00-33 prokMSA_id:141534 DQ300323.1 Archaeal and geochemical energy yields on Vulcano Island Italy geothermal well clone VulcPIw.121 prokMSA_id:141853 DQ300329.1 Archaeal and geochemical energy yields on Vulcano Island Italy geothermal well clone VulcPIw.19 prokMSA_id:142586 DQ300333.1 Archaeal and geochemical energy yields on Vulcano Island Italy geothermal well clone VulcPIw.31 prokMSA_id:142830 DQ300335.1 Archaeal and geochemical energy yields on Vulcano Island Italy geothermal well clone VulcPIw.38 prokMSA_id:142980 DQ300336.1 Archaeal and geochemical energy yields on Vulcano Island Italy geothermal well clone VulcPIw.4 prokMSA_id:548466 NR_029059.1 Palaeococcus helgesonii str. PI1; DSM 15127 prokMSA_id:575177 NR_028149.1 Palaeococcus ferrophilus str. DMJ; DSM 13482 1.3.8.1.1.3 g__Pyrococcus 36 seqs 1.3.8.1.1.3.1 Unclassified 32 seqs 1.3.8.1.1.3.1.187 OTU 32 seqs prokMSA_id:758 Z54172.1 Pyrococcus sp str. GE23 prokMSA_id:759 Z70246.1 Pyrococcus abyssi str. ST546 prokMSA_id:760 AJ225071.1 Pyrococcus abyssi str. ST549 prokMSA_id:761 L19921.1 Pyrococcus abyssi prokMSA_id:762 AP000001.1 Pyrococcus horikoshii str. OT3 prokMSA_id:763 D45214.1 Pyrococcus horikoshii str. OT3 prokMSA_id:766 U20163.1 Pyrococcus furiosus prokMSA_id:768 X99570.1 Thermococcus chitonophagus str. GC74 DSM10152 prokMSA_id:769 Z70247.1 Pyrococcus sp str. AL585 prokMSA_id:99378 AJ419868.1 Pyrococcus sp. str. MV1019 prokMSA_id:100032 AJ585956.2 enrichment hydrothermal black smoker clone T17a-60 prokMSA_id:100193 AJ585957.2 enrichment hydrothermal black smoker clone T17a-44 prokMSA_id:100501 AJ585959.2 enrichment hydrothermal black smoker clone T30a-17 prokMSA_id:100556 AY559125.1 Pyrococcus sp. str. Ax99-7 prokMSA_id:100822 AY099164.1 Pyrococcus sp. str. 32-4 prokMSA_id:101149 AY099166.1 Pyrococcus abyssi str. GE23 prokMSA_id:101303 AY099167.1 Pyrococcus abyssi str. GE5 prokMSA_id:101482 AY099168.1 Pyrococcus glycovorans str. AL585 prokMSA_id:101648 AY099169.1 Pyrococcus horikoshii str. DSM 12428 prokMSA_id:106028 AY099175.1 Thermococcus chitonophagus str. DSM 10152 prokMSA_id:111702 AY017182.1 Pyrococcus sp. str. MZ14 prokMSA_id:111779 AY017173.1 Pyrococcus sp. str. MZ4 prokMSA_id:111955 AF411292.1 Pyrococcus sp. str. JT1 prokMSA_id:112119 AJ248283.1 Pyrococcus abyssi GE5 str. Orsay prokMSA_id:112417 NC_000868.1 Pyrococcus abyssi str. GE5 prokMSA_id:137113 BA000001.2 Pyrococcus horikoshii str. OT3 prokMSA_id:139433 DQ167233.1 Pyrococcus sp. str. NA2 prokMSA_id:156403 AB235311.1 Pyrococcus sp. str. 95-12-1 prokMSA_id:341886 EU682399.1 Pyrococcus sp. str. CH1 prokMSA_id:447707 FJ949575.1 Pyrococcus sp. str. C2 prokMSA_id:556285 NR_029054.1 Pyrococcus horikoshii str. JA-1; DSM 12428 prokMSA_id:556507 NR_029053.1 Pyrococcus glycovorans str. AL585; CNCM I-2120 1.3.8.1.1.3.2 s__Pyrococcus furiosus 4 seqs 1.3.8.1.1.3.2.188 OTU 4 seqs prokMSA_id:107337 AY519654.1 Pyrococcus woesei prokMSA_id:108031 NC_003413.1 Pyrococcus furiosus str. DSM 3638 prokMSA_id:111537 AE010139.1 Pyrococcus furiosus str. DSM 3638 prokMSA_id:529416 AE009950.1 Pyrococcus furiosus str. DSM 3638 1.3.8.1.1.4 g__Thermococcus 114 seqs 1.3.8.1.1.4.1 Unclassified 93 seqs 1.3.8.1.1.4.1.189 OTU 93 seqs prokMSA_id:777 Z70244.1 Thermococcus hydrothermalis str. AL662 prokMSA_id:781 Z70251.1 Thermococcus sp str. GE20 prokMSA_id:784 M21529.1 Thermococcus celer prokMSA_id:789 U76535.1 "Thermococcus barossii" prokMSA_id:790 U76534.1 Thermococcus zilligii str. AN1 prokMSA_id:799 AF068813.2 hydrothermal vent clone VC2.1 Arc1 prokMSA_id:800 AF068816.2 hydrothermal vent clone VC2.1 Arc5 prokMSA_id:802 AF068821.2 hydrothermal vent clone VC2.1 Arc16 prokMSA_id:803 AF068823.2 hydrothermal vent clone VC2.1 Arc35 prokMSA_id:806 Z70249.1 Thermococcus sp str. ST554 prokMSA_id:809 Z75233.1 Thermococcus profundus str. DT5432 prokMSA_id:810 AF098975.1 Thermococcus waimanguensis str. Wai21.S1 prokMSA_id:811 AF017455.1 Thermococcus sp. str. Rt3 prokMSA_id:812 AF134982.1 Thermococcus waiotapuensis str. WT1 prokMSA_id:814 Z75240.1 Thermococcus stetteri str. K3 prokMSA_id:18391 AF479013.1 Thermococcus radiotolerans str. EJ2 prokMSA_id:30964 AB055123.1 Thermococcus gorgonarius str. JCM 10552 prokMSA_id:32059 AJ298871.1 Thermococcus peptonophilus str. DSM 10343 prokMSA_id:32192 AJ291810.1 Thermococcus peptonophilus str. DSM 10343 Type prokMSA_id:34911 AB017920.1 Desulfurococcus sp. str. SY prokMSA_id:43730 AF479014.2 Thermococcus tolerans str. EJ3 prokMSA_id:48762 AB055125.1 Thermococcus peptonophilus str. JCM 9653 prokMSA_id:54119 AY017171.1 Thermococcus sp. str. MZ2 prokMSA_id:54189 AY017170.1 Thermococcus sp. str. MZ1 prokMSA_id:54583 AY017180.1 Thermococcus sp. str. MZ12 prokMSA_id:54651 AY017174.1 Thermococcus sp. str. MZ5 prokMSA_id:54665 AY017181.1 Thermococcus sp. str. MZ13 prokMSA_id:55014 AY017175.1 Thermococcus sp. str. MZ6 prokMSA_id:68329 AF356631.1 Guaymas Basin clone G26_C48 prokMSA_id:69804 AF419641.1 Guaymas Basin hydrothermal sediment clone C1_R034 prokMSA_id:73209 AF479012.1 Thermococcus marinus str. EJ1 prokMSA_id:88209 AB107769.1 Thermococcus sp. str. TS3 prokMSA_id:89817 AB107768.1 Thermococcus sp. str. TS2 prokMSA_id:90070 AB107767.1 Thermococcus sp. str. TS1 prokMSA_id:99167 AJ583507.1 Thermococcus sp. str. AM4 prokMSA_id:99458 AB111030.1 hydrothermal fluid clone AB111030 prokMSA_id:100205 AY099160.1 Thermococcus sp. str. 29-1 prokMSA_id:100347 AJ585958.2 enrichment hydrothermal black smoker clone T30a-18 prokMSA_id:100362 AY099161.1 Thermococcus sp. str. 30-1 prokMSA_id:100514 AY099162.1 Thermococcus sp. str. 31-1 prokMSA_id:100667 AY099163.1 Thermococcus sp. str. 31-3 prokMSA_id:100712 AY559126.1 Thermococcus sp. str. Ax98-48 prokMSA_id:100868 AY559127.1 Thermococcus sp. str. Ax98-46 prokMSA_id:100970 AY559140.1 Thermococcus sp. str. Ax01-61 prokMSA_id:100984 AY099165.1 Thermococcus sp. str. 5-1 prokMSA_id:101029 AY559128.1 Thermococcus sp. str. Ax01-2 prokMSA_id:101132 AY559141.1 Thermococcus sp. str. Ax01-3 prokMSA_id:101199 AY559129.1 Thermococcus sp. str. Ax01-62 prokMSA_id:102070 AY099184.1 Thermococcus profundus str. DSM 9503 prokMSA_id:102366 AY099186.1 Thermococcus stetteri str. DSM 5262 prokMSA_id:103286 AJ419870.1 Thermococcus sp. str. MV1049 prokMSA_id:104066 AY251066.2 deep-sea hydrothermal biofilm Edmond vent field on Central Indian Ridge clone FT17A18 prokMSA_id:104203 AY206704.1 Thermococcus sp. str. 23-2 prokMSA_id:104361 AY206705.1 Thermococcus tolerans str. FJ3 prokMSA_id:104413 AY099152.1 Thermococcus sp. str. 12-4 prokMSA_id:104569 AY099153.1 Thermococcus sp. str. 13-2 prokMSA_id:104717 AY099154.1 Thermococcus sp. str. 13-3 prokMSA_id:104859 AY559130.1 Thermococcus sp. str. Ax00-27 prokMSA_id:104876 AY099155.1 Thermococcus sp. str. 21-1 prokMSA_id:104997 AY559131.1 Thermococcus sp. str. Ax00-45 prokMSA_id:105016 AY099156.1 Thermococcus sp. str. 23-1 prokMSA_id:105147 AY559132.1 Thermococcus sp. str. Ax99-47 prokMSA_id:105168 AY099157.1 Thermococcus sp. str. 26-2 prokMSA_id:105309 AY559133.1 Thermococcus sp. str. Ax01-65 prokMSA_id:105329 AY099158.1 Thermococcus sp. str. 26-3 prokMSA_id:105467 AY559134.1 Thermococcus sp. str. Ax01-39 prokMSA_id:105483 AY099159.1 Thermococcus sp. str. 28-1 prokMSA_id:105614 AY559135.1 Thermococcus sp. str. Ax00-39 prokMSA_id:105723 AY099173.1 Thermococcus barossii str. DSM 9535 prokMSA_id:105872 AY099174.1 Thermococcus celer str. DSM 2476 prokMSA_id:105922 AY559137.1 Thermococcus sp. str. Ax00-17 prokMSA_id:106076 AY559138.1 Thermococcus sp. str. Ax98-43 prokMSA_id:106227 AY559139.1 Thermococcus sp. str. Ax99-67 prokMSA_id:106344 AY099177.1 Thermococcus gorgonarius str. DSM 10395 prokMSA_id:106507 AY099178.1 Thermococcus guaymasensis str. DSM 11113 prokMSA_id:106666 AY099179.1 Thermococcus hydrothermalis str. AL662 prokMSA_id:109906 AJ874326.1 Thermococcus sp. str. AT1273 prokMSA_id:110565 AJ874318.1 continuous enrichment hydrothermal black chimney clone A800 prokMSA_id:111068 AJ874317.1 continuous enrichment hydrothermal black chimney clone A704 prokMSA_id:111442 AY017177.1 Thermococcus sp. str. MZ9 prokMSA_id:111565 U47109.1 Thermococcus sp. str. 9oN-7 prokMSA_id:111620 AY017178.1 Thermococcus sp. str. MZ10 prokMSA_id:112094 AY017179.1 Thermococcus sp. str. MZ11 prokMSA_id:112107 AY017172.1 Thermococcus sp. str. MZ3 prokMSA_id:112383 AF394925.2 Thermococcus sulfurophilus str. OGL-20P prokMSA_id:139355 DQ167232.1 Thermococcus sp. str. NA1 prokMSA_id:144371 DQ228619.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH3a2 prokMSA_id:258065 DQ925861.1 Microbes and Thermal Gradients Temperature Hydrothermal Chimneys hydrothermal vent chimneys Guaymas Basin clone 147A38 prokMSA_id:330807 FJ182227.1 Thermococcus sp. str. AMT11 prokMSA_id:359894 NC_011529.1 Thermococcus onnurineus str. NA1 prokMSA_id:367012 CP000855.1 Thermococcus onnurineus str. NA1 prokMSA_id:373132 FN396976.1 Thermococcus sp. 'Bio 0405IT2' str. Bio pl 0405IT2 prokMSA_id:539026 NR_028179.1 Thermococcus thioreducens str. OGL-20P; ATCC BAA-394 1.3.8.1.1.4.2 s__Thermococcus acidaminovorans 3 seqs 1.3.8.1.1.4.2.190 OTU 3 seqs prokMSA_id:30578 AB055120.1 Thermococcus acidaminovorans str. DSM 11906 prokMSA_id:38459 AJ291807.1 Thermococcus acidaminovorans str. DSM 11906 prokMSA_id:105271 AY099170.1 Thermococcus acidaminovorans str. DSM 11906 1.3.8.1.1.4.3 s__Thermococcus fumicolans 3 seqs 1.3.8.1.1.4.3.191 OTU 3 seqs prokMSA_id:37193 AB055122.1 Thermococcus fumicolans str. JCM 10128 prokMSA_id:44360 AB055128.1 Thermococcus fumicolans str. ST557 prokMSA_id:106174 AY099176.1 Thermococcus fumicolans str. ST557 1.3.8.1.1.4.4 s__Thermococcus kodakarensis 5 seqs 1.3.8.1.1.4.4.192 OTU 5 seqs prokMSA_id:101915 AY099183.1 Thermococcus peptonophilus str. DSM 10343 prokMSA_id:111673 NC_006624.1 Thermococcus kodakaraensis str. KOD1 prokMSA_id:111918 AP006878.1 Thermococcus kodakaraensis str. KOD1 prokMSA_id:561663 NR_028193.1 Thermococcus peptonophilus str. OG-1; JCM 9653 prokMSA_id:562756 NR_028216.1 Thermococcus kodakarensis KOD1 str. KOD1;JCM 12380 1.3.8.1.1.4.5 s__Thermococcus pacificus 3 seqs 1.3.8.1.1.4.5.193 OTU 3 seqs prokMSA_id:21914 AB055124.1 Thermococcus pacificus str. JCM 10553 prokMSA_id:34206 AJ291811.1 Thermococcus pacificus str. DSM 10394 Type prokMSA_id:101759 AY099182.1 Thermococcus pacificus str. DSM 10394 1.3.8.1.1.4.6 s__Thermococcus siculi 4 seqs 1.3.8.1.1.4.6.194 OTU 4 seqs prokMSA_id:33045 AB055126.1 Thermococcus siculi str. DSM 12349 prokMSA_id:48271 AJ298870.1 Thermococcus siculi str. DSM 12349 prokMSA_id:48581 AJ291808.1 Thermococcus siculi str. DSM 12349 Type prokMSA_id:102226 AY099185.1 Thermococcus siculi str. DSM 12349 1.3.8.1.1.4.7 s__Thermococcus waiotapuensis 3 seqs 1.3.8.1.1.4.7.195 OTU 3 seqs prokMSA_id:19786 AB055127.1 Thermococcus waiotapuensis str. JCM 10985 prokMSA_id:102528 AY099187.1 Thermococcus waiotapuensis str. DSM 12768; WT1 prokMSA_id:554093 NR_028197.1 Thermococcus waiotapuensis str. WT1 DSM 12768 1.3.9 c__Thermoplasmata 614 seqs 1.3.9.1 o__E2 516 seqs 1.3.9.1.1 Unclassified 7 seqs 1.3.9.1.1.196 OTU 7 seqs prokMSA_id:99169 AY592255.1 deep-sea mud volcano clone Amsterdam-1A-26; BC20-1A-26 prokMSA_id:202209 DQ522944.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-32 prokMSA_id:251552 EU280189.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_B10 prokMSA_id:279707 EF687601.1 Biogeochemistry iron- and sulfur-precipitating microbial mats (Nile Mediterranean) sediment underneath iron-oxidizing mat Chefren mud volcano Nile Deep Sea Fan Eastern Mediterranean clone 113A21 prokMSA_id:286992 EF687642.1 Biogeochemistry iron- and sulfur-precipitating microbial mats (Nile Mediterranean) sediment underneath iron-oxidizing mat Chefren mud volcano Nile Deep Sea Fan Eastern Mediterranean clone 113A77 prokMSA_id:457105 FJ655585.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_B10 prokMSA_id:542257 GU190969.1 Spatial structure and activity sedimentary microbial underlying Beggiatoa spp. mat Gulf Mexico hydrocarbon seep marine sediment; 900 m water 0-24 cm sediment depth clone MatB0arc18 1.3.9.1.2 f__Marine group II 138 seqs 1.3.9.1.2.1 Unclassified 138 seqs 1.3.9.1.2.1.197 OTU 138 seqs prokMSA_id:305 AB019757.1 hydrothermal vent clone pIVWA104 prokMSA_id:713 U78206.1 marine planktonic clone SB95-72 prokMSA_id:715 AJ133625.1 hypersaline brine sediment clone KTK31A prokMSA_id:104364 AY534910.1 Antarctic polar front 500-m deep plankton clone cosmid DeepAnt-JyKC7 prokMSA_id:108930 AB193966.1 deep-sea vent clone SSM263-NA03 prokMSA_id:108941 AB193976.1 deep-sea vent clone SSM264-NA05 prokMSA_id:108943 AB193978.1 deep-sea vent clone Sd-NEA prokMSA_id:108950 AB193985.1 deep-sea vent clone SSM263-EA07 prokMSA_id:108960 AB193995.1 deep-sea vent clone Scd-NEA03 prokMSA_id:108962 AB193997.1 deep-sea vent clone SSM264-EA06 prokMSA_id:108963 AB193998.1 deep-sea vent clone Sd-EA02 prokMSA_id:109524 AY856358.1 2652m. clone CTD005-13A prokMSA_id:110125 AY856364.1 2652m. clone CTD005-1A prokMSA_id:110451 AY856357.1 2652m. clone CTD005-21A prokMSA_id:119305 AB213066.1 hydrothermal fluid clone FaswA09 prokMSA_id:141581 DQ228610.1 Microbial colonizing mineral surfaces within sulfide-microbial incubator clone CH1a7 prokMSA_id:145047 DQ156422.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_56E12 prokMSA_id:145075 DQ156436.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 200 m be sea surface clone fosmid HF200_15F06 prokMSA_id:145175 DQ300552.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_001H016 prokMSA_id:145192 DQ156383.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 10 m be sea surface clone fosmid HF10_24E03 prokMSA_id:145245 DQ156421.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_4G08 prokMSA_id:145259 DQ156435.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 200 m be sea surface clone fosmid HF200_103E03 prokMSA_id:145267 DQ156447.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 200 m be sea surface clone fosmid HF200_66A10 prokMSA_id:145274 DQ156424.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_6E07 prokMSA_id:145317 DQ156399.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 10 m be sea surface clone fosmid HF10_8H07 prokMSA_id:145367 DQ300564.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_15J24 prokMSA_id:145466 DQ156392.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 10 m be sea surface clone fosmid HF10_39E10 prokMSA_id:145469 DQ156475.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 70 m be sea surface clone fosmid HF70_89B11 prokMSA_id:145587 DQ156404.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_26G06 prokMSA_id:145692 DQ156431.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_90E09 prokMSA_id:145699 DQ156434.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 200 m be sea surface clone fosmid HF200_102F03 prokMSA_id:145800 DQ300554.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_010E09 prokMSA_id:145820 DQ156420.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_49F04 prokMSA_id:145892 DQ156398.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 10 m be sea surface clone fosmid HF10_73E12 prokMSA_id:145971 DQ156427.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_75B06 prokMSA_id:146167 DQ156457.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 500 m be sea surface clone fosmid HF500_22F05 prokMSA_id:146234 DQ156416.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_40B02 prokMSA_id:146266 DQ156466.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 70 m be sea surface clone fosmid HF70_105F02 prokMSA_id:146294 DQ156426.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_73G01 prokMSA_id:146318 DQ300549.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_045J12 prokMSA_id:146395 DQ156402.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_17D07 prokMSA_id:146399 DQ156411.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_33C02 prokMSA_id:146436 DQ156444.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 200 m be sea surface clone fosmid HF200_63E02 prokMSA_id:146447 DQ300563.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_37J21 prokMSA_id:146506 DQ156394.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 10 m be sea surface clone fosmid HF10_48G07 prokMSA_id:146513 DQ156388.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 10 m be sea surface clone fosmid HF10_30E08 prokMSA_id:146577 DQ156401.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_17B12 prokMSA_id:146685 DQ300562.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_27L10 prokMSA_id:146830 DQ156469.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 70 m be sea surface clone fosmid HF70_25A12 prokMSA_id:146866 DQ156443.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 200 m be sea surface clone fosmid HF200_50D06 prokMSA_id:146884 DQ156478.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 70 m be sea surface clone fosmid HF70_97E04 prokMSA_id:146898 DQ300556.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_023F22 prokMSA_id:146928 DQ156391.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 10 m be sea surface clone fosmid HF10_36B02 prokMSA_id:147038 DQ156453.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 200 m be sea surface clone fosmid HF200_89A11 prokMSA_id:147072 DQ156415.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_40B01 prokMSA_id:147132 DQ156460.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 500 m be sea surface clone fosmid HF500_26A05 prokMSA_id:147223 DQ156430.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_88G10 prokMSA_id:147224 DQ156419.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_44A02 prokMSA_id:147348 DQ156459.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 500 m be sea surface clone fosmid HF500_25E08 prokMSA_id:147366 DQ300555.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_020C12 prokMSA_id:147371 DQ156450.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 200 m be sea surface clone fosmid HF200_72A06 prokMSA_id:147413 DQ156472.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 70 m be sea surface clone fosmid HF70_48G03 prokMSA_id:147475 DQ156405.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_27A09 prokMSA_id:147490 DQ300551.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_001B05 prokMSA_id:147590 DQ156379.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 10 m be sea surface clone fosmid HF10_15F03 prokMSA_id:147601 DQ156437.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 200 m be sea surface clone fosmid HF200_25F07 prokMSA_id:147658 DQ156462.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 500 m be sea surface clone fosmid HF500_47D04 prokMSA_id:147734 DQ300550.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_046J19 prokMSA_id:147763 DQ300568.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_14F07 prokMSA_id:147814 DQ156407.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_29F10 prokMSA_id:147825 DQ156429.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_83E02 prokMSA_id:147929 DQ156465.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 500 m be sea surface clone fosmid HF500_67F10 prokMSA_id:147998 DQ156449.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 200 m be sea surface clone fosmid HF200_71A04 prokMSA_id:148220 DQ156410.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_32D03 prokMSA_id:148343 DQ300545.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_5L22 prokMSA_id:148347 DQ156417.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_40G07 prokMSA_id:148407 DQ156348.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 70 m be sea surface clone fosmid HF70_59C08 prokMSA_id:148537 DQ300557.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_030E05 prokMSA_id:148613 DQ156393.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 10 m be sea surface clone fosmid HF10_43A09 prokMSA_id:148773 DQ156423.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_67F08 prokMSA_id:148809 DQ156432.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_94A03 prokMSA_id:148926 DQ156412.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_34E01 prokMSA_id:149074 DQ300565.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_21J14 prokMSA_id:149264 DQ300566.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_2B10 prokMSA_id:149311 DQ156463.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 500 m be sea surface clone fosmid HF500_56B09 prokMSA_id:149368 DQ156454.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 200 m be sea surface clone fosmid HF200_97B09 prokMSA_id:149403 DQ156382.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 10 m be sea surface clone fosmid HF10_20F02 prokMSA_id:149525 DQ156461.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 500 m be sea surface clone fosmid HF500_30A08 prokMSA_id:149565 DQ156473.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 70 m be sea surface clone fosmid HF70_51B02 prokMSA_id:149626 DQ156428.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_76G06 prokMSA_id:149633 DQ156413.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_35A10 prokMSA_id:149637 DQ156425.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_71B05 prokMSA_id:149835 DQ300548.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_039K14 prokMSA_id:149855 DQ300567.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_2G08 prokMSA_id:149868 DQ156477.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 70 m be sea surface clone fosmid HF70_95E04 prokMSA_id:149900 DQ156408.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_30F08 prokMSA_id:149913 DQ156403.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_21B04 prokMSA_id:150045 DQ156455.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 500 m be sea surface clone fosmid HF500_100E05 prokMSA_id:150069 DQ156440.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 200 m be sea surface clone fosmid HF200_43D02 prokMSA_id:150096 DQ156433.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 200 m be sea surface clone fosmid HF200_101H01 prokMSA_id:150121 DQ156470.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 70 m be sea surface clone fosmid HF70_41E01 prokMSA_id:150202 DQ156458.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 500 m be sea surface clone fosmid HF500_24F01 prokMSA_id:150286 DQ156476.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 70 m be sea surface clone fosmid HF70_91G08 prokMSA_id:150358 DQ156452.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 200 m be sea surface clone fosmid HF200_84A01 prokMSA_id:150393 DQ156387.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 10 m be sea surface clone fosmid HF10_29E05 prokMSA_id:150470 DQ300558.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_037J18 prokMSA_id:155847 DQ299286.1 sponge clone A9D1 prokMSA_id:161415 DQ465919.1 n 'Korarchaeota water 0.2 um-filtered (after 1.0 um-prefiltering) surrounding 9 degrees North East Pacific Rise deep-sea hydrothermal vent Tica. This was obtained Dec 7 2002 Elevator 3 while on R/V Atlantis and DSV Alvin cruise -07 Leg 26 clone TFA3 prokMSA_id:190786 EF069336.1 Archaebacterial Antarctic Bathypelagic Sediments deep marine sediments depth:2164m clone PS2ARC29 prokMSA_id:235709 EF597716.1 Metagenomics deep mediterranean warm bathypelagic habitat 3010m depth Ionian Km3 Station Mediterranean Sea clone KM3-85-F5 prokMSA_id:238138 EF597686.1 Metagenomics deep mediterranean warm bathypelagic habitat 3010m depth Ionian Km3 Station Mediterranean Sea clone KM3-136-D10 prokMSA_id:240578 EF597715.1 Metagenomics deep mediterranean warm bathypelagic habitat 3010m depth Ionian Km3 Station Mediterranean Sea clone KM3-72-G2 prokMSA_id:243659 EF597683.1 Metagenomics deep mediterranean warm bathypelagic habitat 3010m depth Ionian Km3 Station Mediterranean Sea clone KM3-130-D10 prokMSA_id:250392 AB329815.1 Microbial southern Mariana trough hydrothermal deposits clone YS18As48 prokMSA_id:250570 EF597698.1 Metagenomics deep mediterranean warm bathypelagic habitat 3010m depth Ionian Km3 Station Mediterranean Sea clone KM3-201-B9 prokMSA_id:255494 AB329819.1 Microbial southern Mariana trough hydrothermal deposits clone YS18As57 prokMSA_id:280212 EU650238.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 041exp4 prokMSA_id:280654 EU650264.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C :26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 125exp5 prokMSA_id:280874 EU650251.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 297exp4 prokMSA_id:281997 EU650240.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 072exp4 prokMSA_id:282673 EU650242.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 074exp4 prokMSA_id:284705 EU650249.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 125exp4 prokMSA_id:284865 EU650257.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C :26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 099exp5 prokMSA_id:285041 EU650256.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C :26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 163exp5 prokMSA_id:303766 FJ002858.1 DES 3 cruise RV Pelagia on 0.2um Sterivex filter depth 7155m water mass: Antarctic Bottom Water (AABW) 1.42 salinity: 3475 pot temperature: 0.70 degrees C 27.87 kg/m3 concentration: 222.40 apparent oxygen utilization: 121.40 umol/kg clone A3_75_A1-1 prokMSA_id:308755 EU686643.2 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 1000m deep Adriatic Sea clone AD1000-18-D2 prokMSA_id:311706 FJ002864.1 DES 3 cruise RV Pelagia on 0.2um Sterivex filter depth 7155m water mass: Antarctic Bottom Water (AABW) 1.42 salinity: 3475 pot temperature: 0.70 degrees C 27.87 kg/m3 concentration: 222.40 apparent oxygen utilization: 121.40 umol/kg clone A3_75_A1-5 prokMSA_id:313185 EU556724.1 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic oceanic regions fosmid library DeepAnt 0.2-5 um-sized 500 m-deep plankton Antarctic Polar Front clone DeepAnt-15E7 prokMSA_id:315098 EU686618.2 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 3010m deep Ionian Sea clone KM3-72-G3 prokMSA_id:336851 FJ002860.1 DES 3 cruise RV Pelagia on 0.2um Sterivex filter depth 7155m water mass: Antarctic Bottom Water (AABW) 1.42 salinity: 3475 pot temperature: 0.70 degrees C 27.87 kg/m3 concentration: 222.40 apparent oxygen utilization: 121.40 umol/kg clone A3_75_A1-2 prokMSA_id:338236 EU686610.1 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 1000m deep South Atlantic clone SAT1000-15-B12 prokMSA_id:341882 EU686639.2 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 3010m deep Ionian Sea clone KM3-130-D10 prokMSA_id:344532 EU686634.1 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 3010m deep Ionian Sea clone KM3-136-D10 prokMSA_id:347219 FJ002867.1 ES 3 cruise RV Pelagia on 0.2um Sterivex filter depth 7155m water mass: Antarctic Bottom Water (AABW) 1.42 salinity: 3475 pot temperature: 0.70 degrees C 27.87 kg/m3 concentration: 222.40 apparent oxygen utilization: 121.40 umol/kg clone A3_75_A2-13 prokMSA_id:351294 EU686616.2 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 3010m deep Ionian Sea clone KM3-85-F5 prokMSA_id:513337 FJ487471.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediment clone SPG12_153_163_A7 prokMSA_id:513408 FJ487464.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediment clone SPG12_213_223_A78 prokMSA_id:559633 FJ487467.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediment clone SPG12_401_411_A49 1.3.9.1.3 f__Marine group III 28 seqs 1.3.9.1.3.198 OTU 28 seqs prokMSA_id:43663 AF257278.1 marine clone DH148-W24 prokMSA_id:109663 AY856362.1 2652m. clone CTD005-16A prokMSA_id:109822 AY856359.1 2652m. clone CTD005-22A prokMSA_id:110119 AY856361.1 2652m. clone CTD005-33A prokMSA_id:110525 AY856360.1 2652m. clone CTD005-2A prokMSA_id:111598 AY704382.1 oceanic crust clone CTD005-16A-02 prokMSA_id:120710 AB213108.1 hydrothermal fluid clone Papm3A90 prokMSA_id:120910 AB213106.1 hydrothermal fluid clone Papm3A76 prokMSA_id:124193 AB213107.1 hydrothermal fluid clone Papm3A78 prokMSA_id:146124 DQ156479.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 10 m be sea surface clone fosmid HF10_21C05 prokMSA_id:146439 DQ156483.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 500 m be sea surface clone fosmid HF500_17G02 prokMSA_id:147054 DQ300547.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_027O11 prokMSA_id:147380 DQ300572.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_031G22 prokMSA_id:148193 DQ300574.1 microbial ocean's interior amplicon single fosmid library d 4000m depth HOT station ALOHA 22.45 N 158 deg. W clone HF4000_27O11 prokMSA_id:148715 DQ156480.1 Proteorhodopsin lateral transfer between marine planktonic and Archaea North Pacific Subtropical Gyre (Hawaii) 130 m be sea surface clone fosmid HF130_95B02 prokMSA_id:149617 DQ300571.1 microbial ocean's interior amplicon single fosmid library d 770m depth HOT station ALOHA 22.45 N 158 deg. W clone HF770_031F22 prokMSA_id:240615 EF597702.1 Metagenomics deep mediterranean warm bathypelagic habitat 3010m depth Ionian Km3 Station Mediterranean Sea clone KM3-28-E8 prokMSA_id:249133 AB329792.1 Microbial southern Mariana trough hydrothermal deposits clone YS16As27 prokMSA_id:280910 EU650255.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C :26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 160exp5 prokMSA_id:284342 EU650258.1 2 cruise RV Pelagia on 0.2um Sterivex filter depth 249m water mass: North Atlantic Central Water (NACW) 15.90 salinity: 36.26 pot temperature: 15.86 degrees C :26.75 kg/m3 concentration: 183.9 apparent oxygen utilization: 57.52 umol/kg clone 186exp5 prokMSA_id:286428 EU650246.1 RV Pelagia on 0.2um Sterivex filter depth 2750m water mass: Middle North East Atlantic Deep Water (MNEADW) 2.92 salinity: 34.95 pot temperature: 2.70 degrees C 27.87 kg/m3 concentration: 230.9 apparent oxygen utilization: 95.24 umol/kg clone 108exp4 prokMSA_id:306098 EU686628.2 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 1000m deep Adriatic Sea clone AD1000-40-D7 prokMSA_id:307361 EU686632.2 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 1000m deep South Atlantic clone SAT1000-53-B3 prokMSA_id:312223 FJ002870.1 ES 3 cruise RV Pelagia on 0.2um Sterivex filter depth 7155m water mass: Antarctic Bottom Water (AABW) 1.42 salinity: 3475 pot temperature: 0.70 degrees C 27.87 kg/m3 concentration: 222.40 apparent oxygen utilization: 121.40 umol/kg clone A3_75_A2-28 prokMSA_id:330706 FJ002869.1 ES 3 cruise RV Pelagia on 0.2um Sterivex filter depth 7155m water mass: Antarctic Bottom Water (AABW) 1.42 salinity: 3475 pot temperature: 0.70 degrees C 27.87 kg/m3 concentration: 222.40 apparent oxygen utilization: 121.40 umol/kg clone A3_75_A2-19 prokMSA_id:336167 FJ002875.1 ES 3 cruise RV Pelagia on 0.2um Sterivex filter depth 7155m water mass: Antarctic Bottom Water (AABW) 1.42 salinity: 3475 pot temperature: 0.70 degrees C 27.87 kg/m3 concentration: 222.40 apparent oxygen utilization: 121.40 umol/kg clone A3_75_A1-39 prokMSA_id:341303 FJ002872.1 ES 3 cruise RV Pelagia on 0.2um Sterivex filter depth 7155m water mass: Antarctic Bottom Water (AABW) 1.42 salinity: 3475 pot temperature: 0.70 degrees C 27.87 kg/m3 concentration: 222.40 apparent oxygen utilization: 121.40 umol/kg clone A3_75_A2-35 prokMSA_id:342565 EU686636.2 Hindsight abundance metabolic potential and genome dynamics uncultivated marine archaea metagenomic analyses bathypelagic plankton oceanic regions 3010m deep Ionian Sea clone KM3-28-E8 1.3.9.1.4 f__MOB7-9 11 seqs 1.3.9.1.4.199 OTU 11 seqs prokMSA_id:158026 DQ004669.1 Microbial Reduce Methane Efflux Mud Volcano Sediments Gulf Cadiz marine hydrocarbon seep sediment clone CAVMV301A980 prokMSA_id:195551 DQ841244.1 Microbial deep subsurface gas- water Minami-kanto Japan natural gas field clone MOB7-9 prokMSA_id:199947 DQ640155.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-02 prokMSA_id:200869 DQ640156.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-10 prokMSA_id:201309 DQ522941.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-29 prokMSA_id:201596 DQ522928.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-06 prokMSA_id:261044 EU570118.1 Lipid biomarker analyses archaeal biodiversity hypersaline microbial mat and underlying sediment Pond 4 near 1 Guerrero Negro Baja California Sur clone C8_1D1 prokMSA_id:279877 EF687639.1 Biogeochemistry iron- and sulfur-precipitating microbial mats (Nile Mediterranean) sediment underneath iron-oxidizing mat Chefren mud volcano Nile Deep Sea Fan Eastern Mediterranean clone 113A73 prokMSA_id:324924 EU731612.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA03C11 prokMSA_id:331245 EU731616.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA03F06 prokMSA_id:548984 AM229249.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-83-630A 1.3.9.1.5 f__pMC2A33 125 seqs 1.3.9.1.5.200 OTU 125 seqs prokMSA_id:428 AB019737.1 hydrothermal vent clone pMC2A203 prokMSA_id:526 AF119123.1 deep-sea sediment clone CRA12-27cm prokMSA_id:73685 AF419643.1 Guaymas Basin hydrothermal sediment clone C1_R046 prokMSA_id:101667 AY592524.1 deep-sea mud volcano clone Napoli-3A-13; BC07-3A-13 prokMSA_id:101828 AY592525.1 deep-sea mud volcano clone Napoli-3A-17; BC07-3A-17 prokMSA_id:103569 AY592248.1 deep-sea mud volcano clone Amsterdam-1A-19; BC20-1A-19 prokMSA_id:105390 AJ578149.1 microbial mat clone BS-S-316 prokMSA_id:130088 DQ103679.1 hypersaline endoevaporitic microbial mat clone ArcC08 prokMSA_id:131074 DQ103673.1 hypersaline endoevaporitic microbial mat clone ArcG12 prokMSA_id:136106 DQ103671.1 hypersaline endoevaporitic microbial mat clone ArcH06 prokMSA_id:155086 AB252425.1 Microbial extremely CO2 rich deep-sea sediment Marine sediments Yonaguni Knoll IV hydrothermal field southern Okinawa Trough clone OT-A17.18 prokMSA_id:156771 DQ007533.1 Multiple archaeal groups control methane emissions North Sea pockmark marine hydrocarbon seep sediment clone Tommeliten_ARCH69FL prokMSA_id:157923 DQ004667.1 Microbial Reduce Methane Efflux Mud Volcano Sediments Gulf Cadiz marine hydrocarbon seep sediment clone CAVMV300A963 prokMSA_id:158371 DQ058805.1 Cultivation methanogens shal sediments Hydrate Ridge Oregon marine sediment clone HR-MM-005 prokMSA_id:158484 DQ382335.1 Cultivation methanogens shal sediments Hydrate Ridge Oregon marine sediment clone HR-MM-003 prokMSA_id:158701 DQ058802.1 Cultivation methanogens shal sediments Hydrate Ridge Oregon marine sediment clone HR-MM-001 prokMSA_id:160749 DQ521781.1 Anaerobic Methane Oxidizing ANME-1b Archaea Hypersaline Sediments Gulf Mexico sediments clone SMI1-GC205-Arc38 prokMSA_id:187160 DQ841232.1 Microbial deep subsurface gas- water Minami-kanto Japan natural gas field clone MOB7-10 prokMSA_id:199959 DQ522910.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-deep-18 prokMSA_id:200117 DQ640150.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-mid-07 prokMSA_id:200214 DQ640162.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-mid-45 prokMSA_id:200343 DQ640149.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-mid-31 prokMSA_id:200730 DQ640145.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-deep-03 prokMSA_id:201037 DQ522905.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-deep-9 prokMSA_id:201690 DQ640146.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-deep-27 prokMSA_id:201899 DQ640158.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-mid-17 prokMSA_id:202345 DQ640152.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-mid-21 prokMSA_id:202434 DQ640153.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-27 prokMSA_id:202462 DQ522908.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-deep-15 prokMSA_id:202764 DQ522937.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-21 prokMSA_id:202976 DQ522909.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-deep-17 prokMSA_id:203129 DQ522943.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-31 prokMSA_id:203370 DQ640151.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-mid-06 prokMSA_id:219191 DQ676278.1 Archaeal sediment and freshwater pond suboxic freshwater-pond plankton clone MVP-3A-10 prokMSA_id:223508 DQ676252.1 Archaeal sediment and freshwater pond suboxic freshwater-pond plankton clone MVP-7A-32 prokMSA_id:226084 DQ676244.1 Archaeal sediment and freshwater pond suboxic freshwater-pond plankton clone MVP-3A-9 prokMSA_id:237724 EU280217.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_10E3 prokMSA_id:238356 EU280220.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_10G2 prokMSA_id:242871 EU280223.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_10H5 prokMSA_id:245798 EU280221.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_10G7 prokMSA_id:254858 EU280215.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAT_10E1 prokMSA_id:256993 EU280200.1 'Candidatus Nitrosopumilus maritimus' Crenarchaeota Dominate Archaeal Salt Marsh Sediments salt marsh sediment clone HQSAS_D8 prokMSA_id:258365 EU570122.1 Lipid biomarker analyses archaeal biodiversity hypersaline microbial mat and underlying sediment Pond 4 near 1 Guerrero Negro Baja California Sur clone C8_1D8 prokMSA_id:258818 EU585962.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET5_1G7 prokMSA_id:259878 EU585937.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone EH2_1E11 prokMSA_id:260002 EU585956.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET5_1E12 prokMSA_id:260513 EU585939.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone EH2_1E5 prokMSA_id:260592 EU585959.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET5_1F7 prokMSA_id:261286 EU585963.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET5_1H5 prokMSA_id:261788 EU585955.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET5_1E1 prokMSA_id:265193 EU585936.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone EH2_1D8 prokMSA_id:265587 EU585958.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET5_1F2 prokMSA_id:267070 EU585948.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET2_1C11 prokMSA_id:267307 EU585947.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET2_1C10 prokMSA_id:267334 EU585964.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET5_1H6 prokMSA_id:268887 EU585957.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET5_1E7 prokMSA_id:274250 EU585966.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET5_1F6 prokMSA_id:276878 EU585945.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone ET2_1B12 prokMSA_id:284125 EF687634.1 Biogeochemistry iron- and sulfur-precipitating microbial mats (Nile Mediterranean) sediment underneath iron-oxidizing mat Chefren mud volcano Nile Deep Sea Fan Eastern Mediterranean clone 113A67 prokMSA_id:287611 AM745230.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch28 prokMSA_id:290895 AM745242.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch74 prokMSA_id:293849 AM745172.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Arch16 prokMSA_id:293944 AM745234.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch47 prokMSA_id:299208 AM745220.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch59 prokMSA_id:299490 AM745223.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch16 prokMSA_id:300096 AM745245.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM_GC232_4463_Arch84 prokMSA_id:319002 EU910622.1 Eukaryal and Archaeal Middle Island sinkhole (Lake Huron USA) sediment clone H5 prokMSA_id:379145 FJ655694.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3G8 prokMSA_id:384856 FJ655609.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_10E1 prokMSA_id:389053 FJ655611.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_10E3 prokMSA_id:393030 FJ655717.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3H2 prokMSA_id:394714 FJ655646.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3A1 prokMSA_id:407348 FJ655652.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3B11 prokMSA_id:410763 FJ655672.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3D6 prokMSA_id:411589 FJ655750.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SP_3F9 prokMSA_id:412056 FJ655683.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3F2 prokMSA_id:421839 FJ655614.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_10G2 prokMSA_id:424475 FJ655626.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3C10 prokMSA_id:428243 FJ655648.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3A6 prokMSA_id:438290 FJ655689.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3G11 prokMSA_id:441972 FJ655766.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_E5 prokMSA_id:447977 FJ655701.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_3B3 prokMSA_id:448133 FJ655617.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_10H5 prokMSA_id:448625 FJ655660.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3C10 prokMSA_id:463660 FJ655667.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3D11 prokMSA_id:463714 FJ655657.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3B6 prokMSA_id:464997 FJ655615.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_10G7 prokMSA_id:467265 FJ655596.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAS_D8 prokMSA_id:467470 FJ655671.1 Archaeal and Prevalence Crenarchaeota Salt Marsh Sediments salt marsh sediment clone SAT_3D5 prokMSA_id:514236 GU135479.1 archaeal Lake Pavin sediment (37 cm) clone Pav-sed-405 prokMSA_id:514750 FJ712393.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-30-A3 prokMSA_id:514950 FJ712372.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-5-A22 prokMSA_id:515698 FJ712380.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-10-A39 prokMSA_id:523247 GU135475.1 archaeal Lake Pavin sediment (37 cm) clone Pav-sed-401 prokMSA_id:528432 FJ712379.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-10-A11 prokMSA_id:530296 GU135480.1 archaeal Lake Pavin sediment (37 cm) clone Pav-sed-406 prokMSA_id:531588 FJ712383.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-25-A2 prokMSA_id:534738 GU190993.1 Spatial structure and activity sedimentary microbial underlying Beggiatoa spp. mat Gulf Mexico hydrocarbon seep marine sediment; 900 m water 0-24 cm sediment depth clone Edge0arc9 prokMSA_id:536619 AB525484.1 Segregated ANME-1 and -2 cold-seep marine sediments deep-sea methane seep sediment off Joetsu Japan Sea clone UT06_10_52A_35 prokMSA_id:541283 FN391210.2 prokaryotic sediments two Tunisian multipond solar saltern sediment clone 209ZF03 prokMSA_id:546805 AB525488.1 Segregated ANME-1 and -2 cold-seep marine sediments deep-sea methane seep sediment off Joetsu Japan Sea clone UT06_10_52A_47 prokMSA_id:549118 FJ477308.1 methanogenic archaea and isolation new Methanococcoides strain mangrove sediment clone MMS_204 prokMSA_id:550655 EU420693.1 Archaeal and Kao-Mei Wetland clone KM07-Da-2 prokMSA_id:550661 AM229247.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-83-585A prokMSA_id:551442 FN428822.1 Biomarker indicators anaerobic oxidizers diffusive methane fluxes brackish-marine sediments Aarhus Bay (Henry IV/04) clone Arch118 prokMSA_id:552392 AM229251.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-83-644A prokMSA_id:555193 FN391207.1 prokaryotic sediments two Tunisian multipond solar saltern sediment clone 209ZE11 prokMSA_id:555366 AM229248.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-83-611A prokMSA_id:555431 AM229257.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-84-240A prokMSA_id:556117 FN391214.2 prokaryotic sediments two Tunisian multipond solar saltern sediment clone 209ZC10 prokMSA_id:556325 AM229260.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-84-66A prokMSA_id:558062 FJ477320.1 methanogenic archaea and isolation new Methanococcoides strain mangrove sediment clone MMS_210 prokMSA_id:558673 AM229259.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-84-48A prokMSA_id:562477 GU363081.1 and archaeal biogeochemical cycling genes within Qiongdongnan basin Sea: pilot study microbial shifting marine sediment South China Sea clone BD72AR29 prokMSA_id:562622 FN391212.2 prokaryotic sediments two Tunisian multipond solar saltern sediment clone 209ZB04 prokMSA_id:564652 FJ477306.1 methanogenic archaea and isolation new Methanococcoides strain mangrove sediment clone MMS_104 prokMSA_id:567877 FJ685731.1 Study Prokaryotic Selected Niches Western Ghats India mangrove clone ACSAS2P1C3 prokMSA_id:569500 FN391209.2 prokaryotic sediments two Tunisian multipond solar saltern sediment clone 209ZC11 prokMSA_id:574769 FN429783.1 Biogeochemistry -activity cold seep Larsen B area western Weddell Sea Antarctica marine sediments (1.1 mbsf) 850 m water depth clone ANTXXIII_706-4_Arch265 prokMSA_id:580166 AM404410.1 Hydrocarbon-fueled sulfate reduction can sustain long-lived tubeworm aggregations cold seeps Gulf Mexico marine sediment clone GoM_SMBush4593_Arch142 prokMSA_id:583469 AM229239.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-83-602A prokMSA_id:584062 AM229233.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-83-542A prokMSA_id:589211 AB525483.1 Segregated ANME-1 and -2 cold-seep marine sediments deep-sea methane seep sediment off Joetsu Japan Sea clone UT06_10_52A_21 prokMSA_id:589477 FN429779.1 Biogeochemistry -activity cold seep Larsen B area western Weddell Sea Antarctica marine sediments (1.1 mbsf) 850 m water depth clone ANTXXIII_706-4_Arch92 prokMSA_id:593427 AB525485.1 Segregated ANME-1 and -2 cold-seep marine sediments deep-sea methane seep sediment off Joetsu Japan Sea clone UT06_10_52A_08 1.3.9.1.6 f__WCHD3-02 207 seqs 1.3.9.1.6.201 OTU 207 seqs prokMSA_id:712 AF050619.1 contaminated aquifer clone WCHD3-33 prokMSA_id:714 AJ133621.1 hypersaline brine sediment clone KTK4A prokMSA_id:722 AF050616.1 contaminated aquifer clone WCHD3-02 prokMSA_id:723 U81773.2 anaerobic digestor clone vadinDC79 prokMSA_id:34273 AB034186.1 rumen clone M2 prokMSA_id:44971 AB034187.1 rumen clone M1 prokMSA_id:45960 AF424770.1 municipal wastewater sludge clone 33-1 prokMSA_id:52339 AB034184.1 rumen clone M7 prokMSA_id:62881 AB077226.1 oil-contaminated groundwater clone KuA16 prokMSA_id:63282 AF523939.1 coal effluent wetland clone ARCP130 prokMSA_id:63283 AF523938.1 coal effluent wetland clone ARCP212 prokMSA_id:74993 AB062308.1 isolate xylophagous cockroach clone PA201 prokMSA_id:76146 AB062311.1 isolate xylophagous cockroach clone PA204 prokMSA_id:76707 AB062309.1 isolate xylophagous cockroach clone PA202 prokMSA_id:99334 AJ576219.1 landfill leachate clone GZK24 prokMSA_id:99429 AJ576232.1 landfill leachate clone GZK56 prokMSA_id:99875 AY351466.1 rumen fluid sheep grazing on forage clone CSIRO1.33 prokMSA_id:99897 AJ576235.1 landfill leachate clone GZK61 prokMSA_id:102838 AY351437.1 rumen fluid sheep grazing on forage clone CSIRO1.04 prokMSA_id:107533 AJ576214.1 landfill leachate clone GZK14 prokMSA_id:130029 DQ103683.1 hypersaline endoevaporitic microbial mat clone ArcA08 prokMSA_id:136107 AY816986.1 microbial pig manure storage pit clone DF86 prokMSA_id:139459 AB233298.1 Arcaheal methanogenic sludges UASB granular sludge clone CG-8 prokMSA_id:140729 AB237749.1 microorganisms deep subsurface groundwater sedimentary rock milieu clone HDBW-WA16 prokMSA_id:143408 DQ303248.1 Microbial ecology macroscopic filaments extreme Tinto River acidic river clone anta6 prokMSA_id:148487 DQ355967.1 Methanogen detection anaerobic fungal clone 2 prokMSA_id:148527 DQ355968.1 Methanogen detection anaerobic fungal clone 1 prokMSA_id:151435 AY995285.1 methanogens sheep Queensland Australia rumen clone CSIRO-QB06 prokMSA_id:151549 AY995281.1 methanogens sheep Queensland Australia rumen clone CSIRO-QB02 prokMSA_id:152142 AY995295.1 methanogens sheep Queensland Australia rumen clone CSIRO-QD03 prokMSA_id:152537 DQ372975.1 methanogens anaerobic fungal clone 6 prokMSA_id:152568 DQ402028.1 methanogens goat rumen clone 20 prokMSA_id:152715 DQ402031.1 methanogens goat rumen clone 23 prokMSA_id:152801 DQ402029.1 methanogens goat rumen clone 21 prokMSA_id:152841 DQ372972.1 methanogens anaerobic fungal clone 3 prokMSA_id:152856 AY995297.1 methanogens sheep Queensland Australia rumen clone CSIRO-QD06 prokMSA_id:152962 DQ402018.1 methanogens goat rumen clone 10 prokMSA_id:153066 AY995280.1 methanogens sheep Queensland Australia rumen clone CSIRO-QB01 prokMSA_id:153636 AY995288.1 methanogens sheep Queensland Australia rumen clone CSIRO-QB10 prokMSA_id:153675 AY995293.1 methanogens sheep Queensland Australia rumen clone CSIRO-QD01 prokMSA_id:153679 DQ402021.1 methanogens goat rumen clone 13 prokMSA_id:153778 AY995286.1 methanogens sheep Queensland Australia rumen clone CSIRO-QB07 prokMSA_id:153944 AY995300.1 methanogens sheep Queensland Australia rumen clone CSIRO-QD10 prokMSA_id:154146 DQ402033.1 methanogens goat rumen clone 25 prokMSA_id:154238 AY995275.1 methanogens sheep Queensland Australia rumen clone CSIRO-QA01 prokMSA_id:155055 AY995299.1 methanogens sheep Queensland Australia rumen clone CSIRO-QD09 prokMSA_id:155703 DQ402017.1 methanogens goat rumen clone 9 prokMSA_id:155874 AY995284.1 methanogens sheep Queensland Australia rumen clone CSIRO-QB05 prokMSA_id:155920 AY995282.1 methanogens sheep Queensland Australia rumen clone CSIRO-QB03 prokMSA_id:162522 DQ123888.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.18 prokMSA_id:164151 DQ123875.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.03 prokMSA_id:164223 DQ123879.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.09 prokMSA_id:164347 DQ123887.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.17 prokMSA_id:165214 DQ123872.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone PE-CAN.12 prokMSA_id:165671 DQ123861.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone PE-CAN.01 prokMSA_id:167219 DQ123870.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone PE-CAN.10 prokMSA_id:168832 DQ123868.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone PE-CAN.08 prokMSA_id:168934 DQ123884.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.14 prokMSA_id:169380 DQ123885.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.15 prokMSA_id:170941 DQ123862.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone PE-CAN.02 prokMSA_id:172335 DQ123874.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone ON-CAN.02 prokMSA_id:172435 DQ123869.1 Methanogen beef cattle two Canadian provinces Ontario and Prince Edward Island rumen clone PE-CAN.09 prokMSA_id:173952 EF055548.1 methanogens rumen Jinnan cattle clone LGMJN59 prokMSA_id:175061 EF055543.1 methanogens rumen Jinnan cattle clone LGMJN54 prokMSA_id:175466 EF055541.1 methanogens rumen Jinnan cattle clone LGMJN52 prokMSA_id:175748 EF157727.1 methanogens primers rumen Jinnan cattle clone JNC11 prokMSA_id:177330 EF055549.1 methanogens rumen Jinnan cattle clone LGMJN60 prokMSA_id:178088 EF055550.1 methanogens rumen Jinnan cattle clone LGMJN61 prokMSA_id:178660 DQ841233.1 Microbial deep subsurface gas- water Minami-kanto Japan natural gas field clone MOB7-11 prokMSA_id:179326 EF055552.1 methanogens rumen Jinnan cattle clone LGMJN63 prokMSA_id:179668 EF055535.1 methanogens rumen Jinnan cattle clone LGMJN46 prokMSA_id:180817 EF055558.1 methanogens rumen Jinnan cattle clone LGMJN69 prokMSA_id:181085 EF055553.1 methanogens rumen Jinnan cattle clone LGMJN64 prokMSA_id:184227 DQ985540.1 methanogenic Archaea co- anaerobic fungi goat rumen clone 4 prokMSA_id:184857 EF157726.1 methanogens primers rumen Jinnan cattle clone JNC10 prokMSA_id:185894 EF055554.1 methanogens rumen Jinnan cattle clone LGMJN65 prokMSA_id:186725 EF055545.1 methanogens rumen Jinnan cattle clone LGMJN56 prokMSA_id:187118 EF055557.1 methanogens rumen Jinnan cattle clone LGMJN68 prokMSA_id:187762 EF055536.1 methanogens rumen Jinnan cattle clone LGMJN47 prokMSA_id:188902 EF055544.1 methanogens rumen Jinnan cattle clone LGMJN55 prokMSA_id:189166 EF055547.1 methanogens rumen Jinnan cattle clone LGMJN58 prokMSA_id:191320 EF055537.1 methanogens rumen Jinnan cattle clone LGMJN48 prokMSA_id:193529 EF055540.1 methanogens rumen Jinnan cattle clone LGMJN51 prokMSA_id:195341 EF055556.1 methanogens rumen Jinnan cattle clone LGMJN67 prokMSA_id:195401 EF055546.1 methanogens rumen Jinnan cattle clone LGMJN57 prokMSA_id:196092 EF055542.1 methanogens rumen Jinnan cattle clone LGMJN53 prokMSA_id:196439 EF055539.1 methanogens rumen Jinnan cattle clone LGMJN50 prokMSA_id:197285 EF055559.1 methanogens rumen Jinnan cattle clone LGMJN70 prokMSA_id:198334 EF055551.1 methanogens rumen Jinnan cattle clone LGMJN62 prokMSA_id:200255 DQ522932.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-11 prokMSA_id:206080 AB294255.1 Microbial structure deep coal seem groundwater clone YWA07 prokMSA_id:207482 EF396247.1 microbial extremely acidic metal-rich stream massive sulfide (Huelva Spain) and their impact on water geochemistry abandoned copper mine drainage Odiel river basin clone ORCMO.26 prokMSA_id:208498 EF396245.1 microbial extremely acidic metal-rich stream massive sulfide (Huelva Spain) and their impact on water geochemistry abandoned copper mine drainage Odiel river basin clone ORCMO.17 prokMSA_id:211870 AB288248.1 Cultivation methanogens artesian spring and aquifers northern Japan enrichment deep subsurface groundwater sedimentary rock milieu clone HC-E2 prokMSA_id:213630 EF396246.1 microbial extremely acidic metal-rich stream massive sulfide (Huelva Spain) and their impact on water geochemistry abandoned copper mine drainage Odiel river basin clone ORCMO.1 prokMSA_id:216435 EF446193.1 Prokaryotic and Ecology Floating Macroscopic Filaments Extreme Acidic River Rio Tinto (SW Spain) floating macroscopic filaments acidic river clone antb9 prokMSA_id:231780 EF541187.1 archaea Jinnan cattle rumen clone 7 prokMSA_id:232357 EF541185.1 archaea Jinnan cattle rumen clone 5 prokMSA_id:234227 EF541182.1 archaea Jinnan cattle rumen clone 2 prokMSA_id:255410 AB262703.1 microorganisms shal subsurface Sarobetsu mire peat soil clone HSM050P--2 prokMSA_id:258430 EU413577.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE18 prokMSA_id:258561 EU413614.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetF24 prokMSA_id:258993 EU413618.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetF28 prokMSA_id:259152 EU413602.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetF4 prokMSA_id:260217 EU413575.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE16 prokMSA_id:262598 EU413597.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE46 prokMSA_id:262705 EU413611.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetF20 prokMSA_id:263235 EU413651.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetG29 prokMSA_id:263991 EU413656.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetG35 prokMSA_id:264106 EU413580.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE24 prokMSA_id:264367 EU413615.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetF25 prokMSA_id:266672 EU413649.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetG24 prokMSA_id:267661 EU413596.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE45 prokMSA_id:269291 EU413592.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE40 prokMSA_id:269725 EU413662.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetG41 prokMSA_id:272006 EU413587.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE32 prokMSA_id:272125 EU413639.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetG12 prokMSA_id:272282 EU413588.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE33 prokMSA_id:272480 EU413644.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetG18 prokMSA_id:273098 EU413578.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE21 prokMSA_id:273294 EU413612.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetF22 prokMSA_id:273331 EU413659.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetG38 prokMSA_id:273569 EU413594.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE43 prokMSA_id:274623 EU413617.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetF27 prokMSA_id:275031 EU413576.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE17 prokMSA_id:277257 EU413582.1 Ecology Methanogens and Ciliates Reindeer Rumen rumen Svalbard reindeer clone SRmetE26 prokMSA_id:281602 EU662682.1 Microbial -temperature sludges sludge manure pit clone S13 prokMSA_id:282332 EU662689.1 Microbial -temperature sludges sludge manure pit clone T8 prokMSA_id:282634 EU662692.1 Microbial -temperature sludges sludge manure pit clone T19 prokMSA_id:284456 EU662666.1 Microbial -temperature sludges sludge manure pit clone F20 prokMSA_id:284532 EU662670.1 Microbial -temperature sludges sludge manure pit clone P18 prokMSA_id:284810 EU662675.1 Microbial -temperature sludges sludge manure pit clone P57 prokMSA_id:286035 EF687521.1 Biogeochemistry iron- and sulfur-precipitating microbial mats (Nile Mediterranean) sediment underneath sulfide-oxidizing mat Chefren mud volcano Nile Deep Sea Fan Eastern Mediterranean clone 104A10 prokMSA_id:303651 EU831337.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.16 prokMSA_id:305125 EU831357.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.36 prokMSA_id:305512 FJ205778.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A66 prokMSA_id:307026 EU831363.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.42 prokMSA_id:307325 EU831332.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.11 prokMSA_id:308597 EU831358.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.37 prokMSA_id:308642 EU831336.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.15 prokMSA_id:309366 EU831330.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.09 prokMSA_id:311480 EU831348.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.27 prokMSA_id:311717 EU831328.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.07 prokMSA_id:314392 FJ205769.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A36 prokMSA_id:314534 FJ205805.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone E19 prokMSA_id:316741 EU831346.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.25 prokMSA_id:319571 EU831334.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.13 prokMSA_id:321193 EU831351.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.30 prokMSA_id:322297 FJ205782.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A80 prokMSA_id:323796 EU831331.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.10 prokMSA_id:325589 EU831355.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.34 prokMSA_id:326252 EU831367.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.46 prokMSA_id:326647 EU831339.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.18 prokMSA_id:326952 EU831365.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.44 prokMSA_id:327530 EU831359.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.38 prokMSA_id:327972 EU831369.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.02 prokMSA_id:329648 EU910624.1 Eukaryal and Archaeal Middle Island sinkhole (Lake Huron USA) sediment clone G16 prokMSA_id:330865 EU831324.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.03 prokMSA_id:330877 EU831329.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.08 prokMSA_id:332319 EU831343.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.22 prokMSA_id:333798 EU831323.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.02 prokMSA_id:334628 EU831345.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.24 prokMSA_id:334947 EU831340.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.19 prokMSA_id:335134 EU831341.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.20 prokMSA_id:335687 EU831352.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.31 prokMSA_id:336595 EU831354.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.33 prokMSA_id:336690 EU831333.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.12 prokMSA_id:338060 EU831335.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.14 prokMSA_id:339655 FJ205760.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A15 prokMSA_id:341955 EU831338.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.17 prokMSA_id:341965 EU831326.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.05 prokMSA_id:342563 EU831361.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.40 prokMSA_id:342709 EU831344.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.23 prokMSA_id:343414 EU831353.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.32 prokMSA_id:344264 FJ205762.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone A21 prokMSA_id:344728 EU831342.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.21 prokMSA_id:345017 EU831360.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.39 prokMSA_id:346406 EU831368.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-MAY.01 prokMSA_id:346438 EU831350.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.29 prokMSA_id:346850 EU831347.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.26 prokMSA_id:347723 EU831327.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.06 prokMSA_id:347836 EU831366.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.45 prokMSA_id:350081 EU831325.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.04 prokMSA_id:351166 EU831364.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.43 prokMSA_id:351765 EU831322.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.01 prokMSA_id:354310 EU831349.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.28 prokMSA_id:354812 EU831362.1 and Archaea Foregut Tammar Wallaby (Macropus eugenii) foregut clone TW-NOV.41 prokMSA_id:509309 FJ919272.1 mechanism methanogenesis rumen clone M23 prokMSA_id:536805 AB541731.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_37 prokMSA_id:538447 FJ919269.1 mechanism methanogenesis rumen clone M20 prokMSA_id:544078 AB541811.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_49 prokMSA_id:544958 AB541678.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_40 prokMSA_id:547371 AB479397.1 Isolation Methanomicrobiales methanogen mesophilic methanogenic granular sludge clone SMS-sludge-6 prokMSA_id:550024 FJ919264.1 mechanism methanogenesis rumen clone M15 prokMSA_id:553182 AB541679.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_41 prokMSA_id:558427 AB541729.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_35 prokMSA_id:565570 AB541813.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_51 prokMSA_id:567801 AB541681.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_43 prokMSA_id:569447 FJ919273.1 mechanism methanogenesis rumen clone M24 prokMSA_id:569573 AB541730.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_36 prokMSA_id:570725 GQ365371.1 Reduction accumulated volatile fatty acids acetate-degrading enrichment 1L labscale inoculated anaerobic digester sludge clone 1C prokMSA_id:575148 AB541812.1 Changes archaeal structure during composting process cattle manure compost clone K09_10_50 prokMSA_id:578039 FJ938082.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 6 prokMSA_id:579981 AB541677.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_39 prokMSA_id:580576 AB541728.1 Changes archaeal structure during composting process cattle manure compost clone K09_2_34 prokMSA_id:581819 AB541680.1 Changes archaeal structure during composting process cattle manure compost clone K09_0_42 prokMSA_id:584138 FJ938102.1 Effect dietary tea saponin and soybean oil have on methanogenesis growing rumen fluid Huzhou lambs clone 26 1.3.9.2 o__Thermoplasmatales 98 seqs 1.3.9.2.1 Unclassified 20 seqs 1.3.9.2.1.202 OTU 20 seqs prokMSA_id:56630 AF544223.1 acid mine drainage clone AS4 prokMSA_id:58153 AF544222.1 acid mine drainage clone ASL32 prokMSA_id:58154 AF544224.1 acid mine drainage clone ASL1 prokMSA_id:58156 AF544219.1 acid mine drainage clone AS1 prokMSA_id:63279 AF523940.1 coal effluent wetland clone ARCP128 prokMSA_id:63280 AF523936.1 coal effluent wetland clone ARCP121 prokMSA_id:63281 AF523937.1 coal effluent wetland clone ARCP127 prokMSA_id:71237 AF523941.1 coal effluent wetland clone ARCP160 prokMSA_id:141956 DQ303252.1 Microbial ecology macroscopic filaments extreme Tinto River acidic river clone ant d5 prokMSA_id:142157 DQ303249.1 Microbial ecology macroscopic filaments extreme Tinto River acidic river clone ant b7 prokMSA_id:143671 DQ303254.1 Microbial ecology macroscopic filaments extreme Tinto River acidic river clone ant g4 prokMSA_id:144011 DQ303253.1 Microbial ecology macroscopic filaments extreme Tinto River acidic river clone ant g10 prokMSA_id:205614 EF446197.1 Prokaryotic and Ecology Floating Macroscopic Filaments Extreme Acidic River Rio Tinto (SW Spain) floating macroscopic filaments acidic river clone antb5 prokMSA_id:209344 EF446196.1 Prokaryotic and Ecology Floating Macroscopic Filaments Extreme Acidic River Rio Tinto (SW Spain) floating macroscopic filaments acidic river clone antb10 prokMSA_id:213250 EF446195.1 Prokaryotic and Ecology Floating Macroscopic Filaments Extreme Acidic River Rio Tinto (SW Spain) floating macroscopic filaments acidic river clone antarqa7 prokMSA_id:217102 EF396244.1 microbial extremely acidic metal-rich stream massive sulfide (Huelva Spain) and their impact on water geochemistry abandoned copper mine drainage Odiel river basin clone ORCL3.3 prokMSA_id:359907 EU370310.1 structure photosynthetic complex biofilm acidophilic streams Rio Tinto (SW Spain) extreme acidic river mean pH 2.3 and concentration heavy metals clone AG_Eug_f6 prokMSA_id:368917 EU370308.1 structure photosynthetic complex biofilm acidophilic streams Rio Tinto (SW Spain) extreme acidic river mean pH 2.3 and concentration heavy metals clone CEM_Pin_e2 prokMSA_id:369925 EU370309.1 structure photosynthetic complex biofilm acidophilic streams Rio Tinto (SW Spain) extreme acidic river mean pH 2.3 and concentration heavy metals clone CEM_Pin_c1a prokMSA_id:546356 GU229859.1 Biodiversity and Geochemistry Extremely Acidic Temperature Subterranean Sustained Chemolithotrophy acid water pool abandoned Cae Coch pyrite mine clone S4BAC1 1.3.9.2.2 f__Aciduliprofundaceae 13 seqs 1.3.9.2.2.203 OTU 13 seqs prokMSA_id:14 AF068820.2 hydrothermal vent clone VC2.1 Arc13 prokMSA_id:719 AB019740.1 hydrothermal vent clone pSSMCA108 prokMSA_id:731 AB019741.1 hydrothermal vent clone pISA12 prokMSA_id:732 AB019742.1 hydrothermal vent clone pISA42 prokMSA_id:103775 AY251064.1 deep-sea hydrothermal biofilm Edmond vent field on Central Indian Ridge clone FT17A03 prokMSA_id:103916 AY251065.2 deep-sea hydrothermal biofilm Edmond vent field on Central Indian Ridge clone FT17A09 prokMSA_id:139281 DQ082976.1 40 kbp uncultivated euryarchaeotal fosmid microbial polychaete annelid Alvinella pompejana deep sea hydrothermal vent 13 degree North EPR clone FOS3 prokMSA_id:139379 DQ118403.1 hyperthermophilic lifestyle Archaea DHVE2 lineage: evidence deep sea hydrothermal vent 13 degree North EPR clone fosmid Alv-FOS1 prokMSA_id:154697 DQ118404.1 hyperthermophilic lifestyle Archaea DHVE2 lineage: evidence deep sea hydrothermal vent 13 degree North EPR clone fosmid Alv-FOS4 prokMSA_id:156356 DQ082975.1 40 kbp uncultivated euryarchaeotal fosmid microbial polychaete annelid Alvinella pompejana deep sea hydrothermal vent 13 degree North EPR clone FOS2 prokMSA_id:161417 DQ451875.1 Aciduliprofundum boonei str. T469 prokMSA_id:216978 AB293234.1 Microbial structures around area Southern Mariana Trough hydrothermal sulfide structure clone Pcsc1A38 prokMSA_id:527781 CP001941.1 Aciduliprofundum boonei str. T469 1.3.9.2.3 f__Ferroplasmaceae 18 seqs 1.3.9.2.3.1 g__Ferroplasma 18 seqs 1.3.9.2.3.1.1 Unclassified 9 seqs 1.3.9.2.3.1.1.204 OTU 9 seqs prokMSA_id:29649 AF232925.1 hot spring clone MS14 prokMSA_id:111333 AY830840.1 Ferroplasma sp. str. JTC3 prokMSA_id:113856 AY907888.1 Ferroplasma cyprexacervatum str. BH2 prokMSA_id:131730 AABC04000003.1 Ferroplasma acidarmanus str. Fer1 prokMSA_id:133209 NZ_AABC04000003.1 Ferroplasma acidarmanus str. Fer1 prokMSA_id:142354 DQ303256.1 Microbial ecology macroscopic filaments extreme Tinto River acidic river clone ant h4 prokMSA_id:143985 DQ303255.1 Microbial ecology macroscopic filaments extreme Tinto River acidic river clone ant h10 prokMSA_id:252629 EF062309.2 Ferroplasma sp. str. L1 prokMSA_id:589149 AM943980.1 Acidiplasma aeolicum str. DSM 18409 = JCM 146 V 1.3.9.2.3.1.2 s__Ferroplasma acidiphilum 9 seqs 1.3.9.2.3.1.2.205 OTU 9 seqs prokMSA_id:720 AJ224936.1 Ferroplasma acidiphilum str. DSM 12658 Y prokMSA_id:65352 AF513710.1 Ferroplasma sp. str. MT17 prokMSA_id:85217 AY222042.2 Ferroplasma acidiphilum str. DR1 prokMSA_id:142132 DQ303251.1 Microbial ecology macroscopic filaments extreme Tinto River acidic river clone ant c8 prokMSA_id:144347 DQ303250.1 Microbial ecology macroscopic filaments extreme Tinto River acidic river clone ant c7 prokMSA_id:205568 EF446198.1 Prokaryotic and Ecology Floating Macroscopic Filaments Extreme Acidic River Rio Tinto (SW Spain) floating macroscopic filaments acidic river clone antc8 prokMSA_id:319201 FJ206236.1 Dominance Acidithiobacillus sp. -grade copper bioleaching heap clone GJ1 prokMSA_id:560212 FJ216447.1 Microbial experimental chalcopyrite columns bioleaching column leachate clone AC1 prokMSA_id:587890 FJ216448.1 Microbial experimental chalcopyrite columns bioleaching column leachate clone AC8 1.3.9.2.4 f__M5 29 seqs 1.3.9.2.4.206 OTU 29 seqs prokMSA_id:32461 AF325184.1 hot spring clone A10 prokMSA_id:99470 AY627860.1 thermoacidic hot spring clone M8 prokMSA_id:99628 AY627861.1 thermoacidic hot spring clone M17 prokMSA_id:99780 AY627862.1 thermoacidic hot spring clone M50 prokMSA_id:104320 AY627856.1 thermoacidic hot spring clone M4 prokMSA_id:104481 AY627857.1 thermoacidic hot spring clone M5 prokMSA_id:104777 AY627859.1 thermoacidic hot spring clone M7 prokMSA_id:112103 AY882761.3 hot spring clone SK207 prokMSA_id:112414 AY882711.3 hot spring clone SK154 prokMSA_id:140353 DQ179033.2 Geochemical Controls on Microbial Population Rainbow and Joseph's Coat Hot Springs Yellowstone National Park hot springs water clone SK347 prokMSA_id:161987 DQ833993.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK632 prokMSA_id:162632 DQ833943.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK582 prokMSA_id:162928 DQ834004.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK643 prokMSA_id:163197 DQ833944.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK583 prokMSA_id:164593 DQ833992.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK631 prokMSA_id:165550 DQ833890.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK529 prokMSA_id:165880 DQ834017.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK656 prokMSA_id:166279 DQ834005.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK644 prokMSA_id:167178 DQ833988.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK627 prokMSA_id:167425 DQ834003.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK642 prokMSA_id:167477 DQ833940.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK579 prokMSA_id:169375 DQ833994.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK633 prokMSA_id:169601 DQ833941.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK580 prokMSA_id:170268 DQ833891.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK530 prokMSA_id:172091 DQ833991.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK630 prokMSA_id:173665 DQ834015.1 Geochemical Controls on Microbial Population Rainbow and Springs Yellowstone National Park Joseph's Coat 3 Hot Spring clone SK654 prokMSA_id:509712 FJ797333.1 Planktonic and bottom-dwelled microbial -temperature sulfuric ponds Tatung Volcano area northern Taiwan acidic hot spring water clone LH2wa_26 prokMSA_id:510693 FJ797326.1 Planktonic and bottom-dwelled microbial -temperature sulfuric ponds Tatung Volcano area northern Taiwan acidic hot spring sediment clone LH2sa_01 prokMSA_id:544688 FJ797338.1 Planktonic and bottom-dwelled microbial -temperature sulfuric ponds Tatung Volcano area northern Taiwan acidic hot spring water clone LH2wa_65 1.3.9.2.5 f__Picrophilaceae 4 seqs 1.3.9.2.5.1 g__Picrophilus 4 seqs 1.3.9.2.5.1.207 OTU 4 seqs prokMSA_id:710 X84901.1 Picrophilus oshimae prokMSA_id:104684 NC_005877.1 Picrophilus torridus str. DSM 9790 prokMSA_id:111898 AE017261.1 Picrophilus torridus str. DSM 9790 prokMSA_id:566282 NR_026246.1 Picrophilus oshimae str. KAW2/2; DSM 9789 1.3.9.2.6 f__Thermoplasmataceae 14 seqs 1.3.9.2.6.1 g__Thermoplasma 14 seqs 1.3.9.2.6.1.1 Unclassified 8 seqs 1.3.9.2.6.1.1.208 OTU 8 seqs prokMSA_id:721 M38637.1 Thermoplasma acidophilum str. 122-1B2 prokMSA_id:47977 NC_002578.1 Thermoplasma acidophilum str. DSM 1728 prokMSA_id:92226 AY350610.1 Thermoplasma sp. clone 739-a8 prokMSA_id:92375 AY350606.1 Thermoplasma sp. clone 739-a1 prokMSA_id:93086 AY350607.1 Thermoplasma sp. clone 739-a6 prokMSA_id:184571 AB262008.1 Thermoplasma sp. str. S01 prokMSA_id:510970 FJ797315.1 Planktonic and bottom-dwelled microbial -temperature sulfuric ponds Tatung Volcano area northern Taiwan acidic hot spring sediment clone HS4sa_03 prokMSA_id:588640 FJ216446.1 Microbial experimental chalcopyrite columns bioleaching column leachate clone AC6 1.3.9.2.6.1.2 s__Thermoplasma volcanium 6 seqs 1.3.9.2.6.1.2.209 OTU 6 seqs prokMSA_id:27173 AF339746.1 Thermoplasma volcanium str. GSS1; DSM 4299 prokMSA_id:46145 NC_002689.2 Thermoplasma volcanium str. GSS1 prokMSA_id:47351 AJ299215.1 Thermoplasma volcanium str. GSS1 prokMSA_id:68998 AP000996.2 Thermoplasma volcanium str. GSS1 prokMSA_id:112073 BA000011.4 Thermoplasma volcanium str. GSS1 prokMSA_id:542651 NR_028185.1 Thermoplasma volcanium str. GSS1; DSM 4299 1.4 p__HydGC-84-221A 3 seqs 1.4.210 OTU 3 seqs prokMSA_id:536258 GU190973.1 Spatial structure and activity sedimentary microbial underlying Beggiatoa spp. mat Gulf Mexico hydrocarbon seep marine sediment; 900 m water 0-24 cm sediment depth clone MatB0arc25 prokMSA_id:554170 GU190985.1 Spatial structure and activity sedimentary microbial underlying Beggiatoa spp. mat Gulf Mexico hydrocarbon seep marine sediment; 900 m water 0-24 cm sediment depth clone Edge0arc2 prokMSA_id:591676 AM229255.1 Microbial vicinity and within hydrates Hydrate Ridge (Cascadia Margin) marine gas hydrate bearing subsurface sediment clone HydGC-84-221A 1.5 p__Nanoarchaeota 3 seqs 1.5.211 OTU 3 seqs prokMSA_id:66763 AJ318041.1 Nanoarchaeum equitans str. Kin4-M prokMSA_id:125020 NC_005213.1 Nanoarchaeum equitans str. Kin4-M prokMSA_id:135883 AE017199.1 Nanoarchaeum equitans Kin4-M 1.6 p__pMC2A15 7 seqs 1.6.212 OTU 7 seqs prokMSA_id:108925 AB193961.1 deep-sea vent clone Ma-NA02 prokMSA_id:200115 DQ640157.1 Archaea sediments Skan Bay Alaska ing cultivated methanogens and description Methanogenium boonei sp. nov marine sediment clone SBAK-shal-04 prokMSA_id:269089 EU585938.1 spatial methanogens and methanogenic biosignatures mats Baja California hypersaline microbial mat concentrating area 4 located Exportadora De Sal S.. (ESSA) clone EH2_1E3 prokMSA_id:331094 FJ002865.1 DES 3 cruise RV Pelagia on 0.2um Sterivex filter depth 7155m water mass: Antarctic Bottom Water (AABW) 1.42 salinity: 3475 pot temperature: 0.70 degrees C 27.87 kg/m3 concentration: 222.40 apparent oxygen utilization: 121.40 umol/kg clone A3_75_A1-6 prokMSA_id:356489 FJ002861.1 ES 3 cruise RV Pelagia on 0.2um Sterivex filter depth 7155m water mass: Antarctic Bottom Water (AABW) 1.42 salinity: 3475 pot temperature: 0.70 degrees C 27.87 kg/m3 concentration: 222.40 apparent oxygen utilization: 121.40 umol/kg clone A3_75_A1-30 prokMSA_id:509222 FJ571654.1 Archaeal surface sediments Pacific Arctic Ocean marine sediment P13; brown clay; 447 depth clone P13-3a prokMSA_id:569329 FJ487462.1 Archaeal oligotrophic sediments: South Pacific Gyre abyssal marine sediment clone SPG12_213_223_A25 1.7 p__pMC2A384 13 seqs 1.7.213 OTU 13 seqs prokMSA_id:200845 DQ397346.1 Guerrero Negro hypersaline microbial mat clone 02N1AG3 prokMSA_id:305301 EU731563.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05F02 prokMSA_id:306552 EU731520.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05H03 prokMSA_id:307310 EU731567.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05D11 prokMSA_id:309439 EU731515.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA09C05 prokMSA_id:316249 EU731561.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA06D01 prokMSA_id:316268 EU731495.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05F08 prokMSA_id:330146 EU731562.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05F03 prokMSA_id:335524 EU731543.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05B02 prokMSA_id:341214 EU731532.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA07B01 prokMSA_id:343178 EU731566.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA05C01 prokMSA_id:346282 EU731522.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA07D08 prokMSA_id:354287 EU731547.1 and stratification Archaea mat hypersaline microbial mat: Guerrero Negro pond 4 near 5 clone GNA04A08 2 k__Bacteria 400569 seqs 2.1 Unclassified 19 seqs 2.1.214 OTU 19 seqs prokMSA_id:1251 U05662.1 Yellowstone hot spring clone EM 19 prokMSA_id:13724 AF015925.1 hot spring clone OctSpA1-106 prokMSA_id:16693 AF352537.1 hot spring clone BH81 prokMSA_id:27351 AB077817.1 Thermodesulfobium narugense prokMSA_id:112352 AF419683.1 Guaymas Basin hydrothermal sediment clone CS_B017 prokMSA_id:139838 AB237732.1 microorganisms deep subsurface groundwater sedimentary rock milieu clone HDBW-WB69 prokMSA_id:149399 DQ324889.1 Geochemical and bioenergetic variability across systems Yellowstone National Park geothermal system clone GAL39 prokMSA_id:239967 EU043224.1 uncultivated soil clone BJ-169 prokMSA_id:243448 EU245051.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H1-A08 prokMSA_id:254851 EU134434.1 tallgrass prarie soil clone FFCH11147 prokMSA_id:261462 EU386097.1 Biogeographical and microbes sediments on subseafloor sediment South China Sea clone MD2900-B24 prokMSA_id:265422 EU386046.1 Biogeographical and microbes sediments on subseafloor sediment South China Sea clone MD2898-B2 prokMSA_id:272230 EU385775.1 Stratified microbes sediments Core MD05-2896 subseafloor sediment South China Sea clone MD2896-B188 prokMSA_id:274043 EU385812.1 Stratified microbes sediments Core MD05-2896 subseafloor sediment South China Sea clone MD2896-B236 prokMSA_id:520644 GU444082.1 Effects amendments on fertility and microbial structure cucumber Cucumis sativus L. production systems cotton straw treated soil clone 0-174 prokMSA_id:542527 CU923697.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560552 FJ516972.1 semiarid 'Tablas de Daimiel National Park' wetland (Central Spain) unravelled upper sediment clone TDNP_USbc97_59_2_150 prokMSA_id:564165 FJ484817.1 microbial autonomous rover world's deepest phreatic sinkhole wall biomat El Zacaton 4m depth clone Z4MB18 prokMSA_id:567096 FJ746261.1 Microbial oligotrophic marine sediments: South Pacific Gyre ocean sediment 5306 m water depth during Cruise Knox02rr clone SPG12_273_283_B13 2.10 p__BH1 7 seqs 2.10.1229 OTU 7 seqs prokMSA_id:199821 DQ243737.1 Archaeal and Geochemically Hot Springs Yellowstone National Park USA Bison Pool clone YNP_BP_B68 prokMSA_id:200861 AF352532.1 Microbial Near-Boiling Silica-Depositing Thermal Springs throughout Black Pool 85#C sediment West Thumb Geyser Basin Yellowstone National Park clone BH1 prokMSA_id:202103 AY862060.1 Hydrogen and bioenergetics Yellowstone geothermal ecosystem Washburn Spring 3 clone WB3B031 prokMSA_id:250980 EU156156.1 thermal spring microbial and functional genes Coffee Pots Hot Spring clone pCOF_65.7_Toll prokMSA_id:326167 EU924256.1 Microbiology and geochemistry Little Hot Creek hot spring sediment temperature 80 degrees C clone LHC4_L4_E12 prokMSA_id:561015 FN545881.2 un 2 Rupi basin Bulgaria hot spring clone S2R-127 prokMSA_id:584616 FN545879.2 un 2 Rupi basin Bulgaria hot spring clone S2R-116 2.11 p__BRC1 51 seqs 2.11.1 Unclassified 2 seqs 2.11.1.1230 OTU 2 seqs prokMSA_id:63284 AF523935.1 forested wetland clone RCP2-18 prokMSA_id:591575 GU172181.1 Microbial Eucalyptus plantation soil clone DSM-R9 2.11.2 c__09D2Y74 36 seqs 2.11.2.1231 OTU 36 seqs prokMSA_id:159193 DQ330726.1 Guerrero Negro hypersaline microbial mat clone 09D2Y74 prokMSA_id:159295 DQ330721.1 Guerrero Negro hypersaline microbial mat clone 08D2Z83 prokMSA_id:237283 EU246057.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P2-E10 prokMSA_id:238437 EU245415.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M1-D04 prokMSA_id:242019 EU245553.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-A03 prokMSA_id:253575 EF648019.1 dynamics during produced water treatment aerobic activated sludge clone HB5 prokMSA_id:256192 EU245441.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M1-F06 prokMSA_id:509667 GQ356171.1 biomarkers ammonia oxidation activity anaerobic ammonium-oxidation (Anammox) bio-reactor clone 5GA_Pla_HKP_24 prokMSA_id:511727 FJ902782.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N71 prokMSA_id:512599 GQ356191.1 biomarkers ammonia oxidation activity anaerobic ammonium-oxidation (Anammox) bio-reactor clone 5GA_Pla_HKP_45 prokMSA_id:513329 FJ485075.1 microbial autonomous rover world's deepest phreatic sinkhole biomat El Zacaton 114m depth clone Z114MB88 prokMSA_id:535818 FJ902736.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N21 prokMSA_id:538021 GQ356174.1 biomarkers ammonia oxidation activity anaerobic ammonium-oxidation (Anammox) bio-reactor clone 5GA_Pla_HKP_27 prokMSA_id:544131 FJ902745.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N3 prokMSA_id:545972 FJ902764.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N51 prokMSA_id:549916 FJ902791.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N80 prokMSA_id:550648 FJ902770.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N58 prokMSA_id:551137 FJ902747.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N31 prokMSA_id:553102 FJ577893.1 microbial structure anaerobic ammonia oxidation (ANAMMOX) ANAMMOX bioreactor clone ana_SBR_JJY_44 prokMSA_id:556206 GQ356155.1 biomarkers ammonia oxidation activity anaerobic ammonium-oxidation (Anammox) bio-reactor clone 5GA_Pla_HKP_08 prokMSA_id:561460 FJ902790.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N8 prokMSA_id:561726 FJ902777.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N67 prokMSA_id:569362 FJ902738.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N23 prokMSA_id:576748 FJ902788.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N78 prokMSA_id:578352 FJ902737.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N22 prokMSA_id:579204 FJ902775.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N62 prokMSA_id:579835 FJ902752.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N38 prokMSA_id:581362 FJ902797.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N9 prokMSA_id:582161 FJ902753.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N39 prokMSA_id:582163 GQ356162.1 biomarkers ammonia oxidation activity anaerobic ammonium-oxidation (Anammox) bio-reactor clone 5GA_Pla_HKP_15 prokMSA_id:588327 FJ902751.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N37 prokMSA_id:589068 FJ902786.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N75 prokMSA_id:591359 FJ902785.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N74 prokMSA_id:591855 FJ902756.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N42 prokMSA_id:592721 FJ902740.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N25 prokMSA_id:594244 FJ902796.1 phreatic limestone sinkholes northeastern Mexico wall biomat >195m deep cenote Zacaton clone AG3N88 2.11.3 c__PRR-11 13 seqs 2.11.3.1232 OTU 13 seqs prokMSA_id:30354 AJ390445.1 soil clone PBS-II-34 prokMSA_id:39225 AJ390481.1 rice roots clone PRR-11 prokMSA_id:74751 AF445671.1 travertine hot spring clone SM1D02 prokMSA_id:82144 AY218548.1 penguin droppings sediments clone KD1-1 prokMSA_id:103366 AJ604544.1 Collembola-associated clone za47 prokMSA_id:143475 AB240228.1 microbial structure rhizosphere Phragmites bulk soil reed bed reactor laboratory clone BS013 prokMSA_id:152394 DQ395923.1 deep-sea octacoral clone ctg_CGOF313 prokMSA_id:239678 EU135576.1 tallgrass prarie soil clone FFCH11095 prokMSA_id:247643 EF157182.1 Microbial natural asphalts rancho la brea heavy oil seeps Rancho La Brea tar pits clone 101-106 prokMSA_id:255060 EU181485.1 Prokaryotic enhanced organic matter remineralization continental margin marine sediments clone 10BAV_D8_ready prokMSA_id:261758 EU385882.1 Stratified microbes sediments Core MD05-2902 subseafloor sediment South China Sea clone MD2902-B63 prokMSA_id:272799 EU385926.1 Stratified microbes sediments Core MD05-2902 subseafloor sediment South China Sea clone MD2902-B131 prokMSA_id:351030 EU369122.1 libraries oyster shell clone MBIOS-06 2.12 p__Caldiserica 77 seqs 2.12.1233 OTU 77 seqs prokMSA_id:1688 AJ133617.1 brine sediment clone KTK 32 prokMSA_id:2660 AF050594.1 contaminated aquifer clone WCHB1-03 prokMSA_id:13775 AJ133616.1 brine sediment clone KTK 27 prokMSA_id:13776 AJ133619.1 brine sediment clone KTK 41 prokMSA_id:22143 AJ347771.1 brine-seawater interface clone ST-3K7 group prokMSA_id:32063 AJ347773.2 brine-seawater interface clone ST-12K21 group prokMSA_id:32158 AJ347772.1 brine-seawater interface clone ST-3K22 group prokMSA_id:36070 AF255600.1 hot spring clone SRI-280 prokMSA_id:40722 AJ347769.1 brine-seawater interface clone ST-12K35 group prokMSA_id:42260 AJ347770.1 brine-seawater interface clone ST-3K6 group prokMSA_id:62668 AF507893.1 Mono Lake at depth 35m station 6 July 2000 clone ML635J-28 G+C prokMSA_id:71654 AF419685.1 Guaymas Basin hydrothermal sediment clone CS_B038 prokMSA_id:91613 AY340822.1 sulfate-reducing fluidized-bed reactor clone SR_FBR_E18 prokMSA_id:102619 AY592687.1 deep-sea mud volcano clone Napoli-3B-11; BC07-3B-11 prokMSA_id:104504 AY592724.1 deep-sea mud volcano clone Napoli-3B-57; BC07-3B-57 prokMSA_id:104942 AY592727.1 deep-sea mud volcano clone Napoli-3B-60; BC07-3B-60 prokMSA_id:137052 AY605161.1 temporal variation Spirochetal mats Ebro and Camargue s microbial mat clone LF045 prokMSA_id:155382 AB252429.1 Microbial extremely CO2 rich deep-sea sediment Marine sediments Yonaguni Knoll IV hydrothermal field southern Okinawa Trough clone OT-B07.11 prokMSA_id:159066 DQ329841.1 Guerrero Negro hypersaline microbial mat clone 062DZ45 prokMSA_id:159164 DQ329842.1 Guerrero Negro hypersaline microbial mat clone 062DZ04 prokMSA_id:159265 DQ329840.1 Guerrero Negro hypersaline microbial mat clone 062DZ08 prokMSA_id:159380 DQ329850.1 Guerrero Negro hypersaline microbial mat clone 072DZ43 prokMSA_id:160004 AM268242.1 Microbial hydrothermal vent deep-sea anoxic brine lake Eastern mud volcano Urania Basin Mediterranean Sea clone UMP-07B prokMSA_id:160216 DQ521806.1 Anaerobic Methane Oxidizing ANME-1b Archaea Hypersaline Sediments Gulf Mexico sediments clone SMI1-GC205-Bac93 prokMSA_id:160462 DQ521805.1 Anaerobic Methane Oxidizing ANME-1b Archaea Hypersaline Sediments Gulf Mexico sediments clone SMI1-GC205-Bac98 prokMSA_id:160707 AY862796.2 prokaryotic genetic Salar de Atacama Northern Chile athalassohaline lake water clone At12OctB7 prokMSA_id:162883 DQ463697.2 distinct Lake Tanganyika anoxic hypolimnion clone TK-SH1 prokMSA_id:190832 EF029852.1 microbial anaerobic sludge dimethyl phthalate degrading UASB reactor clone DMPU-92 prokMSA_id:201890 DQ329853.1 Guerrero Negro hypersaline microbial mat clone 10D2Z09 prokMSA_id:202056 DQ329839.1 Guerrero Negro hypersaline microbial mat clone 05D2Z16 prokMSA_id:202436 DQ329836.1 Guerrero Negro hypersaline microbial mat clone 04D2Z63 prokMSA_id:202958 EF106489.1 microbial two endoevaporitic salt crusts evaporitic crust Guerrero Negro Baja clone 2P84 prokMSA_id:203467 DQ329852.1 Guerrero Negro hypersaline microbial mat clone 09D2Z79 prokMSA_id:217919 EF515667.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 31g06 prokMSA_id:227180 EF515591.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 30f03 prokMSA_id:239346 EU181497.1 Prokaryotic enhanced organic matter remineralization continental margin marine sediments clone 11bavF8ready prokMSA_id:246314 EU246019.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P1-F02 prokMSA_id:251185 EU181498.1 Prokaryotic enhanced organic matter remineralization continental margin marine sediments clone 8bav_F9_arb prokMSA_id:253189 EU181501.1 Prokaryotic enhanced organic matter remineralization continental margin marine sediments clone 5BAV_A4arb prokMSA_id:254219 EU156145.1 thermal spring microbial and functional genes Coffee Pots Hot Spring clone pCOF_65.7_B9 prokMSA_id:262018 EU522662.1 hydrocarbon-degrading methanogenic microbial consortia settling basin Northern Alberta Canada oil sands tailings enrichment clone Ctrl2-2D prokMSA_id:265544 EU385673.1 Stratified microbes sediments Core MD05-2896 subseafloor sediment South China Sea clone MD2896-B51 prokMSA_id:269354 EU542528.1 Effects chemical structure concentration on pathways microbial during dechlorination coplanar PCBs slurries sediment and soil slurry clone Er-LLAYS-82 prokMSA_id:283847 EF687264.1 Biogeochemistry iron- and sulfur-precipitating microbial mats (Nile Mediterranean) sediment underneath sulfide-oxidizing mat Chefren mud volcano Nile Deep Sea Fan Eastern Mediterranean clone 104B330 prokMSA_id:284592 EU644109.1 and Samoylov Island Lena active layer -centred polygon near permafrost table; Rim_Bottom clone LD_RB_36 prokMSA_id:321552 AB428365.1 First cultivation and ecological investigation affiliated candidate phylum OP5 springs hot spring isolate AZM16c01filamentous str. AZM16c01 prokMSA_id:344869 EU981282.1 sulfate reducing living bench scale aquifer column water clone A32_SW prokMSA_id:349253 EU638713.1 Ecological Role Firmicutes Identified Thermophilic Microbial Fuel Cells thermophilic microbial fuel cell open circuit control clone SHBZ1169 prokMSA_id:511355 GQ246316.1 Temporal and spatial China North Yel Sea sediments clone Sd1-35 prokMSA_id:522383 GU390767.1 Dark hot springs: structure biofilms caves Acquasanta Terme (Italy) sulfidic cave stream biofilm clone AS077_B61 prokMSA_id:532900 FJ799125.1 Microbial Responsible Intermediates Degradation Anaerobic Digestion System Determined anaerobic digestion systems containing butyrate inoculated sludge cassava wastewater treatment plant clone BA129 prokMSA_id:538588 CU922950.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542949 CU918486.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544562 CU918114.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547075 GU180194.1 Impact coplanar PCBs on microbial activity anaerobic estuarine sediments sediment and soil slurry clone Er-LAYS-100 prokMSA_id:548006 CU917614.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548718 CU924128.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549905 FJ455895.1 Variations archaeal and sulfate-methane transition zone continental margin sediments (Santa Barbara Basin California) marine sediment clone B103H06 prokMSA_id:552766 FN393496.1 prokaryotic sediments two Tunisian multipond sediment solar saltern clone SFD1H101 prokMSA_id:553381 CU923188.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553681 FJ375457.1 T-RFLP powerful tool rapid assessment cells microbial fuel cell sheet carbon cloth anode clone ACS44 prokMSA_id:553687 CU918318.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554237 CU921123.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558714 CU918183.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559236 CU918291.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559685 CU921754.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560338 CU921665.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:561830 CU917564.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562733 CU925017.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563699 FN393494.1 prokaryotic sediments two Tunisian multipond sediment solar saltern clone SFD1F101 prokMSA_id:564818 CU918178.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:568588 CU922097.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:569310 CU922043.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573749 CU920721.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574987 CU921157.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575964 CU918505.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:588200 FN429790.1 Biogeochemistry -activity cold seep Larsen B area western Weddell Sea Antarctica marine sediments (1.1 mbsf) 850 m water depth clone ANTXXIII_706-4_Bac50 2.13 p__Caldithrix_KSB1 68 seqs 2.13.1 c__c5LKS36 28 seqs 2.13.1.1234 OTU 28 seqs prokMSA_id:149924 AM086123.1 Abundance and archaea mesotrophic Lake Kinneret lake profundal sediment clone c5LKS36 prokMSA_id:159076 DQ329544.1 Guerrero Negro hypersaline mat clone 05D2Z52 prokMSA_id:159125 DQ329546.1 Guerrero Negro hypersaline microbial mat clone 062DZ06 prokMSA_id:159197 DQ329567.1 Guerrero Negro hypersaline microbial mat clone 08D2Z50 prokMSA_id:159273 DQ329568.1 Guerrero Negro hypersaline microbial mat clone 09D2Z61 prokMSA_id:159285 DQ329545.1 Guerrero Negro hypersaline microbial mat clone 062DZ77 prokMSA_id:159334 DQ329542.1 Guerrero Negro hypersaline microbial mat clone 05D2Z93 prokMSA_id:159505 DQ329541.1 Guerrero Negro hypersaline microbial mat clone 05D2Z11 prokMSA_id:162879 DQ811937.1 mangrove soil clone MSB-5B5 prokMSA_id:237663 EU246164.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P4-E12 prokMSA_id:240577 EU246318.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P6-G12 prokMSA_id:246894 EU246196.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P5-B01 prokMSA_id:250805 EU246084.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P3-A07 prokMSA_id:253294 EU245241.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H4-F06 prokMSA_id:257343 EU245986.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P1-B05 prokMSA_id:260984 EU491267.1 Abundance and microbial life ocean crust seafloor lavas Loi'hi Seamount Pisces Peak X2 clone P9X2b2H08 prokMSA_id:262829 EU491442.1 Abundance and microbial life ocean crust seafloor lavas Hawai'i South Point X4 clone P0X4b3C05 prokMSA_id:266775 EU491353.1 Abundance and microbial life ocean crust seafloor lavas Hawai'i South Point X3 clone P0X3b5D09 prokMSA_id:273907 EU407206.1 household biogas digester clone GW-22 prokMSA_id:274600 EU491414.1 Abundance and microbial life ocean crust seafloor lavas Hawai'i South Point X4 clone P0X4b3E07 prokMSA_id:346244 EU617724.1 Seasonal variation microbial Yel Sea sediment clone C13S-9 prokMSA_id:513424 FJ484430.1 microbial autonomous rover world's deepest phreatic sinkhole wall biomat El Zacaton 17m depth clone Z17M26B prokMSA_id:529594 FJ712497.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-10-B3 prokMSA_id:546625 AM997407.1 and biogeography deep-sea surface sediments South Ocean Atlantic Ocean:South-Atlantic OceanAngola Basin clone Ucn15732 prokMSA_id:556690 FJ484523.1 microbial autonomous rover world's deepest phreatic sinkhole wall biomat El Zacaton 53m depth clone Z53M45B prokMSA_id:563134 CU922004.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:566342 FJ484771.1 microbial autonomous rover world's deepest phreatic sinkhole wall biomat El Zacaton 195m depth clone Z195MB58 prokMSA_id:583042 FJ902136.1 phreatic limestone sinkholes northeastern Mexico orange biomat 8m deep cenote Caracol clone CaraOM8 2.13.2 c__Caldithrixae 19 seqs 2.13.2.1 o__Caldithrixales 19 seqs 2.13.2.1.1235 OTU 19 seqs prokMSA_id:24135 AJ430587.1 Caldithrix abyssi prokMSA_id:31738 AF286031.1 saltmarsh clone LCP-26 prokMSA_id:53652 AF323775.1 benzoate-degrading consortium clone BA059 prokMSA_id:101254 AY280423.1 exterior deep-sea hydrothermal vent sulfide chimney Juan de Fuca Ridge Pacific Ocean clone prokMSA_id:130950 AB177153.1 seafloor methane hydrate clone ODP1230B14.21 prokMSA_id:158348 DQ415763.1 Microbial populations limestone-corroding biofilms system Italy Frasassi sulfidic cave stream biofilm clone WM37 prokMSA_id:164927 DQ811935.1 mangrove soil clone MSB-4E9 prokMSA_id:171914 DQ811933.1 mangrove soil clone MSB-4A2 prokMSA_id:199479 EF125409.1 soil naked tidal flat sediment near mangrove clone MSB-1E7 prokMSA_id:378810 FJ999729.1 Caldithrix sp. str. MC prokMSA_id:523998 FJ712590.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-25-B57 prokMSA_id:535486 EU487880.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_1C1_24 prokMSA_id:543260 EU592472.1 Seasonal changes Salton Sea hypersaline sediment clone SSS10A prokMSA_id:550182 FJ484504.1 microbial autonomous rover world's deepest phreatic sinkhole wall biomat El Zacaton 53m depth clone Z53M17B prokMSA_id:557748 FJ873371.1 Vertical and archaea methane-rich cold seep located base sediments Okhotsk Sea clone bOHTK-110 prokMSA_id:558716 EU487899.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_1C1_42 prokMSA_id:565473 EU487910.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_1C1_8 prokMSA_id:575437 NR_028969.1 Caldithrix abyssi str. LF13; DSM 13497 prokMSA_id:581301 AB530234.1 Monitoring Suez and Tokyo bays based on analyses marine sediment clone Tokyo..Bac.34 2.13.3 c__GOUTA4 15 seqs 2.13.3.1236 OTU 15 seqs prokMSA_id:95866 AJ543759.1 anoxic sediment Lake Cadagno clone 49 prokMSA_id:106690 AY050577.1 MCB-contaminated groundwater-treating reactor clone GOUTA4 prokMSA_id:143463 AB240362.1 microbial structure Phragmites rhizosphere biofilm reed bed reactor laboratory clone RB384 prokMSA_id:225464 AB300086.1 Wide ancient microbial DNAs Quaternary sediments holocene mud sediment clone AMG24B-07 prokMSA_id:241799 EU134902.1 tallgrass prarie soil clone FFCH17431 prokMSA_id:248928 EU134900.1 tallgrass prarie soil clone FFCH18260 prokMSA_id:249081 EU134904.1 tallgrass prarie soil clone FFCH18804 prokMSA_id:255428 EU134903.1 tallgrass prarie soil clone FFCH6465 prokMSA_id:255924 EU134901.1 tallgrass prarie soil clone FFCH3687 prokMSA_id:513019 FJ485341.1 microbial autonomous rover world's deepest phreatic sinkhole wall biomat El Zacaton 273m depth clone Z273MBM14 prokMSA_id:515827 FJ793165.1 Archaea and Hot Spring Thailand Tao Dam hot spring clone TDB34 prokMSA_id:526431 GQ339156.1 Comprehensive Investigation on Iron Cycling Freshwater Seep ing Microscopy Cultivation and iron(II)-rich seep clone -57 prokMSA_id:556167 FJ484484.1 microbial autonomous rover world's deepest phreatic sinkhole wall biomat El Zacaton 17m depth clone Z17M83B prokMSA_id:567970 FJ901586.1 phreatic limestone sinkholes northeastern Mexico biomat 30m deep cenote La Palita clone LP30MUD30 prokMSA_id:576066 FJ902103.1 phreatic limestone sinkholes northeastern Mexico orange biomat 8m deep cenote Caracol clone CaraOM4 2.13.4 c__LCP-89 6 seqs 2.13.4.1237 OTU 6 seqs prokMSA_id:26077 AF286032.1 saltmarsh clone LCP-89 prokMSA_id:246605 EU048684.1 and archaeal surface marine sediment Slope South China Sea clone MD2896-B27 prokMSA_id:261859 EU386122.1 Biogeographical and microbes sediments on subseafloor sediment South China Sea clone MD2905-B10 prokMSA_id:532343 FJ712479.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-5-B66 prokMSA_id:551134 FJ716279.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B44 prokMSA_id:562251 FJ716412.1 Uncultivated archaea sulfate-reducing biofilm Frasassi cave system anoxic lake water clone FL0428B_PF64 2.14 p__Candidatus Poribacteria 10 seqs 2.14.1238 OTU 10 seqs prokMSA_id:101238 AY485286.1 marine sponge clone 174 prokMSA_id:101576 AY485288.1 marine sponge clone 214 prokMSA_id:101752 AY485289.1 marine sponge clone 236 prokMSA_id:111621 AY485282.1 marine sponge clone 96 prokMSA_id:111664 AY485280.1 marine sponge clone 3 prokMSA_id:111938 AY485287.1 marine sponge clone 212 prokMSA_id:151718 AY713479.1 first genome fragment marine sponge- candidate phylum Poribacteria transposase synthetase medium oxidoreductase large and putative MaoD-like protein genes co clone 64K2 prokMSA_id:536466 FJ652532.1 aerobic and anaerobic ammonia-oxidizing marine sponges Atlantic Ocean water column clone SWB-Pla-31 prokMSA_id:581084 FJ652465.1 aerobic and anaerobic ammonia-oxidizing sponges marine sponge clone -Pla-32 prokMSA_id:591856 FJ652464.1 aerobic and anaerobic ammonia-oxidizing sponges marine sponge clone -Pla-04 2.15 p__CCM11b 1 seq 2.15.1239 OTU 1 seq prokMSA_id:569418 FJ479322.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p8c18ok 2.16 p__Chlamydiae 216 seqs 2.16.1 c__Chlamydiae (class) 216 seqs 2.16.1.1 Unclassified 3 seqs 2.16.1.1.1240 OTU 3 seqs prokMSA_id:293434 EU473572.1 Evolution mammals and their gut microbes Somali wild ass feces clone WA_aaa01f12 prokMSA_id:312632 EU844128.1 metagenomics random sampling pyrosequencing rumen fluid fiber adherent microbiome steer 64; 6 week 1 hour after feeding clone 1103200820242 prokMSA_id:354398 FJ172861.1 Qinghai Yak Ruminal and Fungi China rumen clone RB-5B9 2.16.1.2 o__Chlamydiales 213 seqs 2.16.1.2.1 Unclassified 9 seqs 2.16.1.2.1.1241 OTU 9 seqs prokMSA_id:152262 DQ124300.1 Criblamydia sequanensis str. CRIB-18 prokMSA_id:171324 DQ444442.1 Anaerobic ammonium oxidation tropical freshwater system (Lake Tanganyika) fresh water lake clone LT110PlE2 prokMSA_id:320922 EU074225.1 Estrella lausannensis str. CRIB 30 prokMSA_id:535088 FJ976097.1 Detection Chlamydiae amoeba and mixed co freshwater isolate cvE21Chlamydiales str. cvE21 prokMSA_id:552935 EU363464.1 Biodiversity amoebae-resisting water-treatment plant biofilm (water network) isolate 32Chlamydiales str. CRIB 32 prokMSA_id:555349 FJ976096.1 Detection Chlamydiae freshwater amoeba and mixed co fountain isolate cvE16Chlamydiales str. cvE16 prokMSA_id:583814 AF448722.3 New chlamydial lineages s freshwater clone cvE6 prokMSA_id:584073 AF448723.3 New chlamydial lineages s freshwater clone cvE9 prokMSA_id:588661 FJ976095.1 Detection Chlamydiae amoeba and mixed co freshwater isolate cvE41Chlamydiales str. cvE41 2.16.1.2.2 f__Chlamydiaceae 133 seqs 2.16.1.2.2.1 Unclassified 2 seqs 2.16.1.2.2.1.1242 OTU 2 seqs prokMSA_id:158932 DQ011662.1 Chlamydia sp. CH301104 prokMSA_id:270252 EF577392.1 'Candidatus Clavochlamydia salmonicola': intracellular infecting salmonid fish gills 2.16.1.2.2.2 g__Chlamydia 49 seqs 2.16.1.2.2.2.1 Unclassified 1 seq 2.16.1.2.2.2.1.1243 OTU 1 seq prokMSA_id:19114 E17345.1 Chlamydia trachomatis MoPn/Weiss-Nigg 2.16.1.2.2.2.2 s__Chlamydia muridarum 5 seqs 2.16.1.2.2.2.2.1244 OTU 5 seqs prokMSA_id:3042 U68437.2 Chlamydia muridarum str. SFPD prokMSA_id:84873 NC_002620.2 Chlamydia muridarum Nigg str. MoPn prokMSA_id:128860 NC_002620.2 Chlamydia muridarum Nigg str. MoPn prokMSA_id:151827 AE002160.2 Chlamydia muridarum str. Nigg prokMSA_id:151828 AE002160.2 Chlamydia muridarum str. Nigg 2.16.1.2.2.2.3 s__Chlamydia suis 6 seqs 2.16.1.2.2.2.3.1245 OTU 6 seqs prokMSA_id:3024 U73110.2 Chlamydia suis str. S45 prokMSA_id:3025 U68420.2 Chlamydia suis str. R22 prokMSA_id:103253 AY661794.1 Chlamydia suis str. 13VII prokMSA_id:103405 AY661795.1 Chlamydia suis str. 14V prokMSA_id:103676 AY661797.1 Chlamydia suis str. 32XII prokMSA_id:585684 NR_029196.1 Chlamydia suis str. S45; ATCC VR-1474 2.16.1.2.2.2.4 s__Chlamydia trachomatis 37 seqs 2.16.1.2.2.2.4.1246 OTU 37 seqs prokMSA_id:2955 U68443.2 Chlamydia trachomatis str. L2/434/BU; ATCC VR-902B prokMSA_id:3009 D89067.1 Chlamydia trachomatis str. HAR-13 prokMSA_id:3010 D88316.1 Chlamydia trachomatis str. .SA-1.OT prokMSA_id:3011 D85719.1 Chlamydia trachomatis str. B/TW-5/OT prokMSA_id:49665 E17344.1 Chlamydia trachomatis A/Har-13T prokMSA_id:50790 NC_000117.1 Chlamydia trachomatis str. D/UW-3/CX prokMSA_id:128226 DQ019302.1 Chlamydia trachomatis str. G/UW-57 prokMSA_id:128281 DQ019301.1 Chlamydia trachomatis str. F/IC-CAL3 prokMSA_id:128339 DQ019306.1 Chlamydia trachomatis str. J/UW-36 prokMSA_id:128406 DQ019307.1 Chlamydia trachomatis str. K/UW-31 prokMSA_id:128411 DQ019300.1 Chlamydia trachomatis str. E/Bour prokMSA_id:129163 NC_000117.1 Chlamydia trachomatis str. D/UW-3/CX prokMSA_id:129338 DQ019292.1 clone 2 prokMSA_id:129351 DQ019295.1 Chlamydia trachomatis str. Ba/Apache-2 prokMSA_id:129719 DQ019310.1 Chlamydia trachomatis str. L4/404 prokMSA_id:129912 DQ019303.1 Chlamydia trachomatis str. H/UW-4 prokMSA_id:130298 DQ019293.1 Chlamydia trachomatis str. B/Tunis-864 prokMSA_id:130675 DQ019291.1 clone 1 prokMSA_id:131149 DQ019298.1 Chlamydia trachomatis str. D/UW-3 prokMSA_id:132667 DQ019294.1 Chlamydia trachomatis str. B/TW-5 prokMSA_id:133008 DQ019305.1 Chlamydia trachomatis str. Ia/870 prokMSA_id:133184 DQ019299.1 Chlamydia trachomatis str. D/IC-CAL8 prokMSA_id:133215 DQ019304.1 Chlamydia trachomatis str. I/UW-12 prokMSA_id:134460 DQ019296.1 clone 1 prokMSA_id:137556 DQ019297.1 Evolution Chlamydiae Chlamydia trachomatis strain C/TW-3 clone 2 prokMSA_id:138576 DQ019308.1 Chlamydia trachomatis str. L1/440 prokMSA_id:140360 CP000051.1 Chlamydia trachomatis str. /HAR-13 prokMSA_id:140361 CP000051.1 Chlamydia trachomatis str. /HAR-13 prokMSA_id:140389 NC_007429.1 Chlamydia trachomatis str. /HAR-13 prokMSA_id:140390 NC_007429.1 Chlamydia trachomatis str. /HAR-13 prokMSA_id:146817 AE001273.1 Chlamydia trachomatis str. D/UW-3/CX prokMSA_id:146822 AE001273.1 Chlamydia trachomatis str. D/UW-3/CX prokMSA_id:152240 DQ019309.1 Chlamydia trachomatis str. L2/434 prokMSA_id:517756 FN652779.2 Chlamydia trachomatis str. Sweden2 prokMSA_id:517757 FN652779.2 Chlamydia trachomatis str. Sweden2 prokMSA_id:554246 NZ_ABYG01000001.1 Chlamydia trachomatis 70s prokMSA_id:554247 NZ_ABYG01000001.1 Chlamydia trachomatis 70s 2.16.1.2.2.3 g__Chlamydophila 82 seqs 2.16.1.2.2.3.1 Unclassified 20 seqs 2.16.1.2.2.3.1.1247 OTU 20 seqs prokMSA_id:2961 AB001809.1 Chlamydophila psittaci str. Prk46 prokMSA_id:2962 AB001810.1 Chlamydophila psittaci str. Prk48 prokMSA_id:2963 AB001811.1 Chlamydophila psittaci str. Prk49 prokMSA_id:2987 AB001802.1 Chlamydophila psittaci str. PgAu46 prokMSA_id:2996 AB001814.1 Chlamydophila psittaci str. T3 prokMSA_id:3000 U68447.2 Chlamydophila psittaci str. 6BC; ATCC VR-125 prokMSA_id:3019 U68419.2 Chlamydophila psittaci str. turkey strain NJ1; Tk-NJ prokMSA_id:25134 E17341.1 Chlamydia psittaci Gp/Ic prokMSA_id:36508 E17340.1 Chlamydia psittaci Prk/Daruma prokMSA_id:36991 E17343.1 Chlamydia pecorum Bo/Maeda prokMSA_id:44021 E17339.1 Chlamydia psittaci Prt/GCP1 prokMSA_id:83486 NC_003361.3 Chlamydophila caviae GPIC prokMSA_id:144863 AE015925.1 Chlamydophila caviae GPIC prokMSA_id:231109 AB285329.1 Chlamydophila psittaci str. CPX0308 prokMSA_id:315134 EU871431.1 Site-directed allelic exchange Chlamydia introduced electroporation Chlamydophila psittaci 6BC region experimentally induced mutations recombinant vector pRAK426 prokMSA_id:535841 GQ398030.1 Chlamydophila sp. str. 08-1274_Flock22 prokMSA_id:560994 GQ398031.1 Chlamydophila sp. str. 08-1274_Flock23 prokMSA_id:577184 GQ398027.1 Chlamydophila sp. str. 08-1274_Flock13 prokMSA_id:586909 GQ398029.1 Chlamydophila sp. str. 08-1274_Flock21 prokMSA_id:592030 GQ398026.1 Chlamydophila sp. str. 08-1274_Flock3 2.16.1.2.2.3.2 s__Chlamydophila abortus 4 seqs 2.16.1.2.2.3.2.1248 OTU 4 seqs prokMSA_id:2946 Z49872.1 Chlamydophila abortus str. OEA prokMSA_id:3001 Z49871.1 Chlamydophila abortus str. EAE prokMSA_id:3021 AB001783.1 Chlamydophila abortus str. B577 ATCC VR-656 prokMSA_id:3022 U76710.2 Chlamydophila abortus str. EBA 2.16.1.2.2.3.3 s__Chlamydophila felis 5 seqs 2.16.1.2.2.3.3.1249 OTU 5 seqs prokMSA_id:2940 D85704.1 Chlamydophila felis str. Fe/C164 prokMSA_id:2944 AB001785.1 Chlamydophila felis str. Fe-145 prokMSA_id:20912 E17342.1 Chlamydia psittaci Fe/Pn-1 prokMSA_id:155301 NC_007899.1 Chlamydophila felis str. Fe/C-56 prokMSA_id:156161 AP006861.1 Chlamydophila felis str. Fe/C-56 2.16.1.2.2.3.4 s__Chlamydophila pecorum 7 seqs 2.16.1.2.2.3.4.1250 OTU 7 seqs prokMSA_id:3027 D88317.1 Chlamydophila pecorum str. E58 prokMSA_id:3028 U73782.1 Chlamydophila pecorum str. BE prokMSA_id:3029 U73785.1 Chlamydophila pecorum str. Bo/E8 prokMSA_id:3034 AB001774.1 Chlamydophila pecorum str. Bo-1485 prokMSA_id:3035 AB001775.1 Chlamydophila pecorum str. Bo-Maeda prokMSA_id:3036 AB001776.1 Chlamydophila pecorum str. Bo-Yokohama prokMSA_id:3037 AB001777.1 Chlamydophila pecorum str. SPV789 2.16.1.2.2.3.5 s__Chlamydophila pneumoniae 14 seqs 2.16.1.2.2.3.5.1251 OTU 14 seqs prokMSA_id:2948 L06108.1 Chlamydophila pneumoniae str. TW183 prokMSA_id:2949 U73783.1 Chlamydophila pneumoniae str. P1 (Parola) prokMSA_id:2951 AF139200.1 Chlamydophila cf. pneumoniae str. CPXT1 prokMSA_id:2952 U68426.2 Chlamydophila pneumoniae str. N16 prokMSA_id:3006 Z49873.1 Chlamydia pneumoniae prokMSA_id:3008 Z49874.1 Chlamydophila pneumoniae prokMSA_id:49993 NC_000922.1 Chlamydophila pneumoniae str. CWL029 prokMSA_id:90574 AE017160.1 Chlamydophila pneumoniae str. TW-183 prokMSA_id:99519 AY555075.1 Chlamydophila pneumoniae LKK-1 prokMSA_id:112346 NC_002179.2 Chlamydophila pneumoniae str. AR39 prokMSA_id:146453 AE001363.1 Chlamydophila pneumoniae str. CWL029 prokMSA_id:153364 DQ444323.1 Chlamydophila pneumoniae str. WBB prokMSA_id:309727 FJ236984.1 Chlamydophila pneumoniae str. LPCoLN prokMSA_id:521709 CP001713.1 Chlamydophila pneumoniae str. LPCoLN 2.16.1.2.2.3.6 s__Chlamydophila psittaci 32 seqs 2.16.1.2.2.3.6.1252 OTU 32 seqs prokMSA_id:2964 AB001778.1 Chlamydophila psittaci str. 6BC prokMSA_id:2966 AB001779.1 Chlamydophila psittaci str. Bud-1 prokMSA_id:2967 AB001780.1 Chlamydophila psittaci Bud-11F budgerigar prokMSA_id:2968 AB001781.1 Chlamydophila psittaci Bud-16F budgerigar prokMSA_id:2969 AB001782.1 Chlamydophila psittaci Bud-5695 budgerigar prokMSA_id:2970 AB001784.1 Chlamydophila psittaci str. Cal-10 prokMSA_id:2971 AB001786.1 Chlamydophila psittaci str. GCP-1 prokMSA_id:2972 AB001787.1 Chlamydophila psittaci str. Itoh prokMSA_id:2973 AB001788.1 Chlamydophila psittaci Izawa-1 budgerigar prokMSA_id:2974 AB001789.1 Chlamydophila psittaci str. Koala prokMSA_id:2975 AB001790.1 Chlamydophila psittaci Mizuno-1F budgerigar prokMSA_id:2976 AB001791.1 Chlamydophila psittaci str. Ohmiya prokMSA_id:2977 AB001792.1 Chlamydophila psittaci P1015 feral pigeon prokMSA_id:2978 AB001793.1 Chlamydophila psittaci P1041 feral pigeon prokMSA_id:2979 AB001794.1 Chlamydophila psittaci P1305 feral pigeon prokMSA_id:2980 AB001795.1 Chlamydophila psittaci P1307 feral pigeon prokMSA_id:2981 AB001796.1 Chlamydophila psittaci P1313 feral pigeon prokMSA_id:2982 AB001797.1 Chlamydophila psittaci P1315 feral pigeon prokMSA_id:2983 AB001798.1 Chlamydophila psittaci P1321 feral pigeon prokMSA_id:2984 AB001799.1 Chlamydophila psittaci P1605 feral pigeon prokMSA_id:2985 AB001800.1 Chlamydophila psittaci P1646 feral pigeon prokMSA_id:2986 AB001801.1 Chlamydophila psittaci P1888 feral pigeon prokMSA_id:2988 AB001803.1 Chlamydophila psittaci str. PCM131 prokMSA_id:2989 AB001804.1 Chlamydophila psittaci str. PCM27 prokMSA_id:2990 AB001805.1 Chlamydophila psittaci str. PCM30 prokMSA_id:2991 AB001806.1 Chlamydophila psittaci str. PCM44 prokMSA_id:2992 AB001807.1 Chlamydophila psittaci str. PCM55 prokMSA_id:2993 AB001808.1 Chlamydophila psittaci str. PCM9 prokMSA_id:2994 AB001812.1 Chlamydophila psittaci Sugimoto-F cockatiel prokMSA_id:2995 AB001813.1 Chlamydophila psittaci Sugawara budgerigar prokMSA_id:2997 AB001815.1 Chlamydophila psittaci str. T4 prokMSA_id:2998 AB001816.1 Chlamydophila abortus str. Tk-Cal 2.16.1.2.3 f__Parachlamydiaceae 38 seqs 2.16.1.2.3.1 Unclassified 5 seqs 2.16.1.2.3.1.1253 OTU 5 seqs prokMSA_id:2930 AF098330.1 endosymbiont of Acanthamoeba sp. TUME1 prokMSA_id:2933 AF083616.1 endosymbiont of Acanthamoeba sp. UWC22 prokMSA_id:24341 AF177275.1 Neochlamydia hartmannellae str. A1Hsp prokMSA_id:542137 AB506677.1 symbiont prokMSA_id:579085 EU683885.1 Neochlamydia sp. str. CRIB37 2.16.1.2.3.2 g__Candidatus Protochlamydia 19 seqs 2.16.1.2.3.2.1 Unclassified 3 seqs 2.16.1.2.3.2.1.1254 OTU 3 seqs prokMSA_id:547579 FJ976093.1 Detection Chlamydiae amoeba and mixed co freshwater isolate cvE14Candidatus Protochlamydia sp. str. cvE14 prokMSA_id:562333 FJ532293.1 Biodiversity amoebae and amoeba- water treatment plants biofilm clarifier isolate CRIB40Candidatus Protochlamydia sp. str. CRIB40 S159 prokMSA_id:591794 FJ532290.1 symbiont 2.16.1.2.3.2.2 s__Candidatus Protochlamydia amoebophila 8 seqs 2.16.1.2.3.2.2.1255 OTU 8 seqs prokMSA_id:2932 AF083615.1 endosymbiont of Acanthamoeba sp. UWE25 prokMSA_id:136933 BX908798.1 Parachlamydia sp. str. UWE25 prokMSA_id:136934 BX908798.1 Parachlamydia sp. str. UWE25 prokMSA_id:239897 AM408789.1 symbiont prokMSA_id:248292 EU090706.1 Chlamydia-Like Respiratory Pneumonia Patients clinical respiratory s German patients suffering pneumonia clone CN823 prokMSA_id:471187 NC_005861.1 Candidatus Protochlamydia amoebophila str. UWE25 prokMSA_id:471188 NC_005861.1 Candidatus Protochlamydia amoebophila str. UWE25 prokMSA_id:574577 AB506679.1 symbiont 2.16.1.2.3.2.3 s__Protochlamydia naegleriophila 8 seqs 2.16.1.2.3.2.3.1256 OTU 8 seqs prokMSA_id:229341 DQ632609.1 Protochlamydia neagleriophila str. KNic prokMSA_id:550487 FJ976102.1 Protochlamydia naegleriophila str. cvE26 prokMSA_id:552818 FJ976103.1 Protochlamydia naegleriophila str. cvE25 prokMSA_id:557196 EU384664.1 Protochlamydia naegleriophila str. CRIB 36 prokMSA_id:566095 FJ532295.1 Protochlamydia naegleriophila str. CRIB42 S197 prokMSA_id:579758 FJ532294.1 Protochlamydia naegleriophila str. CRIB41 S156 prokMSA_id:588103 FJ976101.1 Protochlamydia naegleriophila str. cvE27 prokMSA_id:592974 EU707854.1 Protochlamydia naegleriophila str. CRIB35 2.16.1.2.3.3 g__Parachlamydia 14 seqs 2.16.1.2.3.3.1 s__Parachlamydia acanthamoebae 14 seqs 2.16.1.2.3.3.1.1257 OTU 14 seqs prokMSA_id:2920 Y07556.1 Parachlamydia acanthamoebae str. Bn9 prokMSA_id:49792 AF366365.1 Parachlamydia sp. Hall's coccus prokMSA_id:108749 AJ715410.1 Parachlamydia sp. UV-7 prokMSA_id:153281 DQ309029.1 Parachlamydia acanthamoebae str. Seine prokMSA_id:229253 AM412760.1 Parachlamydia sp. str. OEW1 prokMSA_id:245382 AM408793.1 symbiont prokMSA_id:250543 AM408788.1 symbiont prokMSA_id:263114 AM941720.1 Parachlamydia acanthamoebae str. Berg17 prokMSA_id:544430 AF478473.2 New parachlamydial phylotypes detected s human clinical sputum clone cvC15 prokMSA_id:561599 FJ976105.1 Parachlamydia acanthamoebae str. cvE20 prokMSA_id:565839 FJ976104.1 Detection Chlamydiae freshwater amoeba and mixed co garden pot clone prokMSA_id:575859 FJ976106.1 Parachlamydia acanthamoebae str. cvE19 prokMSA_id:580742 AF478463.2 New parachlamydial phylotypes detected s human clinical nasal washing clone cvC7 prokMSA_id:583419 FJ532291.1 Parachlamydia acanthamoebae str. CRIB43 2.16.1.2.4 f__Rhabdochlamydiaceae 22 seqs 2.16.1.2.4.1 g__Candidatus Rhabdochlamydia 22 seqs 2.16.1.2.4.1.1258 OTU 22 seqs prokMSA_id:22160 AF364577.1 Chlamydiales clone P-11 prokMSA_id:24629 AF364562.1 Chlamydiales clone P-13 prokMSA_id:25769 AF364571.1 Chlamydiales clone P-17 prokMSA_id:26915 AF364573.1 Chlamydiales clone P-19 prokMSA_id:30860 AF364567.1 Chlamydiales clone P-15 prokMSA_id:31998 AF364574.1 Chlamydiales clone P-8 prokMSA_id:33726 AF364566.1 Chlamydiales clone P-14 prokMSA_id:34118 AF364576.1 Chlamydiales clone P-10 prokMSA_id:39277 AF364561.1 Chlamydiales clone P-2 prokMSA_id:40042 AF364570.1 Chlamydiales clone P-16 prokMSA_id:43225 AF364560.1 Chlamydiales clone P-1 prokMSA_id:43574 AF364572.1 Chlamydiales clone P-18 prokMSA_id:50356 AF364578.1 Chlamydiales clone P-12 prokMSA_id:83246 AY223862.1 Candidatus Rhabdochlamydia porcellionis clone RKPsHep porcellionis prokMSA_id:152689 AY928092.1 Rhabdochlamydia crassificans str. CRIB01 prokMSA_id:239522 DQ903988.1 Microbes Hawaiian Marine Sponge Suberites zeteki USA: Oahu Hawaii clone PRPR10 prokMSA_id:249365 EU090707.1 Chlamydia-Like Respiratory Pneumonia Patients clinical respiratory s German patients suffering pneumonia clone CN554 prokMSA_id:253897 EU133918.1 tallgrass prarie soil clone FFCH17845 prokMSA_id:543064 EU363465.1 Biodiversity amoebae-resisting water-treatment plant river water isolate 34Chlamydiales str. CRIB 34 prokMSA_id:583949 EU683887.1 Biodiversity amoebae-resisting treatment plant raw surface water Acanthamoeba co isolate CRIB33Chlamydiales str. CRIB33 prokMSA_id:588439 FJ976100.1 Detection Chlamydiae amoeba and mixed co freshwater isolate cvE55Rhabdochlamydiaceae str. cvE55 prokMSA_id:592413 FJ976099.1 Detection Chlamydiae freshwater amoeba and mixed co fountain isolate cvE58Rhabdochlamydiaceae str. cvE58 2.16.1.2.5 f__Simkaniaceae 6 seqs 2.16.1.2.5.1259 OTU 6 seqs prokMSA_id:2935 U68460.2 Simkania negevensis str. Z prokMSA_id:17182 AF400484.1 Bemisia tabaci biotype Jatropha symbiont prokMSA_id:89521 AY140910.1 Fritschea bemisiae prokMSA_id:89923 AY140911.1 Fritschea eriococci prokMSA_id:217851 EF177461.1 Xenoturbella westbladi UUZM 57848 symbiont prokMSA_id:593461 NR_029194.1 Simkania negevensis str. Z; ATCC VR 1471 2.16.1.2.6 f__Waddliaceae 5 seqs 2.16.1.2.6.1 g__Waddlia 5 seqs 2.16.1.2.6.1.1 Unclassified 1 seq 2.16.1.2.6.1.1.1260 OTU 1 seq prokMSA_id:100535 AY184804.1 Waddlia sp. str. G817 2.16.1.2.6.1.2 s__Waddlia chondrophila 4 seqs 2.16.1.2.6.1.2.1261 OTU 4 seqs prokMSA_id:2936 AF042496.1 Waddlia chondrophila str. WSU 86/1044 prokMSA_id:54620 AF346001.1 Waddlia chondrophila str. 2032/99 prokMSA_id:236681 EU090708.1 Chlamydia-Like Respiratory Pneumonia Patients clinical respiratory s German patients suffering pneumonia clone CN761 prokMSA_id:542808 NR_028697.1 Waddlia chondrophila str. WSU 86/1044; ATCC VR-1470 2.17 p__Chlorobi 408 seqs 2.17.1 Unclassified 25 seqs 2.17.1.1262 OTU 25 seqs prokMSA_id:2640 AF027006.1 hot spring clone OPB88 prokMSA_id:2647 AF018187.1 temperature clone env.OPS 2 prokMSA_id:2651 AF027009.1 hot spring clone OPB56 prokMSA_id:30516 AF445657.1 travertine hot spring clone SM1B09 prokMSA_id:41844 AF234130.1 arid soil clone #0319-6E22 prokMSA_id:49950 AF402977.1 hot spring clone bacteriap24 prokMSA_id:72373 AJ295649.1 uranium mining waste pile clone KF-JG30-B11 prokMSA_id:112647 AY861796.1 Obsidian Pool prime community clone OPPB063 prokMSA_id:114305 AY921840.1 farm soil clone AKYH1119 prokMSA_id:146912 DQ324904.1 Geochemical and bioenergetic variability across systems Yellowstone National Park geothermal system clone GAL54 prokMSA_id:148867 DQ324902.1 Geochemical and bioenergetic variability across systems Yellowstone National Park geothermal system clone GAL52 prokMSA_id:149259 DQ324892.1 Geochemical and bioenergetic variability across systems Yellowstone National Park geothermal system clone GAL42 prokMSA_id:149872 DQ324891.1 Geochemical and bioenergetic variability across systems Yellowstone National Park geothermal system clone GAL41 prokMSA_id:157685 DQ490014.1 Microbial Great Boiling Spring sediment hot spring; temperature 80 C clone GBS_L4_E12 prokMSA_id:158864 DQ490013.1 Microbial Great Boiling Spring sediment hot spring; temperature 80 C clone GBS_L4_E11 prokMSA_id:164804 DQ645243.1 Microbial and oxidation activity biofilms within Alvord Desert Basin Southeastern Oregon USA arsenic circumneutral hot springs clone A3DB-A9 prokMSA_id:167253 DQ645241.1 Microbial and oxidation activity biofilms within Alvord Desert Basin Southeastern Oregon USA arsenic circumneutral hot springs clone A3DB-A3 prokMSA_id:203705 EF018268.1 aspen rhizosphere clone Amb_16S_627 prokMSA_id:239595 EU133919.1 tallgrass prarie soil clone FFCH12071 prokMSA_id:253338 EU133924.1 tallgrass prarie soil clone FFCH3953 prokMSA_id:258229 EF126252.1 Phototrophic microbial build laminated Fe-formations on Sulawesi Indonesia mesophilic terrestrial mat clone MMA18 prokMSA_id:263133 EF126257.1 Phototrophic microbial build laminated Fe-formations on Sulawesi Indonesia mesophilic terrestrial mat clone MMA28 prokMSA_id:273696 EF126256.1 Phototrophic microbial build laminated Fe-formations on Sulawesi Indonesia mesophilic terrestrial mat clone MMA26 prokMSA_id:277457 EF126253.1 Phototrophic microbial build laminated Fe-formations on Sulawesi Indonesia mesophilic terrestrial mat clone MMA20 prokMSA_id:566742 FN545865.1 un 2 Rupi basin Bulgaria hot spring clone S2R-49 2.17.2 c__BSV19 25 seqs 2.17.2.1263 OTU 25 seqs prokMSA_id:36507 AJ296575.1 uranium mining mill tailing clone GR-296.II.11 GR-296.II.11 prokMSA_id:83562 AY221073.1 Mammoth cave clone CCM9b prokMSA_id:145701 AM086158.1 Abundance and archaea mesotrophic Lake Kinneret lake profundal sediment clone c5LKS98 prokMSA_id:147632 AM086119.1 Abundance and archaea mesotrophic Lake Kinneret lake profundal sediment clone c5LKS28 prokMSA_id:149135 AM086144.1 Abundance and archaea mesotrophic Lake Kinneret lake profundal sediment clone c5LKS75 prokMSA_id:152302 AM162482.1 and situ identification acidic sphagnum peat bog clone B44 prokMSA_id:170662 AB252951.1 Identification Shibayama lagoon Ishikawa Japan iron-oxidation biofilm clone 397 prokMSA_id:172221 AB252950.1 Identification Shibayama lagoon Ishikawa Japan iron-oxidation biofilm clone 392 prokMSA_id:196940 DQ501337.1 Seasonal dynamics free-living and particle- four lakes northeastern Germany freshwater clone ST11-35 prokMSA_id:230544 DQ640726.1 full-scale EBPR sludge clone Skagen107 prokMSA_id:310286 FM207902.1 Anaerobic p-xylene mineralization activated sludge and fresh water sediment denitrifying enrichment pXyN1 clone 402 prokMSA_id:373685 FJ810563.1 Subsurface ecosystem resilience: Long-term attenuation subsurface contaminants supports elaborate eukaryotic food chain and dynamic microbial coal tar waste-contaminated groundwater clone JMYB36-65 prokMSA_id:408758 FJ810559.1 Subsurface ecosystem resilience: Long-term attenuation subsurface contaminants supports elaborate eukaryotic food chain and dynamic microbial coal tar waste-contaminated groundwater clone JMYB36-29 prokMSA_id:467449 FJ810562.1 Subsurface ecosystem resilience: Long-term attenuation subsurface contaminants supports elaborate eukaryotic food chain and dynamic microbial coal tar waste-contaminated groundwater clone JMYB36-53 prokMSA_id:509237 FJ485389.1 microbial autonomous rover world's deepest phreatic sinkhole wall biomat El Zacaton 273m depth clone Z273MBM65 prokMSA_id:554198 GU208228.1 Study on Sediment Dongping Lake sediment clone 3C4-18 prokMSA_id:560369 GU208405.1 Study on Sediment Dongping Lake sediment clone Fh2-11 prokMSA_id:561793 GU208359.1 Study on Sediment Dongping Lake sediment clone Td4-4 prokMSA_id:565419 AM490708.1 Linking and functional nutrient spiraling mats (USA) microbial mat sulfidic cave spring Lower Kane Cave Big Horn LKC22 clone SS_LKC22_UB231 prokMSA_id:565618 AM490699.1 Linking and functional nutrient spiraling mats (USA) microbial mat sulfidic cave spring Lower Kane Cave Big Horn LKC22 clone SS_LKC22_UB12 prokMSA_id:565948 GQ472351.1 Microbial Dongping Lake lake sediment clone 3C4-18 prokMSA_id:569201 GQ472436.1 Microbial Dongping Lake lake sediment clone 5W2-3 prokMSA_id:571383 GQ472339.1 Microbial Dongping Lake lake sediment clone 3C3-5 prokMSA_id:578382 AB486984.1 Microbial populations responsive denitrification-inducing conditions rice paddy soil clone TSCOR003_P22 prokMSA_id:581318 GU208220.1 Study on Sediment Dongping Lake sediment clone 3C3-5 2.17.3 c__Chlorobia 211 seqs 2.17.3.1 o__Chlorobiales 211 seqs 2.17.3.1.1 f__Chlorobiaceae 211 seqs 2.17.3.1.1.1 Unclassified 40 seqs 2.17.3.1.1.1.1264 OTU 40 seqs prokMSA_id:2671 Y08104.1 Chlorobium phaeobacteroides str. 2430 prokMSA_id:102016 AJ831746.1 chemocline clone 366 prokMSA_id:130684 NZ_AAHJ01000048.1 Chlorobium limicola str. DSM 245 prokMSA_id:133608 AAIB01000050.1 Chlorobium phaeobacteroides str. DSM 266 prokMSA_id:133739 NZ_AAIB01000050.1 Chlorobium phaeobacteroides str. DSM 266 prokMSA_id:134557 AAHJ01000048.1 Chlorobium limicola str. DSM 245 prokMSA_id:135829 Y10113.1 Chlorobium limicola DSM 245 str. 6330 prokMSA_id:139523 AM086647.1 Chlorobium phaeobacteroides str. 1VIID7 prokMSA_id:149292 AM086114.1 Abundance and archaea mesotrophic Lake Kinneret lake profundal sediment clone c5LKS19 prokMSA_id:179705 AM050128.1 Chlorobium phaeobacteroides str. Glu prokMSA_id:183076 AM050127.1 Chlorobium phaeobacteroides str. Cl1401 prokMSA_id:187900 NC_008639.1 Chlorobium phaeobacteroides str. DSM 266 prokMSA_id:187901 NC_008639.1 Chlorobium phaeobacteroides str. DSM 266 prokMSA_id:189071 EF153291.1 Chlorobium sp. str. ShCl03 prokMSA_id:191370 CP000492.1 Chlorobium phaeobacteroides str. DSM 266 prokMSA_id:191371 CP000492.1 Chlorobium phaeobacteroides str. DSM 266 prokMSA_id:198473 AM050129.1 Chlorobium phaeobacteroides str. DagowIII prokMSA_id:199386 AM050126.1 Chlorobium limicola str. E2P2 prokMSA_id:233079 AM690780.1 Chlorobium limicola Vz prokMSA_id:233350 AM690805.1 Chlorobium limicola CNg prokMSA_id:256699 EF654662.1 Chlorobium phaeobacteroides str. G-gCphb03 prokMSA_id:292136 NC_010803.1 Chlorobium limicola str. DSM 245 prokMSA_id:292137 NC_010803.1 Chlorobium limicola str. DSM 245 prokMSA_id:300256 CP001097.1 Chlorobium limicola str. DSM 245 prokMSA_id:300257 CP001097.1 Chlorobium limicola str. DSM 245 prokMSA_id:510734 FJ716327.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B80 prokMSA_id:541143 FJ437827.1 Benthic okenone production Fayetteville New York Green Lake chemocline 20.5 m water depth clone FGL3_B99 prokMSA_id:542509 FJ437858.1 Benthic okenone production Fayetteville New York Green Lake 25 m water depth clone FGL12_B84 prokMSA_id:546180 FJ716336.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B70 prokMSA_id:556538 EU662401.1 Productivity- Chemolithoautotrophically Based Sulfidic Karst Systems microbial mat clone CC1_16S_7 prokMSA_id:559218 FJ437784.1 Benthic okenone production Fayetteville New York Green Lake chemocline 20.5 m water depth clone FGL3_B26 prokMSA_id:566418 FJ437799.1 Benthic okenone production Fayetteville New York Green Lake chemocline 20.5 m water depth clone FGL3_B37 prokMSA_id:566782 EU662315.1 Productivity- Chemolithoautotrophically Based Sulfidic Karst Systems microbial mat clone CC1B_16S_41 prokMSA_id:568947 FJ437817.1 Benthic okenone production Fayetteville New York Green Lake chemocline 20.5 m water depth clone FGL3_B46 prokMSA_id:569070 FJ437781.1 Benthic okenone production Fayetteville New York Green Lake chemocline 20.5 m water depth clone FGL3_B117 prokMSA_id:569179 EU662292.1 Productivity- Chemolithoautotrophically Based Sulfidic Karst Systems microbial mat clone CC1B_16S_10 prokMSA_id:569763 EU662387.1 Productivity- Chemolithoautotrophically Based Sulfidic Karst Systems microbial mat clone CC1_16S_36 prokMSA_id:573357 FJ716288.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B34 prokMSA_id:573472 FJ716319.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B91 prokMSA_id:584465 EU662359.1 Productivity- Chemolithoautotrophically Based Sulfidic Karst Systems microbial mat clone CC1B_16S_90 2.17.3.1.1.2 g__Chlorobaculum 52 seqs 2.17.3.1.1.2.1 Unclassified 36 seqs 2.17.3.1.1.2.1.1265 OTU 36 seqs prokMSA_id:2687 Y10642.2 Chlorobium limicola str. UdG 6040 prokMSA_id:2690 Y10646.2 Chlorobium limicola str. UdG 6045 prokMSA_id:2692 Y08102.1 Chlorobaculum thiosulfatiphilum str. 6230 prokMSA_id:103776 AY693833.1 anaerobic sludge clone EUB42 prokMSA_id:111790 AJ299413.1 Chlorobium phaeobacteroides str. 1549 prokMSA_id:114464 AY394784.1 Chlorobaculum sp. BS3.2m-44-8full prokMSA_id:114664 AY394785.1 Chlorobaculum sp. BS3.2m-44-5full prokMSA_id:114818 AY394783.1 Chlorobaculum sp. BS3.2m-44-4full prokMSA_id:188667 AM050125.1 Chlorobium limicola str. C1 prokMSA_id:192472 AM050131.1 Pelodictyon luteolum str. E1P1 prokMSA_id:200162 DQ383318.1 biofilm phototrophic biological sulfide-removal reactor photobioreactor clone i9-111 prokMSA_id:200258 DQ383302.1 biofilm phototrophic biological sulfide-removal reactor photobioreactor clone 16/3-119 prokMSA_id:200332 DQ383314.1 biofilm phototrophic biological sulfide-removal reactor photobioreactor clone i9-114 prokMSA_id:201153 DQ383299.1 biofilm phototrophic biological sulfide-removal reactor photobioreactor clone 16/3-108 prokMSA_id:201311 DQ383297.1 biofilm phototrophic biological sulfide-removal reactor photobioreactor clone 16/3-102 prokMSA_id:201398 DQ383300.1 biofilm phototrophic biological sulfide-removal reactor photobioreactor clone 16/3-110 prokMSA_id:201766 DQ383307.1 biofilm phototrophic biological sulfide-removal reactor photobioreactor clone 16/3-165 prokMSA_id:202658 DQ383311.1 biofilm phototrophic biological sulfide-removal reactor photobioreactor clone i9-9 prokMSA_id:203107 DQ383308.1 biofilm phototrophic biological sulfide-removal reactor photobioreactor clone 16/3-167 prokMSA_id:218799 EF560701.1 Chlorobaculum parvum str. C prokMSA_id:220806 AM690351.1 Chlorobaculum tepidum prokMSA_id:222254 EF560700.1 Chlorobaculum parvum str. X prokMSA_id:226020 EF560696.1 Chlorobaculum macestae str. M prokMSA_id:268102 EU275406.1 Deep-Water Photoferrotrophs Thrive Archaean Ocean Analog deep water chemocline tropical freshwater lake clone MTW2 prokMSA_id:509148 FJ485139.1 microbial autonomous rover world's deepest phreatic sinkhole water column El Zacaton 22m depth clone Zac7167 prokMSA_id:509566 FJ716297.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B24 prokMSA_id:513827 FJ716277.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B46 prokMSA_id:513942 FJ716280.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B43 prokMSA_id:538426 FJ485128.1 microbial autonomous rover world's deepest phreatic sinkhole water column El Zacaton 22m depth clone Zac7156 prokMSA_id:540816 NR_029321.1 Chlorobaculum thiosulfatiphilum str. 6230; DSM 249 prokMSA_id:544138 FJ716298.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B23 prokMSA_id:546031 FJ485117.1 microbial autonomous rover world's deepest phreatic sinkhole water column El Zacaton 22m depth clone Zac7146 prokMSA_id:554120 FJ716348.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B109 prokMSA_id:560988 FJ485586.1 microbial autonomous rover world's deepest phreatic sinkhole wall biomat El Zacaton 27m depth clone Z27M52B prokMSA_id:568982 FJ902355.1 phreatic limestone sinkholes northeastern Mexico green biomat 8m deep cenote Caracol clone CAR8MG39 prokMSA_id:585706 FJ902350.1 phreatic limestone sinkholes northeastern Mexico green biomat 8m deep cenote Caracol clone CAR8MG33 2.17.3.1.1.2.2 s__Chlorobaculum parvum 12 seqs 2.17.3.1.1.2.2.1266 OTU 12 seqs prokMSA_id:69274 AB054671.1 Chlorobium limicola str. M1 prokMSA_id:106180 AJ428430.1 saltmarsh clone K-701 prokMSA_id:113350 AJ888466.1 Chlorobium sp. str. 8GSB prokMSA_id:113733 AJ888465.1 Chlorobium sp. str. 6GSB prokMSA_id:113964 AJ888464.1 Chlorobium gokarna str. 4GSB prokMSA_id:199225 EF064316.1 Chlorobaculum parvum str. UdG6501Lms prokMSA_id:225651 EF560699.1 Chlorobaculum parvum str. L prokMSA_id:233912 AM690802.1 Chlorobaculum parvum 5Sg prokMSA_id:344812 NC_011027.1 Chlorobaculum parvum str. NCIB 8327 prokMSA_id:344813 NC_011027.1 Chlorobaculum parvum str. NCIB 8327 prokMSA_id:345872 CP001099.1 Chlorobaculum parvum str. NCIB 8327 prokMSA_id:345873 CP001099.1 Chlorobaculum parvum str. NCIB 8327 2.17.3.1.1.2.3 s__Chlorobaculum tepidum 4 seqs 2.17.3.1.1.2.3.1267 OTU 4 seqs prokMSA_id:137177 AE006470.1 Chlorobium tepidum str. TLS prokMSA_id:137178 AE006470.1 Chlorobium tepidum str. TLS prokMSA_id:143083 NC_002932.3 Chlorobium tepidum str. TLS prokMSA_id:143100 NC_002932.3 Chlorobium tepidum str. TLS 2.17.3.1.1.3 g__Chlorobium 19 seqs 2.17.3.1.1.3.1 s__Chlorobium chlorochromatii 3 seqs 2.17.3.1.1.3.1.1268 OTU 3 seqs prokMSA_id:105193 AJ578461.1 Chlorochromatium aggregatum prokMSA_id:141021 NC_007514.1 Chlorobium chlorochromatii str. CaD3 prokMSA_id:144442 CP000108.1 Chlorobium chlorochromatii str. CaD3 2.17.3.1.1.3.2 s__Chlorobium ferrooxidans 3 seqs 2.17.3.1.1.3.2.1269 OTU 3 seqs prokMSA_id:18641 Y18253.1 Chlorobium ferrooxidans DSM 13031 str. KofoX prokMSA_id:171289 NZ_AASE01000013.1 Chlorobium ferrooxidans str. DSM 13031 prokMSA_id:173203 AASE01000013.1 Chlorobium ferrooxidans str. DSM 13031 2.17.3.1.1.3.3 s__Chlorobium phaeovibrioides 13 seqs 2.17.3.1.1.3.3.1270 OTU 13 seqs prokMSA_id:2673 Y08105.1 Chlorobium phaeovibrioides str. 2631 prokMSA_id:2700 Y10654.1 Chlorobium phaeovibrioides str. DSM 269 prokMSA_id:131048 NZ_AAJD01000008.1 Prosthecochloris vibrioformis str. DSM 265 prokMSA_id:132861 AAJD01000008.1 Prosthecochloris vibrioformis str. DSM 265 prokMSA_id:193893 EF149015.1 Chlorobium sp. str. Mog4 prokMSA_id:221643 CP000607.1 Prosthecochloris vibrioformis DSM 265 prokMSA_id:226847 NC_009337.1 Prosthecochloris vibrioformis DSM 265 prokMSA_id:330917 EU770420.1 Chlorobium sp. str. sy9 prokMSA_id:553081 EU570867.1 transition and zone within near-shore anoxic basin: Nitinat Lake depth 22 m clone Nit5A0622_139 prokMSA_id:554669 EU570902.1 transition and zone within near-shore anoxic basin: Nitinat Lake depth 13 m clone Nit5Au0613_180 prokMSA_id:572531 NR_029322.1 Chlorobium phaeovibrioides str. 2631; DSM 269 prokMSA_id:575547 FJ628256.1 transition and zone within near-shore basin: brackish water anoxic fjord Nitinat Lake depth 22 clone Nit5A0622_501 prokMSA_id:591732 EU570866.1 transition and zone within near-shore anoxic basin: Nitinat Lake depth 22 m clone Nit5A0622_138 2.17.3.1.1.4 g__Chloroherpeton 3 seqs 2.17.3.1.1.4.1 s__Chloroherpeton thalassium 3 seqs 2.17.3.1.1.4.1.1271 OTU 3 seqs prokMSA_id:202092 AF170103.1 Chloroherpeton thalassium prokMSA_id:326028 CP001100.1 Chloroherpeton thalassium str. ATCC 35110 prokMSA_id:347501 NC_011026.1 Chloroherpeton thalassium str. ATCC 35110 2.17.3.1.1.5 g__Pelodictyon 20 seqs 2.17.3.1.1.5.1 s__Pelodictyon luteolum 6 seqs 2.17.3.1.1.5.1.1272 OTU 6 seqs prokMSA_id:2694 Y08103.1 Prosthecochloris vibrioformis str. 6132 prokMSA_id:2695 Y08107.1 Pelodictyon luteolum DSM 273 str. 2530 prokMSA_id:143109 CP000096.1 Pelodictyon luteolum str. DSM 273 prokMSA_id:143111 CP000096.1 Pelodictyon luteolum str. DSM 273 prokMSA_id:143787 NC_007512.1 Pelodictyon luteolum str. DSM 273 prokMSA_id:143806 NC_007512.1 Pelodictyon luteolum str. DSM 273 2.17.3.1.1.5.2 s__Pelodictyon phaeoclathratiforme 14 seqs 2.17.3.1.1.5.2.1273 OTU 14 seqs prokMSA_id:2670 Y08108.1 Pelodictyon phaeoclathratiforme str. BU-1 prokMSA_id:101351 AJ831742.1 chemocline clone 849 prokMSA_id:101859 AJ831745.1 chemocline clone 827 prokMSA_id:106233 AJ831751.1 chemocline clone 810 prokMSA_id:132219 NZ_AAIK01000026.1 Pelodictyon phaeoclathratiforme str. BU-1 prokMSA_id:134114 AAIK01000026.1 Pelodictyon phaeoclathratiforme str. BU-1 prokMSA_id:139925 AM086645.1 Pelodictyon clathratiforme str. 4DE prokMSA_id:330431 CP001110.1 Pelodictyon phaeoclathratiforme str. BU-1 prokMSA_id:330432 CP001110.1 Pelodictyon phaeoclathratiforme str. BU-1 prokMSA_id:330433 CP001110.1 Pelodictyon phaeoclathratiforme str. BU-1 prokMSA_id:356465 NC_011060.1 Pelodictyon phaeoclathratiforme str. BU-1 prokMSA_id:356466 NC_011060.1 Pelodictyon phaeoclathratiforme str. BU-1 prokMSA_id:356467 NC_011060.1 Pelodictyon phaeoclathratiforme str. BU-1 prokMSA_id:582290 FJ502275.1 Co-occurrence denitrification and nitrogen fixation meromictic lake (Switzerland) Lake Cadagno chemocline; 12.5m clone HH286 2.17.3.1.1.6 g__Prosthecochloris 77 seqs 2.17.3.1.1.6.1 Unclassified 50 seqs 2.17.3.1.1.6.1.1274 OTU 50 seqs prokMSA_id:39385 AJ291826.1 Prosthecochloris aestuarii str. CHP 3401 prokMSA_id:60379 AF513460.1 Chlorobiaceae isolate str. LA53 prokMSA_id:106671 AJ428433.1 Salt lake mud clone K-902 prokMSA_id:106822 AJ428434.1 Salt lake mud clone K-974 prokMSA_id:112750 AJ888467.1 Prosthecochloris sp. str. Vk prokMSA_id:113834 AJ888468.1 Prosthecochloris sp. str. 4Vi prokMSA_id:134536 NZ_AAIC01000044.1 Chlorobium phaeobacteroides str. BS1 prokMSA_id:134559 AAIC01000044.1 Chlorobium phaeobacteroides str. BS1 prokMSA_id:189290 AM050132.1 Prosthecochloris aestuarii str. CE2401 prokMSA_id:190755 EF064309.1 Prosthecochloris aestuarii str. UdG7004Chp prokMSA_id:222703 AB301726.1 Prosthecochloris sp. str. 5H2 prokMSA_id:227624 AM690783.1 Prosthecochloris indica 6Pg prokMSA_id:229234 AM690806.1 Prosthecochloris aestuarii B7 prokMSA_id:229465 AM690791.1 Prosthecochloris vibrioformis 3M prokMSA_id:229783 AM690781.1 Prosthecochloris indica 4Kg prokMSA_id:230285 AM690803.1 Prosthecochloris vibrioformis Vfg prokMSA_id:230807 AM690785.1 Prosthecochloris indica J20 prokMSA_id:231741 AM690800.1 Prosthecochloris aestuarii G48 prokMSA_id:232371 AM690782.1 Prosthecochloris vibrioformis G7g prokMSA_id:232431 AM690797.1 Prosthecochloris aestuarii P1 prokMSA_id:234038 AM690795.1 Prosthecochloris vibrioformis SQ6GGSB prokMSA_id:234356 AM690798.1 Prosthecochloris vibrioformis P3g prokMSA_id:235213 AM690799.1 Prosthecochloris aestuarii G25 prokMSA_id:310818 CP001101.1 Chlorobium phaeobacteroides str. BS1 prokMSA_id:310819 CP001101.1 Chlorobium phaeobacteroides str. BS1 prokMSA_id:343157 NC_010831.1 Chlorobium phaeobacteroides str. BS1 prokMSA_id:343158 NC_010831.1 Chlorobium phaeobacteroides str. BS1 prokMSA_id:511877 FJ716269.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B55 prokMSA_id:511962 EU265983.1 transition and zone within near-shore anoxic basin: Nitinat Lake depth 26 m clone Nit2A0626_57 prokMSA_id:511970 FJ716330.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B76 prokMSA_id:513209 FJ716270.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B54 prokMSA_id:513937 FJ716301.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B20 prokMSA_id:514036 FJ716333.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B73 prokMSA_id:537143 FJ716341.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B64 prokMSA_id:537837 FJ716311.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B99 prokMSA_id:539148 FJ716335.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B71 prokMSA_id:544355 FJ716339.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B66 prokMSA_id:545587 FJ716281.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B41 prokMSA_id:545654 FJ716268.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B56 prokMSA_id:550019 FJ716292.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B3 prokMSA_id:551453 FJ716329.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B78 prokMSA_id:554072 FJ716278.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B45 prokMSA_id:559859 FJ716351.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B106 prokMSA_id:561856 FJ716323.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B86 prokMSA_id:566365 EU266006.1 transition and zone within near-shore anoxic basin: Nitinat Lake depth 26 m clone Nit2A0626_81 prokMSA_id:566451 FJ716283.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B4 prokMSA_id:568732 FJ716271.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B53 prokMSA_id:570403 FJ716344.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B61 prokMSA_id:570653 EU266013.1 transition and zone within near-shore anoxic basin: Nitinat Lake depth 26 m clone Nit2A0626_88 prokMSA_id:575287 FJ716306.1 Chlorobi dominate shal chemocline Bahamas Sawmill Sink column 10.3 m water depth clone SAW1_B15 2.17.3.1.1.6.2 s__Prosthecochloris aestuarii 11 seqs 2.17.3.1.1.6.2.1275 OTU 11 seqs prokMSA_id:2675 Y07837.1 Prosthecochloris aestuarii DSM 271 str. SK 413 prokMSA_id:102580 AJ428429.1 beach mud clone K-500 prokMSA_id:106349 AJ428431.1 saltmarsh clone K-706 prokMSA_id:106512 AJ428432.1 saltmarsh clone K-721 prokMSA_id:130703 NZ_AAIJ01000002.1 Prosthecochloris aestuarii str. DSM 271 prokMSA_id:133741 AAIJ01000002.1 Prosthecochloris aestuarii str. DSM 271 prokMSA_id:227604 AM690793.1 Prosthecochloris aestuarii FTGSB prokMSA_id:231812 AM690792.1 Prosthecochloris aestuarii GG prokMSA_id:319080 EU770421.1 Prosthecochloris aestuarii str. sy10 prokMSA_id:344953 CP001108.1 Prosthecochloris aestuarii str. DSM 271 prokMSA_id:347487 NC_011059.1 Prosthecochloris aestuarii str. DSM 271 2.17.3.1.1.6.3 s__Prosthecochloris vibrioformis 16 seqs 2.17.3.1.1.6.3.1276 OTU 16 seqs prokMSA_id:2674 M62791.1 Prosthecochloris vibrioformis prokMSA_id:19433 AJ291827.1 Prosthecochloris vibrioformis str. CHP 3402 prokMSA_id:40271 AJ291828.1 Pelodictyon phaeum str. CIB 2401 prokMSA_id:91506 AY344404.1 Lake Kauhako 4 m clone K2-4-2 prokMSA_id:181701 EF064313.1 Prosthecochloris sp. str. UdG7009Lms prokMSA_id:182918 AM050130.1 Prosthecochloris vibrioformis str. EP2403 prokMSA_id:183020 EF064312.1 Prosthecochloris vibrioformis str. UdG7006Lms prokMSA_id:185526 EF064311.1 Prosthecochloris vibrioformis str. UdG7007Lpa prokMSA_id:191335 EF149016.1 Prosthecochloris sp. str. ShNPel02 prokMSA_id:194711 EF064315.1 Prosthecochloris sp. str. UdG7008Cib prokMSA_id:195057 EF064314.1 Prosthecochloris vibrioformis str. UdG7010Lms prokMSA_id:196975 EF064310.1 Prosthecochloris vibrioformis str. UdG7005Chp prokMSA_id:227906 AM690784.1 Prosthecochloris vibrioformis J18 prokMSA_id:228965 AM690786.1 Prosthecochloris vibrioformis J27 prokMSA_id:233132 AM690794.2 Prosthecochloris vibrioformis GS8B prokMSA_id:539311 NR_029170.1 Prosthecochloris vibrioformis str. 6030; DSM 260 2.17.4 c__OPB56 30 seqs 2.17.4.1277 OTU 30 seqs prokMSA_id:25315 AF234699.1 sludge clone A12b prokMSA_id:41587 AF445709.1 travertine hot spring clone SM2A12 prokMSA_id:47830 AF445728.1 travertine hot spring clone SM2F06 prokMSA_id:101281 AJ630296.1 electricity-generating microbial fuel cell clone MFC-EB28 prokMSA_id:103210 AY509521.1 freshwater clone LiUU-9-330 prokMSA_id:142737 AB192241.1 termite gut homogenate clone RsTu1-32 prokMSA_id:144037 AB240289.1 microbial structure Phragmites rhizosphere biofilm reed bed reactor laboratory clone RB029 prokMSA_id:144843 AB192129.1 termite gut homogenate clone M1NP2-68 prokMSA_id:160290 DQ520166.1 shal China sequences hypertrophic freshwater lake clone ML-5-66.2 prokMSA_id:160670 DQ520175.1 shal China sequences hypertrophic freshwater lake clone ML-7-70.2 prokMSA_id:201304 AB288926.1 termite gut homogenate clone BOf12-08 prokMSA_id:202747 AB288917.1 termite gut homogenate clone BOf8-10 prokMSA_id:206761 AB286335.1 Reducing production and domination comamonadaceae reducing oxygen supply wastewater treatment procedure food-processing factory activated sludge clone 0105 prokMSA_id:211730 AB286406.1 Reducing production and domination comamonadaceae reducing oxygen supply wastewater treatment procedure food-processing factory activated sludge clone 0334 prokMSA_id:215906 AB286399.1 Reducing production and domination comamonadaceae reducing oxygen supply wastewater treatment procedure food-processing factory activated sludge clone 0327 prokMSA_id:216447 AB286365.1 Reducing production and domination comamonadaceae reducing oxygen supply wastewater treatment procedure food-processing factory activated sludge clone 0138 prokMSA_id:217425 DQ676424.1 Archaeal and plankton freshwater pond suboxic freshwater-pond sediment clone MVS-86 prokMSA_id:219958 EF454675.1 termite hindgut clone 290cost002-P3L-2517 prokMSA_id:239397 EF648021.1 dynamics during produced water treatment aerobic activated sludge clone HB10 prokMSA_id:241876 EF648071.1 dynamics during produced water treatment aerobic activated sludge clone HB70 prokMSA_id:254206 EF648099.1 dynamics during produced water treatment aerobic activated sludge clone HB110 prokMSA_id:255310 EF648096.1 dynamics during produced water treatment aerobic activated sludge clone HB107 prokMSA_id:319737 CU466692.1 Evry wastewater treatment plant anoxic basin clone prokMSA_id:442850 FJ810548.1 Subsurface ecosystem resilience: Long-term attenuation subsurface contaminants supports elaborate eukaryotic food chain and dynamic microbial coal tar waste-contaminated groundwater clone JMYB12-26 prokMSA_id:515456 GQ339136.1 Comprehensive Investigation on Iron Cycling Freshwater Seep ing Microscopy Cultivation and iron(II)-rich seep clone -28 prokMSA_id:529782 GQ339118.1 Comprehensive Investigation on Iron Cycling Freshwater Seep ing Microscopy Cultivation and iron(II)-rich seep clone -04 prokMSA_id:540017 EU662640.1 Productivity- Chemolithoautotrophically Based Sulfidic Karst Systems floating microbial mat sulfidic water clone MC1_16S_71 prokMSA_id:546425 GQ340067.1 Prokaryotic Marathonas Reservoir Greece water column clone A07-09-BAC prokMSA_id:549181 GQ340242.1 Prokaryotic Marathonas Reservoir Greece water column clone VE07-85-BAC prokMSA_id:582049 GU183591.1 Structures Reduced and Oxidized Aquifer lower Aqueous Arsenic Titas Bangladesh arsenic contaminated 85 m deep aquifer clone CME18 2.17.5 c__SJA-28 34 seqs 2.17.5.1278 OTU 34 seqs prokMSA_id:2677 AJ009458.1 chlorobenzene-degrading consortium clone SJA-28 prokMSA_id:60814 AY118152.1 benzene-degrading nitrate-reducing consortium clone Cart-N3 bacterium prokMSA_id:60815 AY118151.1 benzene-degrading nitrate-reducing consortium clone Cart-N2 bacterium prokMSA_id:91225 AY340835.1 sulfate-reducing fluidized-bed reactor clone SR_FBR_L7 prokMSA_id:110165 AY780556.1 ethene-dechlorinating enrichment clone KB-1 2 prokMSA_id:114547 AY953158.1 anaerobic swine lagoon clone B-1AR prokMSA_id:114630 AY953164.1 anaerobic swine lagoon clone B-1AY prokMSA_id:114781 AY953183.1 anaerobic swine lagoon clone B-1Q prokMSA_id:135521 DQ018819.1 Unique Microbial Anaerobic Swine Lagoons anaerobic swine lagoon clone C-156 prokMSA_id:141121 AB192127.1 termite gut homogenate clone M2PT2-67 prokMSA_id:141738 AB240328.1 microbial structure Phragmites rhizosphere biofilm reed bed reactor laboratory clone RB304 prokMSA_id:142772 AB192126.1 termite gut homogenate clone M1NP2-57 prokMSA_id:142961 AB192124.1 termite gut homogenate clone M1PL1-57 prokMSA_id:142983 AB192128.1 termite gut homogenate clone M2PB4-57 prokMSA_id:143014 AB192125.1 termite gut homogenate clone M1NP1-68 prokMSA_id:152291 DQ413085.1 Microbial -dependent and Approaches Anaerobic/Aerobic SBR Reactor EBPR sludge clone 26 prokMSA_id:153791 DQ413108.1 Microbial -dependent and Approaches Anaerobic/Aerobic SBR Reactor EBPR sludge clone 49 prokMSA_id:214114 EF019238.1 aspen rhizosphere clone Elev_16S_414 prokMSA_id:217809 EF515459.1 Electricigen Enrichment MFC upf microbial fuel cell anode clone 24f07 prokMSA_id:217881 EF515392.1 Electricigen Enrichment MFC upf microbial fuel cell anode clone 23g09 prokMSA_id:222624 DQ676315.1 Archaeal and plankton freshwater pond suboxic freshwater-pond sediment clone MVS-13 prokMSA_id:224048 EF515342.1 Electricigen Enrichment MFC upf microbial fuel cell anode clone 23b07 prokMSA_id:225555 EF515460.1 Electricigen Enrichment MFC upf microbial fuel cell anode clone 24f08 prokMSA_id:241447 EF632929.1 Unique microbial contrasting aquatic altitude Andean Altiplano (northern Chile) freshwater sediment clone Pia-s-69 prokMSA_id:321779 EU937887.1 Biogeochemistry Iron Oxidation Circumneutral Freshwater Habitat riparian iron oxidizing biofilm clone 3BR-5BB prokMSA_id:360408 FJ356024.1 Targeted FACS enrichment groups lab scale systems anaerobic:aerobic lab-scale EBPR activated sludge system clone C8 prokMSA_id:513222 GQ264528.1 Structure Simulated Level Waste Site simulated level waste site clone WW3_82 prokMSA_id:563907 GQ390242.1 oxic-anoxic interface meromictic crater lake Lac Pavin clone Eub62B911 prokMSA_id:570335 GQ397011.1 Functional unvegetated perhumid recently-deglaciated soils do not correlate shifts soil clone AK1DE2_03H prokMSA_id:575580 FJ375415.1 T-RFLP powerful tool rapid assessment cells microbial fuel cell sheet carbon cloth anode clone ACS2 prokMSA_id:576459 GQ264345.1 Structure Simulated Level Waste Site simulated level waste site clone WW2_182 prokMSA_id:580376 GQ264412.1 Structure Simulated Level Waste Site simulated level waste site clone WW3_10 prokMSA_id:586390 FJ710747.1 Abundance and microbial long-term operated anammox biofilm reactors initiated inocula anaerobic ammonium oxidation reactor clone Dok28 prokMSA_id:588073 GQ356164.1 biomarkers ammonia oxidation activity anaerobic ammonium-oxidation (Anammox) bio-reactor clone 5GA_Pla_HKP_17 2.17.6 c__SM1B02 9 seqs 2.17.6.1279 OTU 9 seqs prokMSA_id:38651 AF445706.1 travertine hot spring clone SM2A03 prokMSA_id:51942 AF445704.1 travertine hot spring clone SM1H06 prokMSA_id:74839 AF445663.1 travertine hot spring clone SM1C06 prokMSA_id:88021 AY293405.1 travertine terrace Yellowstone Hot Springs clone SM2B09 prokMSA_id:203568 EF205470.1 among geographically regions central Tibet geothermal spring mat clone YCB56 prokMSA_id:203892 EF205563.1 among geographically regions central Tibet geothermal spring mat clone TP99 prokMSA_id:212646 EF205522.1 among geographically regions central Tibet geothermal spring mat clone DTB149 prokMSA_id:213721 EF205537.1 among geographically regions central Tibet geothermal spring mat clone DTB33 prokMSA_id:214442 EF205451.1 among geographically regions central Tibet geothermal spring mat clone YCB44 2.17.7 c__SM1H02 4 seqs 2.17.7.1280 OTU 4 seqs prokMSA_id:46550 AF445702.1 green sulfur clone SM1H02 prokMSA_id:99903 AY741701.1 borehole water gold mine clone TTMF57 prokMSA_id:106021 AY555793.1 Bor Khlueng hot spring clone PK74 prokMSA_id:134457 DQ088767.1 subsurface clone BE325FW032701CTS_hole1-17 2.17.8 c__ZB1 70 seqs 2.17.8.1281 OTU 70 seqs prokMSA_id:40844 AF314435.1 aerobic sludge clone PHOS-HE36 prokMSA_id:64878 AJ412669.1 denitrifying reactor clone 19 prokMSA_id:88595 AY327874.1 surface vent snail foot clone SF_C4-C6 prokMSA_id:91023 AY340841.1 sulfate-reducing fluidized-bed reactor clone SR_FBR_L83 prokMSA_id:98997 AJ428454.1 Saltmarsh mud clone K-790 prokMSA_id:99725 AY548931.1 ANAMMOX sludge clone 1-2 prokMSA_id:99743 AY741700.1 borehole water gold mine clone TTMF87 prokMSA_id:99883 AY548932.1 ANAMMOX sludge clone 1-3 prokMSA_id:100218 AY741703.1 borehole water gold mine clone TTMF84 prokMSA_id:101101 AB186805.1 polychlorinated dioxin dechlorinating microcosm clone TSAC14 prokMSA_id:101263 AB186806.1 polychlorinated dioxin dechlorinating microcosm clone TSBW05 prokMSA_id:101598 AB186808.1 polychlorinated dioxin dechlorinating microcosm clone TSBX31 prokMSA_id:107516 AJ428451.1 Beach mud clone K-249 prokMSA_id:109186 AB195898.1 Anaerobic sludge clone N25 prokMSA_id:109187 AB195899.1 Anaerobic sludge clone N58 prokMSA_id:137219 DQ079647.1 deep terrestrial subsurface fluid-filled fracture clone EV818FW062101BH4MD12 prokMSA_id:142070 AB240352.1 microbial structure Phragmites rhizosphere biofilm reed bed reactor laboratory clone RB358 prokMSA_id:147607 DQ337042.1 subsurface water clone EV818EB5CPSAJJ39 prokMSA_id:149540 AY945880.1 Thauera and Azoarcus functionally important genera denitrifying quinoline-removal microbial structure sludge-seeded bioreactor clone SS-75 prokMSA_id:149719 AB234252.1 Biotransformation Polychlorinated Dioxins Microbial Dynamics Sediment Microcosms Contamination Levels sediment and soil clone LS4-176 prokMSA_id:149985 AB234253.1 Biotransformation Polychlorinated Dioxins Microbial Dynamics Sediment Microcosms Contamination Levels sediment and soil clone LS4-264 prokMSA_id:151437 DQ404821.1 contaminated sediment clone 655949 prokMSA_id:154683 DQ404811.1 contaminated sediment clone 655939 prokMSA_id:158118 DQ415830.1 Microbial populations limestone-corroding biofilms system Italy Frasassi sulfidic cave stream biofilm clone zEL36 prokMSA_id:171301 DQ289911.1 Microbial Carbon and Nitrogen Cycling Sediments South Atlantic Bight Permeable Shelf Sediment clone LC3-28 prokMSA_id:213866 EF203206.1 phylotypes sediments Lake Kastoria Greece sediment clone Kas175B prokMSA_id:216233 EF467561.1 situ microelectrode voltammetry sulfur-oxidizing biofilms Frasassi sulfidic cave stream biofilm clone lka62 prokMSA_id:229220 EF584532.1 mixed granule anammox reactor clone KIST-JJY012 prokMSA_id:236116 EF562135.1 Subsurface microbial deep-granitic-fracture water colorado Henderson Molybdenum Mine clone 7150D1B27 prokMSA_id:240724 EF648160.1 dynamics during produced water treatment aerobic activated sludge clone XJ118 prokMSA_id:247813 AB355060.1 Monitoring and archaeal two heavy polluted areas lake Egypt based on sediment Manzallah Lake clone Baqar.Sed.Eubac.11 prokMSA_id:252875 DQ925883.1 Microbes and Thermal Gradients Temperature Hydrothermal Chimneys hydrothermal vent chimneys Guaymas Basin clone 21B12 prokMSA_id:255151 EU234260.1 river and un techniques downstream Wang Yang River receiving penicillin G production wastewater clone C49 prokMSA_id:255842 EU101178.1 Sulfide/oxygen supply ratio predicts outcome competition among sulfur-oxidizing waters Frasassi sulfidic cave stream biofilm clone PC06110_B84 prokMSA_id:256995 EF562071.1 Subsurface microbial deep-granitic-fracture water colorado Henderson Molybdenum Mine clone 7025P4B42 prokMSA_id:261440 AB354625.1 Laminated iron texture iron-oxidizing calcite travertine iron-rich deposit clone FD016 prokMSA_id:265844 EU385696.1 Stratified microbes sediments Core MD05-2896 subseafloor sediment South China Sea clone MD2896-B81 prokMSA_id:269562 AB354621.1 Laminated iron texture iron-oxidizing calcite travertine iron-rich deposit clone FD012 prokMSA_id:278344 EU283596.1 Model Early Earth Harbors Deeply Divergent Divisions Anderson Lake clone A309 prokMSA_id:282378 EU644107.1 and Samoylov Island Lena active layer -centred polygon near permafrost table; Rim_Bottom clone LD_RB_34 prokMSA_id:286925 EU644235.1 and Samoylov Island Lena active layer -centred polygon near surface horizon; Rim_Top clone LD_Ba_Top_B38 prokMSA_id:287235 EF687501.1 Biogeochemistry iron- and sulfur-precipitating microbial mats (Nile Mediterranean) sediment underneath iron-oxidizing mat Chefren mud volcano Nile Deep Sea Fan Eastern Mediterranean clone 113B496 prokMSA_id:303957 EU888817.1 Decreased activity stable microbial propionate-fed without supplied tungsten molybdenum and selenium UASB reactor clone B18 prokMSA_id:308112 EU937867.1 Biogeochemistry Iron Oxidation Circumneutral Freshwater Habitat riparian iron oxidizing biofilm clone 3BR-11E prokMSA_id:337082 EU937844.1 Biogeochemistry Iron Oxidation Circumneutral Freshwater Habitat riparian iron oxidizing biofilm clone 3BR-3G prokMSA_id:349677 EU888816.1 Decreased activity stable microbial propionate-fed without supplied tungsten molybdenum and selenium UASB reactor clone B14 prokMSA_id:363429 FJ416082.1 sediments sediment station NEC5 Northern Bering Sea clone 014K15 prokMSA_id:509234 GQ246303.1 Temporal and spatial China North Yel Sea sediments clone Sd1-22 prokMSA_id:511393 FJ712518.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-10-B34 prokMSA_id:517364 GU369881.1 and mats vents Arc white filamentous microbial mat photic shal hydrothermal vent region on Volcano 1 South Tonga Arc. depth=115.3 m clone V1SC07b155 prokMSA_id:537434 GQ472354.1 Microbial Dongping Lake lake sediment clone 3S4-6 prokMSA_id:540639 FJ710780.1 Abundance and microbial long-term operated anammox biofilm reactors initiated inocula anaerobic ammonium oxidation reactor clone Dok61 prokMSA_id:547407 FJ545477.1 Diveristy Seawater and Sediment Northern North Yel Sea sediment clone S1-48 prokMSA_id:549902 AM997483.1 and biogeography deep-sea surface sediments South Ocean Atlantic Ocean:South-Atlantic OceanAngola Basin clone Ulrdd_17 prokMSA_id:555979 FJ710727.1 Abundance and microbial long-term operated anammox biofilm reactors initiated inocula anaerobic ammonium oxidation reactor clone Dok08 prokMSA_id:556862 FJ517025.1 semiarid 'Tablas de Daimiel National Park' wetland (Central Spain) unravelled water clone TDNP_Wbc97_164_1_56 prokMSA_id:557902 AM490702.1 Linking and functional nutrient spiraling mats (USA) microbial mat sulfidic cave spring Lower Kane Cave Big Horn LKC22 clone SS_LKC22_UB85 prokMSA_id:564034 AM490707.1 Linking and functional nutrient spiraling mats (USA) microbial mat sulfidic cave spring Lower Kane Cave Big Horn LKC22 clone SS_LKC22_UB50 prokMSA_id:564429 AM997499.1 and biogeography deep-sea surface sediments South Ocean Atlantic Ocean:South-Atlantic OceanAngola Basin clone Ulrdd_35 prokMSA_id:566425 FJ710726.1 Abundance and microbial long-term operated anammox biofilm reactors initiated inocula anaerobic ammonium oxidation reactor clone Dok07 prokMSA_id:570043 AB478415.1 Chlorobi mats isolate Mat9-16Chlorobi str. Mat9-16 prokMSA_id:572568 AM997556.1 and biogeography deep-sea surface sediments South Ocean Atlantic Ocean:South-Atlantic OceanCape Basin clone Ucd1554 prokMSA_id:572705 FJ710742.1 Abundance and microbial long-term operated anammox biofilm reactors initiated inocula anaerobic ammonium oxidation reactor clone Dok23 prokMSA_id:575810 FJ517012.1 semiarid 'Tablas de Daimiel National Park' wetland (Central Spain) unravelled water clone TDNP_Wbc97_132_1_39 prokMSA_id:577176 AB486936.1 Microbial populations responsive denitrification-inducing conditions rice paddy soil clone TSCOR003_J21 prokMSA_id:578784 GQ487886.1 Microbial metal soil polluted heavy metals clone T1-6 prokMSA_id:588053 FN429794.1 Biogeochemistry -activity cold seep Larsen B area western Weddell Sea Antarctica marine sediments (1.1 mbsf) 850 m water depth clone ANTXXIII_706-4_Bac44 prokMSA_id:589318 GQ354947.1 structure between two geochemically distinct springs Alum Rock Park spring clone 4-103 prokMSA_id:590755 FJ710761.1 Abundance and microbial long-term operated anammox biofilm reactors initiated inocula anaerobic ammonium oxidation reactor clone Dok42 prokMSA_id:591641 FJ710734.1 Abundance and microbial long-term operated anammox biofilm reactors initiated inocula anaerobic ammonium oxidation reactor clone Dok15 2.18 p__Chloroflexi 2976 seqs 2.18.1 Unclassified 22 seqs 2.18.1.1282 OTU 22 seqs prokMSA_id:78594 AJ536886.1 uranium mining waste pile soil clone JG30-KF-AS1 prokMSA_id:100475 AJ536891.1 uranium mining waste pile soil clone JG30-KF-CM64 prokMSA_id:136311 DQ125701.1 uranium contaminated soil clone AKAU3793 prokMSA_id:161537 DQ450734.1 Microbial Alpine Tundra Wet Meadow Soil: Chloroflexi Cold Water-Saturated saturated alpine tundra wet meadow soil 0-20 cm clone C12_WMSP1 prokMSA_id:203315 DQ490003.1 Microbial Great Boiling Spring sediment hot spring; temperature 80 C clone GBS_L1_C06 prokMSA_id:210026 EF019505.1 aspen rhizosphere clone Elev_16S_1007 prokMSA_id:211287 EF019715.1 aspen rhizosphere clone Elev_16S_881 prokMSA_id:213345 EF019508.1 aspen rhizosphere clone Elev_16S_1010 prokMSA_id:215100 EF018295.1 aspen rhizosphere clone Amb_16S_656 prokMSA_id:217784 EF516466.1 grassland soil clone FCPS455 prokMSA_id:223797 EF516615.1 grassland soil clone FCPT647 prokMSA_id:229483 EF590043.2 changes structure sediments Songhua River contaminated nitrobenzene -DGGE cloning and sequencing nitrobenzene-contaminated river sediment clone A12 prokMSA_id:239682 EU134253.1 tallgrass prarie soil clone FFCH5969 prokMSA_id:240028 EU134235.1 tallgrass prarie soil clone FFCH18179 prokMSA_id:251901 EU133948.1 tallgrass prarie soil clone FFCH5929 prokMSA_id:511930 FJ478576.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p9o12ok prokMSA_id:512873 FJ746136.1 Microbial oligotrophic marine sediments: South Pacific Gyre ocean sediment 5306 m water depth during Cruise Knox02rr clone SPG12_343_353_B54 prokMSA_id:537694 GQ214089.1 China loess clone P418 prokMSA_id:543362 AM997775.1 and biogeography deep-sea surface sediments South Ocean Atlantic Ocean:South-Atlantic OceanGuinea Basin clone Ucb15112 prokMSA_id:543849 FJ746106.1 Microbial oligotrophic marine sediments: South Pacific Gyre ocean sediment 5306 m water depth during Cruise Knox02rr clone SPG12_343_353_B17 prokMSA_id:565783 FJ595536.1 rock Black Canyon New Mexico: and Geochemistry rocks no varnish clone NV50_2f6 prokMSA_id:567811 FN545887.2 un 2 Rupi basin Bulgaria hot spring clone S2R-176 2.18.10 c__Thermomicrobia 60 seqs 2.18.10.1 Unclassified 3 seqs 2.18.10.1.1341 OTU 3 seqs prokMSA_id:1282 M34115.1 Thermomicrobium roseum prokMSA_id:20892 AJ420142.1 Sphaerobacter thermophilus prokMSA_id:528078 CP001824.1 Sphaerobacter thermophilus str. DSM 20745 2.18.10.2 o__HN1-15 42 seqs 2.18.10.2.1342 OTU 42 seqs prokMSA_id:85874 AY250886.1 Antarctic cryptoendolith clone FBP471 prokMSA_id:90766 AY221598.1 lead-contaminated soil clone HN1-15 prokMSA_id:137866 DQ129389.1 microarray level air two cities Texas urban aerosol clone AKIW710 prokMSA_id:205052 EF018623.1 aspen rhizosphere clone Amb_16S_902 prokMSA_id:213308 EF018629.1 aspen rhizosphere clone Amb_16S_909 prokMSA_id:247448 EU134180.1 tallgrass prarie soil clone FFCH3294 prokMSA_id:247875 EF157268.1 Microbial natural asphalts rancho la brea heavy oil seeps Rancho La Brea tar pits clone 101-124 prokMSA_id:416106 GQ114855.1 Topographical and Temporal Human Skin Microbiome skin interdigital web space clone nbw684b08c1 prokMSA_id:418721 GQ114789.1 Topographical and Temporal Human Skin Microbiome skin interdigital web space clone nbw683d10c1 prokMSA_id:445772 GQ114903.1 Topographical and Temporal Human Skin Microbiome skin interdigital web space clone nbw684f11c1 prokMSA_id:508084 GQ001578.1 Topographical and Temporal Human Skin Microbiome skin buttock clone nbu174g02c1 prokMSA_id:509610 FJ478561.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p22k10ok prokMSA_id:513420 FJ671248.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-6D17 prokMSA_id:514898 FJ675508.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk west pen 301; was negative STEC O157 clone LL141-8H3 prokMSA_id:515513 FJ672861.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk east pen 301; was negative STEC O157 clone Ll142-7L15 prokMSA_id:516783 FJ671567.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-8J9 prokMSA_id:517684 FJ671538.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-8G9 prokMSA_id:519054 FJ671105.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-4O4 prokMSA_id:519841 FJ671445.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-7K3 prokMSA_id:520017 FJ674762.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk west pen 301; was negative STEC O157 clone LL141-5D12 prokMSA_id:520514 FJ672040.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk east pen 301; was negative STEC O157 clone Ll142-2N9 prokMSA_id:521078 FJ672612.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk east pen 301; was negative STEC O157 clone Ll142-5N3 prokMSA_id:521339 FJ671049.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-4H17 prokMSA_id:521433 FJ670641.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-1B1 prokMSA_id:522738 FJ670986.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-3P14 prokMSA_id:523561 FJ671519.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-8F11 prokMSA_id:525520 FJ672149.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk east pen 301; was negative STEC O157 clone Ll142-3D2 prokMSA_id:526791 FJ672690.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk east pen 301; was negative STEC O157 clone Ll142-7C13 prokMSA_id:527277 FJ671960.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk east pen 301; was negative STEC O157 clone Ll142-2K15 prokMSA_id:527429 FJ672097.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk east pen 301; was negative STEC O157 clone Ll142-3A9 prokMSA_id:527881 FJ671254.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-6E17 prokMSA_id:527940 FJ672734.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk east pen 301; was negative STEC O157 clone Ll142-7E19 prokMSA_id:528174 FJ672381.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk east pen 301; was negative STEC O157 clone Ll142-3P23 prokMSA_id:529508 FJ672099.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk east pen 301; was negative STEC O157 clone Ll142-3B11 prokMSA_id:530046 FJ671502.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-8C9 prokMSA_id:532051 FJ672720.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk east pen 301; was negative STEC O157 clone Ll142-7D3 prokMSA_id:532294 FJ671190.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-5J4 prokMSA_id:534516 AM935498.1 Dynamics during identified and SSU libraries pilot-scale bioremediation process hydrocarbon-contaminated soil clone AMHA11 prokMSA_id:542927 CU920279.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549954 EU786123.1 cotton rhizosphere soil clone 3H-24 prokMSA_id:565457 AM935396.1 Dynamics during identified and SSU libraries pilot-scale bioremediation process hydrocarbon-contaminated soil clone AMGD10 prokMSA_id:566611 FJ894331.1 Matriptase-deficient mice exhibit ichthyotic selective shift skin microbiota B2E; ear punch biopsy C57BL/6J mouse (2 weeks) clone nbt38h04 2.18.10.3 o__Thermomicrobiales 15 seqs 2.18.10.3.1343 OTU 15 seqs prokMSA_id:113628 AY921935.1 farm soil clone AKYG1722 prokMSA_id:192580 DQ988318.1 Microbial lab-scale A1-A2-O fixed biofilm system coking wastewater treatment without effluent recirculation A2 reactor clone LR A2-37 prokMSA_id:349986 EU979025.1 Effects intercropping Rhizobium inoculation on microbial biomass and rhizosphere bean (Vicia faba L.) soil clone g16 prokMSA_id:516459 FJ671223.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-5P11 prokMSA_id:516482 GU444071.1 Effects amendments on fertility and microbial structure cucumber Cucumis sativus L. production systems cotton straw treated soil clone 0-121 prokMSA_id:535766 GQ263151.1 Structure Simulated Level Waste Site simulated level waste site clone F3_07X prokMSA_id:537122 GQ263202.1 Structure Simulated Level Waste Site simulated level waste site clone F3_170X prokMSA_id:538027 GQ263073.1 Structure Simulated Level Waste Site simulated level waste site clone F2_22X prokMSA_id:540426 GQ263075.1 Structure Simulated Level Waste Site simulated level waste site clone F2_24X prokMSA_id:573695 GQ263007.1 Structure Simulated Level Waste Site simulated level waste site clone F2_131X prokMSA_id:574014 GQ262998.1 Structure Simulated Level Waste Site simulated level waste site clone F2_120X prokMSA_id:574150 GQ263638.1 Structure Simulated Level Waste Site simulated level waste site clone FW3_25C prokMSA_id:578531 GQ263645.1 Structure Simulated Level Waste Site simulated level waste site clone FW3_32C prokMSA_id:581778 GQ263087.1 Structure Simulated Level Waste Site simulated level waste site clone F2_37X prokMSA_id:586747 GQ262935.1 Structure Simulated Level Waste Site simulated level waste site clone F1_78X 2.18.11 c__TK-SH13 6 seqs 2.18.11.1344 OTU 6 seqs prokMSA_id:166792 DQ463736.2 distinct Lake Tanganyika anoxic hypolimnion clone TK-SH13 prokMSA_id:166969 DQ463703.2 distinct Lake Tanganyika anoxic hypolimnion clone TK-SH14 prokMSA_id:167200 DQ463718.2 distinct Lake Tanganyika anoxic hypolimnion clone TK-SH12 prokMSA_id:534687 FJ901603.1 phreatic limestone sinkholes northeastern Mexico biomat 30m deep cenote La Palita clone LP30MUD46 prokMSA_id:569642 FJ901566.1 phreatic limestone sinkholes northeastern Mexico biomat 30m deep cenote La Palita clone LP30MUD12 prokMSA_id:590688 FJ901504.1 phreatic limestone sinkholes northeastern Mexico biomat 80m deep cenote La Palita clone LP80MB14 2.18.12 c__TK17 55 seqs 2.18.12.1345 OTU 55 seqs prokMSA_id:60159 AJ347055.1 sponge clone TK10 prokMSA_id:60171 AJ347037.1 sponge clone TK18 prokMSA_id:65691 AF507693.1 forest soil clone S085 prokMSA_id:78515 AJ536892.1 uranium mining waste pile soil sample clone JG30-KF-CM66 prokMSA_id:88342 AY289463.1 soil clone ABS-705 prokMSA_id:101541 AY753393.1 heating system biofilm clone SK47 prokMSA_id:106084 AB186887.1 polychlorinated dioxin dechlorinating microcosm clone TSAC19 prokMSA_id:106392 AB186889.1 polychlorinated dioxin dechlorinating microcosm clone TSBW02 prokMSA_id:143212 AB240231.1 microbial structure rhizosphere Phragmites bulk soil reed bed reactor laboratory clone BS027 prokMSA_id:144409 AB240237.1 microbial structure rhizosphere Phragmites bulk soil reed bed reactor laboratory clone BS047 prokMSA_id:171924 AM292613.1 Influence uranyl and sodium nitrate on natural soil uranium mining waste pile clone JG35-K4-KF37 prokMSA_id:206654 EF019820.1 aspen rhizosphere clone Elev_16S_1165 prokMSA_id:211460 EF019364.1 aspen rhizosphere clone Elev_16S_587 prokMSA_id:211886 EF019237.1 aspen rhizosphere clone Elev_16S_412 prokMSA_id:225280 AB300114.1 Wide ancient microbial DNAs Quaternary sediments holocene mud sediment clone KM22B-112 prokMSA_id:226062 EF516790.1 grassland soil clone FCPS761 prokMSA_id:226939 DQ676319.1 Archaeal and plankton freshwater pond suboxic freshwater-pond sediment clone MVS-19 prokMSA_id:238509 EU134034.1 tallgrass prarie soil clone FFCH13858 prokMSA_id:239300 EU134236.1 tallgrass prarie soil clone FFCH18205 prokMSA_id:239349 EF157231.1 Microbial natural asphalts rancho la brea heavy oil seeps Rancho La Brea tar pits clone 101-103 prokMSA_id:241504 EU335161.1 Changes microbial metabolic and along hydrogeochemically variable profile saturated C horizon soil aggregate clone BacC-s_059 prokMSA_id:249501 EU287395.1 Pacific arctic surface sediment clone S26-95 prokMSA_id:252766 EU133975.1 tallgrass prarie soil clone FFCH4456 prokMSA_id:253298 EU134263.1 tallgrass prarie soil clone FFCH9620 prokMSA_id:255100 EF076076.1 Sponge- microorganisms: evolution ecology and biotechnological potential Bahamas: Little San Salvador Island clone PK030 prokMSA_id:255513 DQ837236.1 Archaeal and pristine National Park Spain Donana coastal aquifer clone 49S1_2B_10 prokMSA_id:273805 EU386131.1 Biogeographical and microbes sediments on subseafloor sediment South China Sea clone MD2905-B20 prokMSA_id:329203 FJ153023.1 Changes populations drained extreme soil (Mexico) alkaline saline soils former lake Texcoco clone TX4CB_154 prokMSA_id:353248 EU035922.2 Insight microbial structure Norwegian deep-water Desmacidon sponge deep-sea coral reef off Norway clone KspoA5 prokMSA_id:509862 GQ263110.1 Structure Simulated Level Waste Site simulated level waste site clone F2_61X prokMSA_id:510580 FJ478896.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p7e17ok prokMSA_id:511335 GQ356177.1 biomarkers ammonia oxidation activity anaerobic ammonium-oxidation (Anammox) bio-reactor clone 5GA_Pla_HKP_31 prokMSA_id:536088 CU921049.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537677 AM936878.1 Dynamics during identified and SSU libraries pilot-scale bioremediation process hydrocarbon-contaminated soil clone CM14D4 prokMSA_id:544308 GQ263144.1 Structure Simulated Level Waste Site simulated level waste site clone F2_97X prokMSA_id:548487 GQ264142.1 Structure Simulated Level Waste Site simulated level waste site clone WC3_83 prokMSA_id:554992 GU118592.1 Threatened Corals Provide Microbial Habitats clone Mfav_D06 prokMSA_id:559741 FJ444674.1 Cotton Rhizosphere cotton rhizosphere clone 2y-34 prokMSA_id:560792 AM934855.1 Dynamics during identified and SSU libraries pilot-scale bioremediation process hydrocarbon-contaminated soil clone AMJA2 prokMSA_id:565406 GQ263292.1 Structure Simulated Level Waste Site simulated level waste site clone FW1_a39 prokMSA_id:567113 GQ263153.1 Structure Simulated Level Waste Site simulated level waste site clone F3_09X prokMSA_id:568917 GQ264467.1 Structure Simulated Level Waste Site simulated level waste site clone WW3_173 prokMSA_id:569197 CU927307.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:569476 AM934722.1 Dynamics during identified and SSU libraries pilot-scale bioremediation process hydrocarbon-contaminated soil clone AMNC2 prokMSA_id:571700 GQ264295.1 Structure Simulated Level Waste Site simulated level waste site clone WW2_113 prokMSA_id:573402 GQ356158.1 biomarkers ammonia oxidation activity anaerobic ammonium-oxidation (Anammox) bio-reactor clone 5GA_Pla_HKP_11 prokMSA_id:577544 GQ264238.1 Structure Simulated Level Waste Site simulated level waste site clone WW1_b36 prokMSA_id:579997 GQ263188.1 Structure Simulated Level Waste Site simulated level waste site clone F3_147X prokMSA_id:582010 GQ262892.1 Structure Simulated Level Waste Site simulated level waste site clone F1_52X2 prokMSA_id:582300 FJ481270.1 Microbes marine sponges sponge tissue clone XB1A10F prokMSA_id:583206 GQ263261.1 Structure Simulated Level Waste Site simulated level waste site clone F3_91X prokMSA_id:583310 FJ481340.1 Microbes marine sponges sponge tissue clone XB3G04F prokMSA_id:587291 GQ402693.1 Accessing microbial biodiversity and metabolic potential tropical -based approach peat swamp forest soil clone PW219 prokMSA_id:592776 FJ481356.1 Microbes marine sponges sponge tissue clone XD2C08 prokMSA_id:593587 GQ263066.1 Structure Simulated Level Waste Site simulated level waste site clone F2_189X 2.18.2 c__Anaerolineae 2102 seqs 2.18.2.1 Unclassified 73 seqs 2.18.2.1.1283 OTU 73 seqs prokMSA_id:1285 AF027036.1 hot spring clone OPB65 prokMSA_id:1297 AF018195.1 hot spring clone env.OPS12 prokMSA_id:2710 AJ009480.1 chlorobenzene-degrading consortium clone SJA-101 prokMSA_id:18359 AF445735.1 travertine hot spring clone SM2G02 prokMSA_id:38185 AF395429.1 digester sludge-inoculated acetate-enriched culture clone Eub No. 13 prokMSA_id:52019 AF445746.1 travertine hot spring clone SM2H10 prokMSA_id:55534 AJ306746.2 DCP-dechlorinating consortium clone SHA-36 prokMSA_id:66949 AJ306740.1 DCP-dechlorinating consortium clone SHA-2 prokMSA_id:67038 AJ306741.2 DCP-dechlorinating consortium clone SHA-8 prokMSA_id:71233 AF419669.1 Guaymas Basin hydrothermal sediment clone a2b029 prokMSA_id:71882 AF419699.1 Guaymas Basin hydrothermal sediment clone C1_B046 prokMSA_id:72140 AF419666.1 Guaymas Basin hydrothermal sediment clone a1b007 prokMSA_id:74684 AF445659.1 travertine hot spring clone SM1B12 prokMSA_id:81161 AY214200.1 benzene-contaminated groundwater clone ZZ14AC19 prokMSA_id:97847 AY211664.1 Gulf Mexico seafloor sediment clone GoM GC185 546E prokMSA_id:100356 AY592648.1 deep-sea mud volcano clone Napoli-2B-24; BC07-2B-24 prokMSA_id:100980 AY548939.1 ANAMMOX sludge clone 1-20 prokMSA_id:102678 AY426459.1 full-scale anaerobic UASB bioreactor treating paper mill wastewater clone E15 prokMSA_id:103240 AJ431246.1 Dehalococcoides sp. str. BHI80-15 prokMSA_id:103391 AJ431247.1 Dehalococcoides sp. str. BHI80-52 prokMSA_id:105414 AY592658.1 deep-sea mud volcano clone Napoli-2B-36; BC07-2B-36 prokMSA_id:111913 AY704393.1 oceanic crust clone FS118-10B-02 prokMSA_id:112747 AY921982.1 farm soil clone AKYG1747 prokMSA_id:113223 AY542198.1 Gulf Mexico seafloor sediments clone GoM HDB-07 prokMSA_id:113374 AY921832.1 farm soil clone AKYG1561 prokMSA_id:114347 AY921711.1 farm soil clone AKYG535 prokMSA_id:114374 AY921833.1 farm soil clone AKYG408 prokMSA_id:141414 AB240223.1 microbial structure Phragmites rhizosphere biofilm reed bed reactor laboratory clone RB520 prokMSA_id:153171 DQ394948.1 harbor sediment clone VHS-B3-54 prokMSA_id:159186 DQ329898.1 Guerrero Negro hypersaline mat clone 02D2Z14 prokMSA_id:162841 DQ811858.1 mangrove soil clone MSB-3F12 prokMSA_id:163647 DQ833486.1 detected analyses depth sediment Guanting Reservoir clone 35-26 prokMSA_id:166011 DQ787716.1 holocene lake sediment clone SLB621 prokMSA_id:169619 DQ811868.1 mangrove soil clone MSB-3E6 prokMSA_id:181252 EF061970.1 Xiamen China mangrove sediment clone XME40 prokMSA_id:185193 EF125425.1 mangrove soil clone MSB-2B11 prokMSA_id:200559 EF208701.1 Vertical and horizontal structure microbial sandy carbonate sediment clone CI75cm.2.05 prokMSA_id:208032 EF203180.1 phylotypes sediments Lake Kastoria Greece sediment clone Kas19B prokMSA_id:219143 EF515515.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 29e03 prokMSA_id:220036 AB300102.1 Wide ancient microbial DNAs Quaternary sediments holocene mud sediment clone KM35B-225 prokMSA_id:220556 EF515619.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 31b03 prokMSA_id:222764 EF515524.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 29f05 prokMSA_id:223745 AB300063.1 Wide ancient microbial DNAs Quaternary sediments holocene mud sediment clone SK27B-40 prokMSA_id:252718 EU246317.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P6-G11 prokMSA_id:255643 EU181507.1 Prokaryotic enhanced organic matter remineralization continental margin marine sediments clone 5bav_G2 prokMSA_id:260028 EU385730.1 Stratified microbes sediments Core MD05-2896 subseafloor sediment South China Sea clone MD2896-B127 prokMSA_id:260455 EU542451.1 Effects chemical structure concentration on pathways microbial during dechlorination coplanar PCBs slurries sediment and soil slurry clone Er-MS-85 prokMSA_id:267008 AB426184.1 -situ identification study benzene-degrading s under methanogenic condition anaerobic benzene degrading enrichment which was d lotus field soil clone mbI-b2 prokMSA_id:274098 EU385891.1 Stratified microbes sediments Core MD05-2902 subseafloor sediment South China Sea clone MD2902-B73 prokMSA_id:289753 AM745150.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Bac49 prokMSA_id:324201 EU812967.1 Microbial structure mesophilic reactors biogas reactor fed corn silage clone TUM-Mbac-MR4-B1-KC34 prokMSA_id:348818 FJ264582.1 Manganese and Iron Dependent Anaerobic Oxidation Methane methane seep sediment clone Mn3b-B23 prokMSA_id:350011 EU915265.1 metagenome bulk agricultural field fresh water near pulp and paper mill effluent irrigated fields soil clone CS1 prokMSA_id:533160 EU488302.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_2C4_13 prokMSA_id:538177 CU921477.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:548078 CU921294.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549377 CU925260.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549453 GU056083.1 Biologic Techniques Applied Microbial Prospecting China: Ban 876 Gas Oil Field Being Used Example soil above gas and oil field clone DGS2-2 prokMSA_id:549880 EU487924.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_1C2_22 prokMSA_id:550209 FJ873274.1 Vertical and archaea methane-rich cold seep located base sediments Okhotsk Sea clone bOHTK-16 prokMSA_id:552873 CU918240.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:553193 CU921045.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555085 GU180178.1 Impact coplanar PCBs on microbial activity anaerobic estuarine sediments sediment and soil slurry clone Er-LAYS-133 prokMSA_id:555305 GQ472370.1 Microbial Dongping Lake lake sediment clone 3S2-21 prokMSA_id:563339 FM955656.1 Study Prokaryotic Some Selected Niches Western Ghats India water clone BCWCSP1G2 prokMSA_id:565887 EU488227.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_2C3_89 prokMSA_id:567707 FJ977397.1 population effluent treated soil clone CS9 prokMSA_id:568674 CU921586.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:569732 EU488102.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_1C5_1 prokMSA_id:570460 EU488262.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_2C3_124 prokMSA_id:574788 AB525472.1 Segregated ANME-1 and -2 cold-seep marine sediments deep-sea methane seep sediment off Joetsu Japan Sea clone UT06_10_52B_68 prokMSA_id:576076 FJ437962.1 Benthic okenone production Fayetteville New York Green Lake surface sediments 16.5 m water depth clone FGL7S_B100 prokMSA_id:581297 GQ461665.1 Coupling -ITS Clone Libraries and Automated Intergenic Spacer Microbial Bioremediation TCE clone WC11 2.18.2.10 o__GCA004 33 seqs 2.18.2.10.1304 OTU 33 seqs prokMSA_id:1295 AF154100.1 hydrocarbon seep clone GCA112 prokMSA_id:1296 AF154104.1 hydrocarbon seep clone GCA004 prokMSA_id:72863 AJ441227.1 hydrothermal vent polychaete mucous clone P. palm C 37 prokMSA_id:103430 AY592319.1 deep-sea mud volcano clone Amsterdam-1B-14; BC20-1B-14 prokMSA_id:105092 AY592355.1 deep-sea mud volcano clone Amsterdam-1B-54; BC20-1B-54 prokMSA_id:135041 AY592889.1 deep-sea active cold seep Mud Milano mud volcano Eastern Mediterranean 1958m water depth: deep sea microbial mat 5mu filter fraction clone Milano-WF1B-48 prokMSA_id:135148 AY592415.1 deep-sea mud volcano clone Amsterdam-2B-58; BC20-2B-58 prokMSA_id:150580 AY592417.1 microbial deep-sea volcanoes eastern species or conservation function concept Amsterdam mud volcano Eastern Mediterranean 1995m water depth: sediment layer 14-31 cm clone Amsterdam-2B-60; BC20-2B-60 prokMSA_id:160160 DQ521808.1 Anaerobic Methane Oxidizing ANME-1b Archaea Hypersaline Sediments Gulf Mexico sediments clone SMI1-GC205-Bac84 prokMSA_id:182748 EF125407.1 soil naked tidal flat sediment near mangrove clone MSB-1E5 prokMSA_id:244008 EU245299.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H5-F01 prokMSA_id:253945 EU050928.1 libraries sediment Kings Bay Svalbard Arctic clone SS1_B_03_41 prokMSA_id:269159 AM943597.1 Microbial dolomite formation Lagoa Vermelha Brazil carbonaceous sediments hypersaline lagoon clone LV-Bac62 prokMSA_id:274885 EU491096.1 Abundance and microbial life ocean crust seafloor lavas Loi'hi Seamount Pisces Peak X2 clone P9X2b3A11 prokMSA_id:295726 AM745166.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Bac69 prokMSA_id:303331 AM745167.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Bac84 prokMSA_id:319179 FJ264751.1 Manganese and Iron Dependent Anaerobic Oxidation Methane methane seep sediment clone livecontrolB17 prokMSA_id:323817 FJ264602.1 Manganese and Iron Dependent Anaerobic Oxidation Methane methane seep sediment clone Mn3b-B1 prokMSA_id:351323 FJ264746.1 Manganese and Iron Dependent Anaerobic Oxidation Methane methane seep sediment clone livecontrolB12 prokMSA_id:353087 EU925873.1 sediments sediment station DBS1 northern Bering Sea clone 076F60 prokMSA_id:510365 GQ246419.1 Temporal and spatial China North Yel Sea sediments clone Ld1-24 prokMSA_id:533419 GQ350539.1 Metagenome versatile chemolithoautotroph expanding oceanic dead zones Saanich Inlet 120 m depth clone SHBC798 prokMSA_id:534587 GU180177.1 Impact coplanar PCBs on microbial activity anaerobic estuarine sediments sediment and soil slurry clone Er-LAYS-105 prokMSA_id:535853 GQ351059.1 Metagenome versatile chemolithoautotroph expanding oceanic dead zones Saanich Inlet 200 m depth clone SHBH927 prokMSA_id:538777 GQ261280.1 Study on Sediment sediment Dongping Lake clone 1A4-9 prokMSA_id:541573 GQ356930.1 Metal Dependent Marine Methane Oxidation methane seep sediment clone Fe_B_113 prokMSA_id:552531 FJ628311.1 transition and zone within near-shore basin: brackish water anoxic fjord Nitinat Lake depth 13 clone Nit5Au0613_699 prokMSA_id:568756 FN396642.1 constant flux thermophilic cold seabed Arctic marine surface sediment clone s5_0_IV_12 prokMSA_id:581965 GQ850571.1 bottom water northern Bering Sea clone d111 prokMSA_id:585921 GQ357031.1 Metal Dependent Marine Methane Oxidation methane seep sediment clone FeOrig_B_123 prokMSA_id:589826 GQ347667.1 Metagenome versatile chemolithoautotroph expanding oceanic dead zones Saanich Inlet 215 m depth clone SGSH916 prokMSA_id:590201 FJ628325.1 transition and zone within near-shore basin: brackish water anoxic fjord Nitinat Lake depth 13 clone Nit5Au0613_723 prokMSA_id:593829 GQ246423.1 Temporal and spatial China North Yel Sea sediments clone Ld1-28 2.18.2.11 o__H39 11 seqs 2.18.2.11.1305 OTU 11 seqs prokMSA_id:23428 AF234690.1 sludge clone H39 prokMSA_id:36737 AF234734.1 sludge clone S41 prokMSA_id:82558 AY221060.1 Mammoth cave clone CCM2b prokMSA_id:114295 AY921802.1 farm soil clone AKYG684 prokMSA_id:144633 DQ297988.1 Microbial hydrocarbon contaminated soil clone UD6 prokMSA_id:207036 EF019253.1 aspen rhizosphere clone Elev_16S_434 prokMSA_id:242759 EU134119.1 tallgrass prarie soil clone FFCH14326 prokMSA_id:246089 EU134107.1 tallgrass prarie soil clone FFCH12863 prokMSA_id:250810 EU134003.1 tallgrass prarie soil clone FFCH610 prokMSA_id:557083 FJ479204.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p26f23ok prokMSA_id:559629 FJ484492.1 microbial autonomous rover world's deepest phreatic sinkhole wall biomat El Zacaton 17m depth clone Z17M90B 2.18.2.12 o__O4D2Z37 7 seqs 2.18.2.12.1306 OTU 7 seqs prokMSA_id:159196 DQ330025.1 Guerrero Negro hypersaline microbial mat clone 04D2Z37 prokMSA_id:159211 DQ330063.1 Guerrero Negro hypersaline microbial mat clone 062DZ89 prokMSA_id:235544 EU246194.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P5-A11 prokMSA_id:237424 EU245353.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H6-E05 prokMSA_id:253990 EU246217.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P5-D03 prokMSA_id:549616 EU488497.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_2C6_22 prokMSA_id:584240 GU056107.1 Biologic Techniques Applied Microbial Prospecting China: Ban 876 Gas Oil Field Being Used Example soil above gas and oil field clone DGS2-30 2.18.2.13 o__OPB11 200 seqs 2.18.2.13.1307 OTU 200 seqs prokMSA_id:2709 AF027031.1 hot spring clone OPB12 prokMSA_id:2712 AF027032.1 hot spring clone OPB11 prokMSA_id:62480 AF513960.1 Chloroflexi clone LAS-B16N prokMSA_id:70228 AF419665.1 Guaymas Basin hydrothermal sediment clone a2b046 prokMSA_id:101754 AY592669.1 deep-sea mud volcano clone Napoli-2B-47; BC07-2B-47 prokMSA_id:147679 AB248628.1 mesophilic anaerobic butyrate-degrading reactor clone BLB06 prokMSA_id:151554 DQ394929.1 harbor sediment clone VHS-B3-9 prokMSA_id:159052 DQ330160.1 Guerrero Negro hypersaline microbial mat clone 08D2Z33 prokMSA_id:159057 DQ330202.1 Guerrero Negro hypersaline microbial mat clone 10D2Z61 prokMSA_id:159068 DQ330200.1 Guerrero Negro hypersaline microbial mat clone 10D2Z94 prokMSA_id:159094 DQ330185.1 Guerrero Negro hypersaline microbial mat clone 09D2Z28 prokMSA_id:159100 DQ330173.1 Guerrero Negro hypersaline microbial mat clone 08D2Z18 prokMSA_id:159101 DQ330030.1 Guerrero Negro hypersaline microbial mat clone 05D2Z73 prokMSA_id:159119 DQ330183.1 Guerrero Negro hypersaline microbial mat clone 09D2Z69 prokMSA_id:159124 DQ330158.1 Guerrero Negro hypersaline microbial mat clone 072DZ38 prokMSA_id:159136 DQ330053.1 Guerrero Negro hypersaline microbial mat clone 062DZ10 prokMSA_id:159139 DQ330187.1 Guerrero Negro hypersaline microbial mat clone 09D2Z71 prokMSA_id:159157 DQ330168.1 Guerrero Negro hypersaline microbial mat clone 08D2Z21 prokMSA_id:159162 DQ330193.1 Guerrero Negro hypersaline microbial mat clone 10D2Z13 prokMSA_id:159176 DQ330201.1 Guerrero Negro hypersaline microbial mat clone 10D2Z49 prokMSA_id:159187 DQ330024.1 Guerrero Negro hypersaline microbial mat clone 04D2Z81 prokMSA_id:159192 DQ330135.1 Guerrero Negro hypersaline microbial mat clone 072DZ85 prokMSA_id:159200 DQ330139.1 Guerrero Negro hypersaline microbial mat clone 072DZ46 prokMSA_id:159219 DQ330137.1 Guerrero Negro hypersaline microbial mat clone 072DZ09 prokMSA_id:159232 DQ330172.1 Guerrero Negro hypersaline microbial mat clone 08D2Z12 prokMSA_id:159235 DQ330007.1 Guerrero Negro hypersaline microbial mat clone 02N1A227 prokMSA_id:159240 DQ330163.1 Guerrero Negro hypersaline microbial mat clone 08D2Z46 prokMSA_id:159253 DQ330149.1 Guerrero Negro hypersaline microbial mat clone 072DZ28 prokMSA_id:159261 DQ330186.1 Guerrero Negro hypersaline microbial mat clone 09D2Z67 prokMSA_id:159269 DQ330171.1 Guerrero Negro hypersaline microbial mat clone 08D2Z44 prokMSA_id:159294 DQ330138.1 Guerrero Negro hypersaline microbial mat clone 072DZ94 prokMSA_id:159298 DQ330047.1 Guerrero Negro hypersaline microbial mat clone 05D2Z53 prokMSA_id:159310 DQ330189.1 Guerrero Negro hypersaline microbial mat clone 10D2Z81 prokMSA_id:159317 DQ330146.1 Guerrero Negro hypersaline microbial mat clone 072DZ71 prokMSA_id:159319 DQ330166.1 Guerrero Negro hypersaline microbial mat clone 08D2Z72 prokMSA_id:159341 DQ330188.1 Guerrero Negro hypersaline microbial mat clone 09D2Z56 prokMSA_id:159348 DQ330170.1 Guerrero Negro hypersaline microbial mat clone 08D2Z69 prokMSA_id:159363 DQ330029.1 Guerrero Negro hypersaline microbial mat clone 05D2Z03 prokMSA_id:159373 DQ330176.1 Guerrero Negro hypersaline microbial mat clone 09D2Z10 prokMSA_id:159389 DQ330199.1 Guerrero Negro hypersaline microbial mat clone 10D2Z16 prokMSA_id:159395 DQ330198.1 Guerrero Negro hypersaline microbial mat clone 10D2Z17 prokMSA_id:159407 DQ330169.1 Guerrero Negro hypersaline microbial mat clone 08D2Z40 prokMSA_id:159460 DQ330004.1 Guerrero Negro hypersaline microbial mat clone 02N1A230 prokMSA_id:159479 DQ330147.1 Guerrero Negro hypersaline microbial mat clone 072DZ83 prokMSA_id:159504 DQ330191.1 Guerrero Negro hypersaline microbial mat clone 10D2Z08 prokMSA_id:159507 DQ330196.1 Guerrero Negro hypersaline microbial mat clone 10D2Z01 prokMSA_id:162071 DQ811879.1 mangrove soil clone MSB-5G10 prokMSA_id:162958 DQ811873.1 mangrove soil clone MSB-4F5 prokMSA_id:166485 DQ811870.1 mangrove soil clone MSB-3E10 prokMSA_id:209245 EF205559.1 among geographically regions central Tibet geothermal spring mat clone TP28 prokMSA_id:235361 EU245544.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M2-H06 prokMSA_id:235426 EU245537.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M2-G09 prokMSA_id:235444 EU245343.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H6-C11 prokMSA_id:235526 EU245493.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M2-C03 prokMSA_id:235633 EU245301.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H5-F05 prokMSA_id:235649 EU245125.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H2-E12 prokMSA_id:235843 EU246242.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P5-G01 prokMSA_id:235909 EU245167.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H3-D10 prokMSA_id:236022 EU245690.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M4-G12 prokMSA_id:236100 EU245548.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M2-H10 prokMSA_id:236178 EU245781.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M6-C04 prokMSA_id:236223 EU245565.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-B04 prokMSA_id:236253 EU245747.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M5-G11 prokMSA_id:236639 EU245530.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M2-G02 prokMSA_id:236682 EU245105.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H2-B06 prokMSA_id:236713 EU245847.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-B08 prokMSA_id:236765 EU245890.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-G04 prokMSA_id:236787 EU245306.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H5-G01 prokMSA_id:237150 EU245892.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-G07 prokMSA_id:237261 EU245228.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H4-D07 prokMSA_id:237372 EU245126.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H2-F01 prokMSA_id:237669 EU245328.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H6-A09 prokMSA_id:237771 EU245605.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-F02 prokMSA_id:238351 EU245710.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M5-B08 prokMSA_id:238367 EU245969.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M8-G12 prokMSA_id:238405 EU245626.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-H03 prokMSA_id:238497 EU245451.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M1-G04 prokMSA_id:238582 EU245058.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H1-C02 prokMSA_id:238804 EU246281.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P6-C04 prokMSA_id:238861 EU245752.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M5-H04 prokMSA_id:239123 EU245751.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M5-H03 prokMSA_id:239253 EU245857.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-C10 prokMSA_id:239373 EU245948.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M8-E10 prokMSA_id:239553 EU245212.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H4-B10 prokMSA_id:239723 EU245830.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-A01 prokMSA_id:239784 EU245630.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-H07 prokMSA_id:239971 EU245735.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M5-F02 prokMSA_id:240146 EU246260.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P5-H12 prokMSA_id:240270 EU246248.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P5-G08 prokMSA_id:240350 EU245807.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M6-F08 prokMSA_id:240523 EU245870.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-E01 prokMSA_id:240745 EU245354.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H6-E06 prokMSA_id:240853 EU245703.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M5-A09 prokMSA_id:240911 EU245398.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M1-B10 prokMSA_id:240978 EU245923.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M8-C03 prokMSA_id:240981 EU245759.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M5-H11 prokMSA_id:241036 EU245596.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-E04 prokMSA_id:241254 EU245841.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-B01 prokMSA_id:241434 EU245746.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M5-G10 prokMSA_id:241648 EU245772.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M6-B04 prokMSA_id:241680 EU245900.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-H04 prokMSA_id:241775 EU245446.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M1-F11 prokMSA_id:241917 EU245302.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H5-F06 prokMSA_id:242079 EU245918.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M8-B08 prokMSA_id:242399 EU245723.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M5-D06 prokMSA_id:242517 EU245589.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-D07 prokMSA_id:242894 EU245818.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M6-G10 prokMSA_id:243034 EU246266.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P6-A10 prokMSA_id:243347 EU245610.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-F09 prokMSA_id:243407 EU245483.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M2-B04 prokMSA_id:243415 EU246094.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P3-C04 prokMSA_id:243593 EU245878.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-E10 prokMSA_id:243597 EU245957.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M8-F11 prokMSA_id:243838 EU245641.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M4-A06 prokMSA_id:243856 EU245217.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H4-C06 prokMSA_id:243926 EU245146.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H3-A04 prokMSA_id:244121 EU246282.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P6-C05 prokMSA_id:244163 EU245797.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M6-E05 prokMSA_id:244672 EU245851.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-C02 prokMSA_id:244977 EU245289.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H5-D08 prokMSA_id:245057 EU245926.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M8-C09 prokMSA_id:245292 EU245913.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M8-A11 prokMSA_id:245439 EU245660.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M4-C10 prokMSA_id:245606 EU246050.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P2-D07 prokMSA_id:245943 EU245675.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M4-E11 prokMSA_id:245957 EU245699.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M4-H12 prokMSA_id:245989 EU245978.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M8-H11 prokMSA_id:246351 EU245711.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M5-B09 prokMSA_id:246364 EU245090.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H1-H02 prokMSA_id:246720 EU245511.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M2-E03 prokMSA_id:246884 EU246314.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P6-G06 prokMSA_id:247047 EU245741.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M5-F10 prokMSA_id:247101 EU245852.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-C03 prokMSA_id:247443 EU245795.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M6-E03 prokMSA_id:247453 EU245822.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M6-H04 prokMSA_id:247578 EU245838.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-A10 prokMSA_id:247579 EU245560.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-A10 prokMSA_id:247674 EU245826.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M6-H09 prokMSA_id:248011 EU245139.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H2-H02 prokMSA_id:248188 EU245194.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H3-H08 prokMSA_id:248276 EU245423.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M1-D12 prokMSA_id:248343 EU246245.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P5-G04 prokMSA_id:248605 EU245730.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M5-E07 prokMSA_id:249086 EU245115.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H2-D06 prokMSA_id:249984 EU245538.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M2-G11 prokMSA_id:250437 EU245204.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H4-B01 prokMSA_id:250480 EU245425.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M1-E02 prokMSA_id:250790 EU245647.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M4-B02 prokMSA_id:250919 EU245758.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M5-H10 prokMSA_id:250928 EU245670.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M4-D12 prokMSA_id:251163 EU245430.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M1-E07 prokMSA_id:251437 EU245792.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M6-D11 prokMSA_id:251629 EU246063.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P2-F04 prokMSA_id:251631 EU245053.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H1-B02 prokMSA_id:251689 EU245850.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-C01 prokMSA_id:251838 EU245622.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-G11 prokMSA_id:251937 EU245552.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-A02 prokMSA_id:252001 EU245567.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-B06 prokMSA_id:252112 EU245911.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M8-A09 prokMSA_id:252162 EU245598.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-E06 prokMSA_id:252301 EU246141.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P4-B11 prokMSA_id:252524 EU245592.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-D11 prokMSA_id:252732 EU245420.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M1-D09 prokMSA_id:252777 EU246271.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P6-B03 prokMSA_id:252879 EU245485.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M2-B06 prokMSA_id:252980 EU245546.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M2-H08 prokMSA_id:253416 EU245428.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M1-E05 prokMSA_id:253747 EU245770.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M6-B02 prokMSA_id:254038 EU245510.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M2-E02 prokMSA_id:254487 EU245646.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M4-A12 prokMSA_id:255588 EU245583.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M3-C12 prokMSA_id:255693 EU245549.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M2-H11 prokMSA_id:255778 EU245513.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M2-E05 prokMSA_id:255787 EU245377.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H6-H07 prokMSA_id:255812 EU245392.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M1-B01 prokMSA_id:256129 EU245784.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M6-C09 prokMSA_id:256409 EU245863.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-D05 prokMSA_id:256718 EU245462.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M1-H05 prokMSA_id:256734 EU245881.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M7-F02 prokMSA_id:256782 EU245744.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M5-G08 prokMSA_id:257292 EU245531.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-M2-G03 prokMSA_id:257592 EU246044.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P2-C02 prokMSA_id:269199 AM943571.1 Microbial dolomite formation Lagoa Vermelha Brazil carbonaceous sediments hypersaline lagoon clone LV-Bac12 prokMSA_id:333224 FJ264758.1 Manganese and Iron Dependent Anaerobic Oxidation Methane methane seep sediment clone livecontrolB24 prokMSA_id:334183 FJ264560.1 Manganese and Iron Dependent Anaerobic Oxidation Methane methane seep sediment clone Mn3b-B163 prokMSA_id:424925 GQ143781.1 Level Continental Shelf Sediment and Phylum-level lineages Phylum Planctomycetes Yel Sea continental shelf sediment clone JJB234 prokMSA_id:443913 GQ143765.1 Level Continental Shelf Sediment and Phylum-level lineages Phylum Planctomycetes Yel Sea continental shelf sediment clone JJB201 prokMSA_id:508876 GQ249567.1 Microbial anaerobic sediments Bay Cadiz (Spain) marine sediment: 12-14 cm layer clone D25 prokMSA_id:512964 FJ638585.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCLunmb_14_30 prokMSA_id:536506 GQ848217.1 and Archaeal Xiarinur Soda Lake Water-sediment Interface water-sediment interface clone x126 prokMSA_id:539560 EU488453.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_2C5_22 prokMSA_id:543473 EU488090.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_1C4_61 prokMSA_id:548208 EU488214.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_2C3_76 prokMSA_id:550014 GQ249578.1 Microbial anaerobic sediments Bay Cadiz (Spain) marine sediment: 12-14 cm layer clone D36 prokMSA_id:554465 EU488179.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_2C3_41 prokMSA_id:560750 FN563361.1 Impact changing HRT OLR on prokaryotes involved biomethanizitaion and fuzzy logic controlled 2 phase reactor mesophilic biogas digester; beet silage served clone HAW-RM37-2-B-1755d-Repeat prokMSA_id:561017 FJ821655.1 hot spring sediment clone R1 prokMSA_id:571797 GQ249546.1 Microbial anaerobic sediments Bay Cadiz (Spain) marine sediment: 12-14 cm layer clone D04 prokMSA_id:571883 GQ850583.1 bottom water northern Bering Sea clone d147 prokMSA_id:573706 EU488065.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_1C4_38 2.18.2.14 o__S0208 34 seqs 2.18.2.14.1308 OTU 34 seqs prokMSA_id:80115 AY193182.1 thermal spring mat clone O1aA2 prokMSA_id:102457 AY592385.1 deep-sea mud volcano clone Amsterdam-2B-25; BC20-2B-25 prokMSA_id:161161 AB250571.1 and ecology Grotta Azzurra Palinuro Cape (Salerno Italy) microbial mat clone #4-3 prokMSA_id:164467 DQ811866.1 mangrove soil clone MSB-3H11 prokMSA_id:173719 DQ463699.2 distinct Lake Tanganyika anoxic hypolimnion clone TK-SH16a prokMSA_id:184557 EF061968.1 Xiamen China mangrove sediment clone XME13 prokMSA_id:211551 EF205579.1 among geographically regions central Tibet geothermal spring mat clone TP7 prokMSA_id:228873 EF594058.1 mixed granule anammox reactor clone KIST-JJY026 prokMSA_id:233441 EF594052.1 mixed granule anammox reactor clone KIST-JJY020 prokMSA_id:237462 EU133960.1 tallgrass prarie soil clone FFCH4823 prokMSA_id:238297 EU134146.1 tallgrass prarie soil clone FFCH9060 prokMSA_id:241530 EU134007.1 tallgrass prarie soil clone FFCH5447 prokMSA_id:242441 EU134016.1 tallgrass prarie soil clone FFCH4997 prokMSA_id:243734 EU245187.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H3-G06 prokMSA_id:248966 EU245378.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H6-H09 prokMSA_id:249286 EU133999.1 tallgrass prarie soil clone FFCH6322 prokMSA_id:260014 EU037300.2 structure landfill sediments receiving long-term augmentations wastes chromium contaminated soil clone G1DCM-289 prokMSA_id:272558 EU374068.1 southern Cretan margin (eastern Mediterranean Sea) canyon and slope sediment clone HCM3MC91_6G_FL prokMSA_id:274220 EU491083.1 Abundance and microbial life ocean crust seafloor lavas Loi'hi Seamount South Rift X3 clone P7X3b1B07 prokMSA_id:304270 EU669650.1 soil clone S8-80 prokMSA_id:312328 EU979011.1 Effects intercropping Rhizobium inoculation on microbial biomass and rhizosphere bean (Vicia faba L.) soil clone g2 prokMSA_id:322996 FM242278.1 sequences sediment clone 17bis T0h-oil prokMSA_id:509710 FJ479284.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p36g05ok prokMSA_id:533015 FJ710669.1 Abundance and microbial long-term operated anammox biofilm reactors initiated inocula oxygen-limited autotrophic nitrification-denitrification reactor clone Ge19 prokMSA_id:533639 EU488293.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_2C4_4 prokMSA_id:550672 EU488398.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_2C4_109 prokMSA_id:559886 FJ665216.1 Study Prokarytic Selected Niches Western Ghats India ground swab mangrove forest clone BCSAS2P1G2 prokMSA_id:561649 FJ710719.1 Abundance and microbial long-term operated anammox biofilm reactors initiated inocula oxygen-limited autotrophic nitrification-denitrification reactor clone Ge69 prokMSA_id:574527 FJ478819.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p27g06ok prokMSA_id:584776 FJ479594.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p7f08ok prokMSA_id:587238 FJ478544.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p27l20ok prokMSA_id:589667 FJ710715.1 Abundance and microbial long-term operated anammox biofilm reactors initiated inocula oxygen-limited autotrophic nitrification-denitrification reactor clone Ge65 prokMSA_id:590274 FJ479573.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p11m18ok prokMSA_id:594219 FJ710693.1 Abundance and microbial long-term operated anammox biofilm reactors initiated inocula oxygen-limited autotrophic nitrification-denitrification reactor clone Ge43 2.18.2.15 o__SB-34 31 seqs 2.18.2.15.1309 OTU 31 seqs prokMSA_id:1298 AB015556.1 deep-sea sediment clone BD3-16 prokMSA_id:101396 AY592366.1 deep-sea mud volcano clone Amsterdam-2B-06; BC20-2B-06 prokMSA_id:104357 AY592651.1 deep-sea mud volcano clone Napoli-2B-27; BC07-2B-27 prokMSA_id:106852 AY592391.1 deep-sea mud volcano clone Amsterdam-2B-31; BC20-2B-31 prokMSA_id:111450 AY869683.1 ridge flank crustal fluids clone FS117-41B-02 prokMSA_id:171074 DQ811877.1 mangrove soil clone MSB-5B1 prokMSA_id:200238 EF208653.1 Vertical and horizontal structure microbial sandy carbonate sediment clone CI35cm.2.05a prokMSA_id:239149 EU048611.1 Microbial surface marine sediment Xisha Trough South China Sea clone MD2902-B4 prokMSA_id:268805 EU385894.1 Stratified microbes sediments Core MD05-2902 subseafloor sediment South China Sea clone MD2902-B80 prokMSA_id:298691 AM745142.1 Impact oil er hydrocarbons on microbial and activity Gulf Mexico cold seep marine sediments clone GoM161_Bac3 prokMSA_id:509084 FJ746327.1 Microbial oligotrophic marine sediments: South Pacific Gyre ocean sediment 5306 m water depth during Cruise Knox02rr clone SPG12_461_471_B32 prokMSA_id:509572 FJ746247.1 Microbial oligotrophic marine sediments: South Pacific Gyre ocean sediment 5306 m water depth during Cruise Knox02rr clone SPG12_461_471_B11 prokMSA_id:509741 FJ712555.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-25-B1 prokMSA_id:510939 FJ205347.1 Prokaryotic deep-sea hydrothermal region East Lau Spreading Centre deep marine sediments depth:2725m clone I1G prokMSA_id:512444 FJ746130.1 Microbial oligotrophic marine sediments: South Pacific Gyre ocean sediment 5306 m water depth during Cruise Knox02rr clone SPG12_343_353_B44 prokMSA_id:513961 FJ455877.1 Variations archaeal and sulfate-methane transition zone continental margin sediments (Santa Barbara Basin California) marine sediment clone B103A08 prokMSA_id:521924 FJ712544.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-10-B76 prokMSA_id:534904 AM997362.1 and biogeography deep-sea surface sediments South Ocean Atlantic Ocean:South-Atlantic OceanAngola Basin clone Ucm15262 prokMSA_id:536403 FJ484539.1 microbial autonomous rover world's deepest phreatic sinkhole wall biomat El Zacaton 53m depth clone Z53M66B prokMSA_id:538643 FJ545469.1 Diveristy Seawater and Sediment Northern North Yel Sea sediment clone S1-39 prokMSA_id:544292 AM997406.1 and biogeography deep-sea surface sediments South Ocean Atlantic Ocean:South-Atlantic OceanAngola Basin clone Ucn1526 prokMSA_id:548187 GU056110.1 Biologic Techniques Applied Microbial Prospecting China: Ban 876 Gas Oil Field Being Used Example soil above gas and oil field clone DGS2-34 prokMSA_id:553605 AM997382.1 and biogeography deep-sea surface sediments South Ocean Atlantic Ocean:South-Atlantic OceanAngola Basin clone Ucm15293 prokMSA_id:553966 FJ746244.1 Microbial oligotrophic marine sediments: South Pacific Gyre ocean sediment 5306 m water depth during Cruise Knox02rr clone SPG12_213_223_B80 prokMSA_id:560466 AM997288.1 and biogeography deep-sea surface sediments South Ocean Atlantic Ocean:South-Atlantic OceanAngola Basin clone Ucm1529 prokMSA_id:563346 FJ746311.1 Microbial oligotrophic marine sediments: South Pacific Gyre ocean sediment 5306 m water depth during Cruise Knox02rr clone SPG12_60_70_B61 prokMSA_id:564597 FJ873269.1 Vertical and archaea methane-rich cold seep located base sediments Okhotsk Sea clone bOHTK-23 prokMSA_id:566064 FN396761.1 constant flux thermophilic cold seabed Arctic marine surface sediment clone s5_8_II_8 prokMSA_id:570248 AM490737.1 Linking and functional nutrient spiraling mats (USA) microbial mat sulfidic cave spring Lower Kane Cave Big Horn LKC22 clone SS_LKC22_UA92 prokMSA_id:572520 FJ746236.1 Microbial oligotrophic marine sediments: South Pacific Gyre ocean sediment 5306 m water depth during Cruise Knox02rr clone SPG12_213_223_B88 prokMSA_id:575684 GU363047.1 and archaeal biogeochemical cycling genes within Qiongdongnan basin Sea: pilot study microbial shifting marine sediment South China Sea clone BD72BR130 2.18.2.16 o__SHA-20 15 seqs 2.18.2.16.1310 OTU 15 seqs prokMSA_id:103642 AY592333.1 deep-sea mud volcano clone Amsterdam-1B-29; BC20-1B-29 prokMSA_id:104347 AY592350.1 deep-sea mud volcano clone Amsterdam-1B-49; BC20-1B-49 prokMSA_id:151229 DQ394932.1 harbor sediment clone VHS-B3-15 prokMSA_id:151314 DQ394964.1 harbor sediment clone VHS-B3-80 prokMSA_id:161058 AM176852.1 Recovery mangrove sediment clone SZB52 prokMSA_id:164448 DQ811887.1 mangrove soil clone MSB-5H11 prokMSA_id:170827 DQ463738.2 distinct Lake Tanganyika anoxic hypolimnion clone TK-SH18 prokMSA_id:170927 DQ811874.1 mangrove soil clone MSB-4H2 prokMSA_id:192578 EF061971.1 Xiamen China mangrove sediment clone XME55 prokMSA_id:199390 EF061967.1 Xiamen China mangrove sediment clone XME3 prokMSA_id:202905 EF208698.1 Vertical and horizontal structure microbial sandy carbonate sediment clone CI75cm.2.02 prokMSA_id:518280 FJ712527.1 Prokaryotic structure and sediments active submarine mud volcano (Kazan MV Sea) Kazan Mud Volcano Anaximander Mountains East Mediterranean Sea clone KZNMV-10-B47 prokMSA_id:558101 EU488019.1 lucinid bivalve- symbiotic system: significance geochemical habitat on symbiont and siliciclastic sedment Thalassia sea grass bed clone CK_1C3_41 prokMSA_id:562944 FJ665218.1 Study Prokarytic Selected Niches Western Ghats India ground swab mangrove forest clone BCSAS2P1G5 prokMSA_id:573957 GU363044.1 and archaeal biogeochemical cycling genes within Qiongdongnan basin Sea: pilot study microbial shifting marine sediment South China Sea clone BD72BR122 2.18.2.17 o__SJA-101 39 seqs 2.18.2.17.1 f__H5 5 seqs 2.18.2.17.1.1311 OTU 5 seqs prokMSA_id:159224 DQ330037.1 Guerrero Negro hypersaline microbial mat clone 05D2Z61 prokMSA_id:159256 DQ330038.1 Guerrero Negro hypersaline microbial mat clone 05D2Z82 prokMSA_id:159501 DQ330055.1 Guerrero Negro hypersaline microbial mat clone 062DZ74 prokMSA_id:235632 EU245259.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H4-H07 prokMSA_id:252689 EU245271.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H5-B02 2.18.2.17.2 f__SHA-31 34 seqs 2.18.2.17.2.1312 OTU 34 seqs prokMSA_id:88752 AY297975.1 thermophilic anaerobic terephthalate-degrading sludge clone TTA_B60 prokMSA_id:110261 AY862521.1 rice slurry clone TPD-4 prokMSA_id:113071 AY922014.1 farm soil clone AKYG439 prokMSA_id:113771 AY921707.1 farm soil clone AKYG1138 prokMSA_id:114053 AY921708.1 farm soil clone AKYG1910 prokMSA_id:114394 AY921709.1 farm soil clone AKYG643 prokMSA_id:159059 DQ330179.1 Guerrero Negro hypersaline microbial mat clone 09D2Z14 prokMSA_id:159103 DQ330058.1 Guerrero Negro hypersaline microbial mat clone 062DZ51 prokMSA_id:159152 DQ330182.1 Guerrero Negro hypersaline microbial mat clone 09D2Z08 prokMSA_id:159154 DQ330009.1 Guerrero Negro hypersaline microbial mat clone 02N1A254 prokMSA_id:159155 DQ330142.1 Guerrero Negro hypersaline microbial mat clone 072DZ33 prokMSA_id:159201 DQ330140.1 Guerrero Negro hypersaline microbial mat clone 072DZ26 prokMSA_id:159233 DQ330008.1 Guerrero Negro hypersaline microbial mat clone 02N1A246 prokMSA_id:159239 DQ330141.1 Guerrero Negro hypersaline microbial mat clone 072DZ16 prokMSA_id:159346 DQ330143.1 Guerrero Negro hypersaline microbial mat clone 072DZ41 prokMSA_id:159426 DQ330180.1 Guerrero Negro hypersaline microbial mat clone 09D2Z85 prokMSA_id:159442 DQ330059.1 Guerrero Negro hypersaline microbial mat clone 062DZ65 prokMSA_id:159476 DQ330165.1 Guerrero Negro hypersaline microbial mat clone 08D2Z71 prokMSA_id:248616 EU245227.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H4-D06 prokMSA_id:258151 EU245338.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H6-C02 prokMSA_id:513410 FJ675511.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk west pen 301; was negative STEC O157 clone LL141-8H6 prokMSA_id:516109 FJ671130.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-5D13 prokMSA_id:516562 FJ675529.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk west pen 301; was negative STEC O157 clone LL141-8I5 prokMSA_id:523452 FJ674977.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk west pen 301; was negative STEC O157 clone LL141-6C7 prokMSA_id:527889 FJ670866.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm next water pen 301; was negative STEC O157 clone LL143-2O7 prokMSA_id:529165 FJ675477.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk west pen 301; was negative STEC O157 clone LL141-8F5 prokMSA_id:530277 FJ672886.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk east pen 301; was negative STEC O157 clone Ll142-7M2 prokMSA_id:530421 FJ674710.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk west pen 301; was negative STEC O157 clone LL141-2O4 prokMSA_id:530728 FJ675169.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk west pen 301; was negative STEC O157 clone LL141-6P12 prokMSA_id:531923 FJ672198.1 Synecology primary and secondary habitats Escherichia coli O157:H7 feedlot surface material MARC beef cattle feedlot; top 3 cm behind feedbunk east pen 301; was negative STEC O157 clone Ll142-3G1 prokMSA_id:542524 FN436203.1 Molekularbiologische Charakterisierung der bakteriellen Populationsdynamik eines thermophil betriebenen Biogasfermenters zur Vergaerung nachwachsender Rohstoffe thermophilic biogas reactor fed renewable biomass clone HAW-R60-B-1249d-AM prokMSA_id:551191 FJ821660.1 hot spring sediment clone R24 prokMSA_id:551775 FN436181.1 Molekularbiologische Charakterisierung der bakteriellen Populationsdynamik eines thermophil betriebenen Biogasfermenters zur Vergaerung nachwachsender Rohstoffe thermophilic biogas reactor fed renewable biomass clone HAW-R60-B-1249d-O prokMSA_id:568011 FN436145.1 Molekularbiologische Charakterisierung der bakteriellen Populationsdynamik eines thermophil betriebenen Biogasfermenters zur Vergaerung nachwachsender Rohstoffe thermophilic biogas reactor fed renewable biomass clone HAW-R60-B-924d-AA 2.18.2.18 o__SJA-15 15 seqs 2.18.2.18.1313 OTU 15 seqs prokMSA_id:52017 AJ249106.1 DCP-dechlorinating consortium clone SHA-3 prokMSA_id:65481 AJ278167.1 anaerobic bioreactor clone SHD-71 prokMSA_id:66912 AJ306792.1 DCP-dechlorinating consortium clone SHD-12 prokMSA_id:146618 AM086103.1 Abundance and archaea mesotrophic Lake Kinneret lake profundal sediment clone c5LKS2 prokMSA_id:162849 DQ463698.2 distinct Lake Tanganyika anoxic hypolimnion clone TK-SH17 prokMSA_id:171902 DQ833494.1 detected analyses depth sediment Guanting Reservoir clone 35-62 prokMSA_id:210067 EF464632.1 Identification sulfate reducing methylmercury contaminated SSU genes gold mine tailings clone ELC_30_7_bac prokMSA_id:235963 EF632948.1 Unique microbial contrasting aquatic altitude Andean Altiplano (northern Chile) freshwater sediment clone Pia-s-77 prokMSA_id:262429 EU542538.1 Effects chemical structure concentration on pathways microbial during dechlorination coplanar PCBs slurries sediment and soil slurry clone Er-LLAYS-100 prokMSA_id:263961 AB426235.1 -situ identification study benzene-degrading s under methanogenic condition anaerobic benzene degrading enrichment which was d lotus field soil clone mbI-b53 prokMSA_id:576982 FN563354.1 Impact changing HRT OLR on prokaryotes involved biomethanizitaion and fuzzy logic controlled 2 phase reactor mesophilic biogas digester; beet silage served clone HAW-RM37-2-M-1755d-E prokMSA_id:579374 FN563360.1 Impact changing HRT OLR on prokaryotes involved biomethanizitaion and fuzzy logic controlled 2 phase reactor mesophilic biogas digester; beet silage served clone HAW-RM37-2-M-1755d-A18 prokMSA_id:580912 FN563196.1 Impact changing HRT OLR on prokaryotes involved biomethanizitaion and fuzzy logic controlled 2 phase reactor mesophilic biogas digester; beet silage served clone HAW-RM37-2-B-877d-P prokMSA_id:582127 FN563245.1 Impact changing HRT OLR on prokaryotes involved biomethanizitaion and fuzzy logic controlled 2 phase reactor mesophilic biogas digester; beet silage served clone HAW-RM37-2-B-1017d-H prokMSA_id:594048 FN563397.1 Impact changing HRT OLR on prokaryotes involved biomethanizitaion and fuzzy logic controlled 2 phase reactor mesophilic biogas digester; beet silage served clone HAW-RM37-2-B-1755d-Repeat-A11 2.18.2.19 o__WCHB1-50 26 seqs 2.18.2.19.1314 OTU 26 seqs prokMSA_id:2751 AJ009460.1 chlorobenzene-degrading consortium clone SJA-35 prokMSA_id:25243 AF445692.1 travertine hot spring clone SM1F10 prokMSA_id:65692 AF507691.1 forest soil clone S041 prokMSA_id:132404 DQ067036.1 Lake Washington sediment clone pLW-97 prokMSA_id:136124 AY326634.1 Amazon soil clone 1067-1 prokMSA_id:143216 AB240244.1 microbial structure rhizosphere Phragmites bulk soil reed bed reactor laboratory clone BS063 prokMSA_id:143557 AB240366.1 microbial structure Phragmites rhizosphere biofilm reed bed reactor laboratory clone RB390 prokMSA_id:152295 DQ413121.1 Microbial -dependent and Approaches Anaerobic/Aerobic SBR Reactor EBPR sludge clone 62 prokMSA_id:200535 AY555774.1 abundance and archaea Thailand Bor Khlueng hot spring clone PK6 prokMSA_id:200908 AY193181.1 New perspective on division OP11 thermal spring mat clone O1aA21 prokMSA_id:203363 AY193183.1 New perspective on division OP11 thermal spring mat clone O1aA19 prokMSA_id:203941 AB286459.1 Reducing production and domination comamonadaceae reducing oxygen supply wastewater treatment procedure food-processing factory activated sludge clone 0741 prokMSA_id:210619 AB286640.1 Reducing production and domination comamonadaceae reducing oxygen supply wastewater treatment procedure food-processing factory activated sludge clone 1641 prokMSA_id:211661 AB286334.1 Reducing production and domination comamonadaceae reducing oxygen supply wastewater treatment procedure food-processing factory activated sludge clone 0104 prokMSA_id:213540 EF205535.1 among geographically regions central Tibet geothermal spring mat clone DTB24 prokMSA_id:214305 AB286594.1 Reducing production and domination comamonadaceae reducing oxygen supply wastewater treatment procedure food-processing factory activated sludge clone 1536 prokMSA_id:216153 EF205562.1 among geographically regions central Tibet geothermal spring mat clone TP10 prokMSA_id:232744 EF520628.1 structure lakes: what controls ? acid-impacted lake clone ADK-IHh02-60 prokMSA_id:241276 EU134049.1 tallgrass prarie soil clone FFCH10915 prokMSA_id:311252 EU669628.1 soil clone S22-83 prokMSA_id:542855 GQ396824.1 Functional unvegetated perhumid recently-deglaciated soils do not correlate shifts soil clone AK1AB1_05H prokMSA_id:553227 FJ484890.1 microbial autonomous rover world's deepest phreatic sinkhole wall biomat El Zacaton 4m depth clone Z4MB91 prokMSA_id:572435 FJ592893.1 Fumarole-supported islands biodiversity within hyperarid -elevation landscape on Puna de Atacama cold-fumarole soil (elev. 5824 m) Socompa Volcano Andes clone B09_SB1A prokMSA_id:583024 AB487085.1 Microbial populations responsive denitrification-inducing conditions rice paddy soil clone TSNIR001_H10 prokMSA_id:587145 GQ487895.1 Microbial metal soil polluted heavy metals clone T1-45 prokMSA_id:594201 AB487122.1 Microbial populations responsive denitrification-inducing conditions rice paddy soil clone TSNIR001_K14 2.18.2.2 o__A31 12 seqs 2.18.2.2.1 f__KNA6-EB22 3 seqs 2.18.2.2.1.1284 OTU 3 seqs prokMSA_id:102361 AB179693.1 groundwater 0.2 m-captured fraction clone KNA6-EB22 prokMSA_id:531244 FJ793157.1 Archaea and Hot Spring Thailand Tao Dam hot spring clone TDB12 prokMSA_id:533163 FJ484546.1 microbial autonomous rover world's deepest phreatic sinkhole wall biomat El Zacaton 53m depth clone Z53M75B 2.18.2.2.2 f__S47 9 seqs 2.18.2.2.2.1285 OTU 9 seqs prokMSA_id:44024 AF234694.1 sludge clone A31 prokMSA_id:52208 AF234723.1 sludge clone S47 prokMSA_id:65688 AF507695.1 forest soil clone S0126 prokMSA_id:215669 EF018570.1 aspen rhizosphere clone Amb_16S_837 prokMSA_id:239489 EU134095.1 tallgrass prarie soil clone FFCH1188 prokMSA_id:244349 EU134015.1 tallgrass prarie soil clone FFCH5128 prokMSA_id:245929 EU134022.1 tallgrass prarie soil clone FFCH3342 prokMSA_id:566274 FJ479342.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p7c22ok prokMSA_id:586223 FJ479600.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p32f10ok 2.18.2.3 o__A4b 113 seqs 2.18.2.3.1286 OTU 113 seqs prokMSA_id:1286 AF173820.1 Antarctic lake ice clone LB3-17 prokMSA_id:2727 AF173817.1 Antarctic lake ice clone LB3-100 prokMSA_id:30131 AF445676.1 travertine hot spring clone SM1D10 prokMSA_id:44185 AF234718.1 sludge clone S9 prokMSA_id:47497 AF445738.1 travertine hot spring clone SM2G06 prokMSA_id:53925 AF234733.1 sludge clone S14 prokMSA_id:60170 AJ347042.1 sponge clone TK32 prokMSA_id:60174 AJ347035.1 sponge clone TK16 prokMSA_id:60582 AF407718.1 Great Artesian Basin clone B25 prokMSA_id:65453 AY102332.1 heavy metal-contaminated soil clone a13139 prokMSA_id:71617 X84576.2 mixed genomic activated sludge clone SBR2037 prokMSA_id:72480 AJ347043.1 sponge clone TK35 prokMSA_id:103839 AB117714.1 autotrophic nitrifying biofilm clone NB-10 prokMSA_id:112821 AY922031.1 farm soil clone AKYG549 prokMSA_id:113017 AY922012.1 farm soil clone AKYG434 prokMSA_id:113210 AY921747.1 farm soil clone AKYH948 prokMSA_id:113259 AY921746.1 farm soil clone AKYH905 prokMSA_id:114049 AY921898.1 farm soil clone AKYG1753 prokMSA_id:114246 AY921926.1 farm soil clone AKYH973 prokMSA_id:131339 DQ017911.1 upland stream clone S-Rwb_62 prokMSA_id:154220 DQ404819.1 contaminated sediment clone 655947 prokMSA_id:185950 DQ521481.1 Antarctic lake ice cover clone ANTLV1_C12 prokMSA_id:200324 AY491572.1 Electrochemically active oligotrophic microbial fuel cell enriched artificial wastewater clone oc28 prokMSA_id:207768 EF205466.1 among geographically regions central Tibet geothermal spring mat clone YCB50 prokMSA_id:214083 EF019578.1 aspen rhizosphere clone Elev_16S_1094 prokMSA_id:214902 EF019583.1 aspen rhizosphere clone Elev_16S_1102 prokMSA_id:215379 EF019589.1 aspen rhizosphere clone Elev_16S_1110 prokMSA_id:219899 EF516958.1 grassland soil clone FCPS653 prokMSA_id:223701 EF516563.1 grassland soil clone FCPT422 prokMSA_id:238542 EU134048.1 tallgrass prarie soil clone FFCH11279 prokMSA_id:239817 EU133970.1 tallgrass prarie soil clone FFCH15060 prokMSA_id:240136 AM259916.1 Chondrilla nucula-specific sponge mesohyl clone CN69 prokMSA_id:242416 EU133962.1 tallgrass prarie soil clone FFCH4748 prokMSA_id:243950 EU134165.1 tallgrass prarie soil clone FFCH1946 prokMSA_id:248283 EU134161.1 tallgrass prarie soil clone FFCH18628 prokMSA_id:248412 EU134013.1 tallgrass prarie soil clone FFCH5168 prokMSA_id:249472 EU051342.1 soil clone BJ-204 prokMSA_id:249503 EU134153.1 tallgrass prarie soil clone FFCH17716 prokMSA_id:250122 EU037204.1 Hot Spring Microbial Mat Khir Ganga India hot spring microbial mat clone MO67 prokMSA_id:251267 EU134041.1 tallgrass prarie soil clone FFCH12632 prokMSA_id:251306 EU134114.1 tallgrass prarie soil clone FFCH13762 prokMSA_id:251353 EU133974.1 tallgrass prarie soil clone FFCH9554 prokMSA_id:251433 EU037219.1 Hot Spring Microbial Mat Khir Ganga India hot spring microbial mat clone MO17 prokMSA_id:256687 EF076096.1 Sponge- microorganisms: evolution ecology and biotechnological potential Bahamas: Little San Salvador Island clone PK044 prokMSA_id:257781 EU134033.1 tallgrass prarie soil clone FFCH14215 prokMSA_id:270948 EF126266.1 Phototrophic microbial build laminated Fe-formations on Sulawesi Indonesia mesophilic terrestrial mat clone MMA40 prokMSA_id:306793 FJ152730.1 Changes populations drained extreme soil (Mexico) alkaline saline soils former lake Texcoco clone TX5A_22 prokMSA_id:308698 FM253644.1 Rock gold mine unusually microbial biofilm clone C04-2 prokMSA_id:310277 FJ152787.1 Changes populations drained extreme soil (Mexico) alkaline saline soils former lake Texcoco clone TX5A_79 prokMSA_id:316115 FM253645.1 Rock gold mine unusually microbial biofilm clone C05-2 prokMSA_id:324279 CU466712.1 Evry wastewater treatment plant anoxic basin clone prokMSA_id:330071 FM253616.1 Rock gold mine unusually microbial biofilm clone F10-1 prokMSA_id:330804 EU104216.1 Evidence Comamonadaceae determinants settling performance activated sludge clone N1512_47 prokMSA_id:336578 FM253679.1 Rock gold mine unusually microbial biofilm clone H06-2 prokMSA_id:339692 FM253579.1 Rock gold mine unusually microbial biofilm clone B06-1 prokMSA_id:361865 EU332818.1 FACS assist identification TFO present aerobic enhanced biological phosphorus removal sequencing batch reactor clone OTUI177 prokMSA_id:509673 FJ481274.1 Microbes marine sponges sponge tissue clone XB1B09F prokMSA_id:510478 FJ481238.1 Microbes marine sponges sponge tissue clone XA2E01F prokMSA_id:510618 FJ481273.1 Microbes marine sponges sponge tissue clone XB1B08F prokMSA_id:511835 FJ481284.1 Microbes marine sponges sponge tissue clone XB1D09F prokMSA_id:512547 FJ481280.1 Microbes marine sponges sponge tissue clone XB1C06F prokMSA_id:513034 FJ481221.1 Microbes marine sponges sponge tissue clone XA1D06F prokMSA_id:513560 FJ481324.1 Microbes marine sponges sponge tissue clone XB3B11F prokMSA_id:513694 FJ481257.1 Microbes marine sponges sponge tissue clone XA3D11F prokMSA_id:533646 GQ263751.1 Structure Simulated Level Waste Site simulated level waste site clone WC1_a7 prokMSA_id:534036 CU918269.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534157 FJ481303.1 Microbes marine sponges sponge tissue clone XB2C08F prokMSA_id:535410 GQ397094.1 Functional unvegetated perhumid recently-deglaciated soils do not correlate shifts soil clone AK4DE2_09G prokMSA_id:537911 FJ479295.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p5a03ok prokMSA_id:538633 FJ481316.1 Microbes marine sponges sponge tissue clone XB2F11F prokMSA_id:539201 FJ481322.1 Microbes marine sponges sponge tissue clone XB3B02F prokMSA_id:539830 FJ481286.1 Microbes marine sponges sponge tissue clone XB1D12F prokMSA_id:540061 FJ481295.1 Microbes marine sponges sponge tissue clone XB1G04F prokMSA_id:540154 AM935798.1 Dynamics during identified and SSU libraries pilot-scale bioremediation process hydrocarbon-contaminated soil clone AMAC7 prokMSA_id:540671 AM490723.1 Linking and functional nutrient spiraling mats (USA) microbial mat sulfidic cave spring Lower Kane Cave Big Horn LKC22 clone SS_LKC22_UA33 prokMSA_id:542230 FJ481281.1 Microbes marine sponges sponge tissue clone XB1C09F prokMSA_id:545906 AM935058.1 Dynamics during identified and SSU libraries pilot-scale bioremediation process hydrocarbon-contaminated soil clone AMKG4 prokMSA_id:546971 FJ481242.1 Microbes marine sponges sponge tissue clone XA2F07F prokMSA_id:549492 FJ481243.1 Microbes marine sponges sponge tissue clone XA2F10F prokMSA_id:549983 FJ481307.1 Microbes marine sponges sponge tissue clone XB2D04F prokMSA_id:551360 FJ481261.1 Microbes marine sponges sponge tissue clone XA3F03F prokMSA_id:551412 FJ481287.1 Microbes marine sponges sponge tissue clone XB1E01F prokMSA_id:554130 FJ481291.1 Microbes marine sponges sponge tissue clone XB1F06F prokMSA_id:556907 FJ481249.1 Microbes marine sponges sponge tissue clone XA2H08F prokMSA_id:557303 FJ481258.1 Microbes marine sponges sponge tissue clone XA3D12F prokMSA_id:559838 FJ481309.1 Microbes marine sponges sponge tissue clone XB2D08F prokMSA_id:563683 GQ264370.1 Structure Simulated Level Waste Site simulated level waste site clone WW2_50 prokMSA_id:564976 FJ481311.1 Microbes marine sponges sponge tissue clone XB2E02F prokMSA_id:565487 FJ481330.1 Microbes marine sponges sponge tissue clone XB3E04F prokMSA_id:565624 FJ481220.1 Microbes marine sponges sponge tissue clone XA1C12F prokMSA_id:565735 FJ481338.1 Microbes marine sponges sponge tissue clone XB3F10F prokMSA_id:569414 FJ481278.1 Microbes marine sponges sponge tissue clone XB1C03F prokMSA_id:570015 AM935836.1 Dynamics during identified and SSU libraries pilot-scale bioremediation process hydrocarbon-contaminated soil clone AMAG11 prokMSA_id:570275 FJ481276.1 Microbes marine sponges sponge tissue clone XB1C01F prokMSA_id:570476 FJ481231.1 Microbes marine sponges sponge tissue clone XA1H02F prokMSA_id:571321 FJ481293.1 Microbes marine sponges sponge tissue clone XB1F09F prokMSA_id:576611 GQ487891.1 Microbial metal soil polluted heavy metals clone T1-11 prokMSA_id:576689 FJ479099.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p8g15ok prokMSA_id:576742 GQ264448.1 Structure Simulated Level Waste Site simulated level waste site clone WW3_149 prokMSA_id:578804 FJ481260.1 Microbes marine sponges sponge tissue clone XA3E10F prokMSA_id:580048 FJ481333.1 Microbes marine sponges sponge tissue clone XB3E09F prokMSA_id:582099 FJ481240.1 Microbes marine sponges sponge tissue clone XA2E06F prokMSA_id:582873 FJ481279.1 Microbes marine sponges sponge tissue clone XB1C04F prokMSA_id:583575 FJ481253.1 Microbes marine sponges sponge tissue clone XA3B06F prokMSA_id:583735 FJ478663.1 species richness estimates obtained nearly and simulated pyrosequencing-generated fragments -based surveys undisturbed tall grass prairie top 5 cm clone p11f07ok prokMSA_id:583774 FJ481302.1 Microbes marine sponges sponge tissue clone XB2C02F prokMSA_id:584629 EU862289.1 methods isolation nucleic acid lab scale EBPR activated sludge clone K75 prokMSA_id:584712 AM490722.1 Linking and functional nutrient spiraling mats (USA) microbial mat sulfidic cave spring Lower Kane Cave Big Horn LKC22 clone SS_LKC22_UA13 prokMSA_id:585031 FJ481229.1 Microbes marine sponges sponge tissue clone XA1G06F prokMSA_id:587152 FJ481219.1 Microbes marine sponges sponge tissue clone XA1C01F prokMSA_id:589164 FJ481300.1 Microbes marine sponges sponge tissue clone XB2A11F prokMSA_id:590540 FJ481341.1 Microbes marine sponges sponge tissue clone XB3G08F prokMSA_id:591318 GU214148.1 and evolution biota slimes Canadian paper mills slime mill taken wet section around papermaking machine clone IAFpp7225 2.18.2.4 o__Anaerolineales 1259 seqs 2.18.2.4.1 f__Anaerolinaceae 1259 seqs 2.18.2.4.1.1 Unclassified 21 seqs 2.18.2.4.1.1.1287 OTU 21 seqs prokMSA_id:2724 AJ009500.1 chlorobenzene-degrading consortium clone SJA-170 prokMSA_id:45276 AF229790.1 terephthalate-degrading consortium clone TA17 prokMSA_id:65476 AJ278173.1 anaerobic bioreactor clone SHD-299 prokMSA_id:66911 AJ306793.1 DCP-dechlorinating consortium clone SHD-14 prokMSA_id:83666 AB109438.1 mesophilic UASB granular sludge isolate str. YMTK-2 bacterium prokMSA_id:102061 AY426455.1 full-scale anaerobic UASB bioreactor treating paper mill wastewater clone E10 prokMSA_id:143650 AB240467.1 microbial structure rhizosphere biofilm Sapporo root-tip (0 40 mm) Phragmites Sosei River Sappro Japan clone SRRT21 prokMSA_id:208234 AB274514.1 packed-bed reactor clone CFB-25 prokMSA_id:226739 EF515576.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 30d08 prokMSA_id:277874 EU283577.1 Model Early Earth Harbors Deeply Divergent Divisions Anderson Lake clone A1480 prokMSA_id:284052 EU644094.1 and Samoylov Island Lena active layer -centred polygon near permafrost table; Rim_Bottom clone LD_RB_12 prokMSA_id:310689 FM178831.1 Monitoring abundance and expression 'dehalococcoides' species chloroethene-reductive dehalogenases tetrachloroethene-dechlorinating aquifer soil PCE f column clone 669_I24_PCE_column_outf prokMSA_id:312944 EF688175.1 Detection microbial sludge anaerobic wastewater treatment system clone 3B10_cons prokMSA_id:335917 FJ205842.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone E76 prokMSA_id:351144 FJ205827.1 microbial integrating library sequences and metagenome data obtained 454-pyrosequencing mesophilic biogas plant clone E55 prokMSA_id:419583 FJ973585.1 Periodic sulfide irruptions impact microbial structure and hypersaline lake water column clone SS_WC_15 prokMSA_id:451963 GQ065646.1 Topographical and Temporal Human Skin Microbiome skin occiput clone nbw91c06c1 prokMSA_id:511535 GQ406184.1 Benthic submerged sinkhole ecosystems sediment clone BK-45-22 prokMSA_id:547418 AB539936.1 Evidence syntrophic acetate oxidation coupled hydrogenotrophic methanogenesis -temperature petroleum reservoir Yabase oil field clone AR80B23 prokMSA_id:560513 CU918692.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563365 FJ535532.1 Microbial digestion swine wastewater anaerobic UASB reactor clone SWADLP3-18 2.18.2.4.1.10 g__WCHB1-05 38 seqs 2.18.2.4.1.10.1296 OTU 38 seqs prokMSA_id:2728 AF050564.1 contaminated aquifer clone WCHB1-43 prokMSA_id:2740 AF050562.1 contaminated aquifer clone WCHB1-05 prokMSA_id:2741 AF050563.1 contaminated aquifer clone WCHB1-80 prokMSA_id:2742 AF050565.1 contaminated aquifer clone WCHB1-44 prokMSA_id:2745 AJ009483.1 chlorobenzene-degrading consortium clone SJA-108 prokMSA_id:47263 AJ249100.1 DCP-dechlorinating consortium clone SHA-24 prokMSA_id:56469 AJ278174.1 anaerobic bioreactor clone SHD-245 prokMSA_id:77298 AF524858.1 sphagnum peat bog clone K-4b6 prokMSA_id:77570 AF524862.1 sphagnum peat bog clone K-5b9 prokMSA_id:91629 AY340840.1 sulfate-reducing fluidized-bed reactor clone SR_FBR_L52 prokMSA_id:100817 AY548938.1 ANAMMOX sludge clone 1-14 prokMSA_id:101137 AB186890.1 polychlorinated dioxin dechlorinating microcosm clone TSBW12 prokMSA_id:101467 AB186892.1 polychlorinated dioxin dechlorinating microcosm clone TSBb03 prokMSA_id:105928 AB186886.1 polychlorinated dioxin dechlorinating microcosm clone TSAC08 prokMSA_id:265485 EU522651.1 hydrocarbon-degrading methanogenic microbial consortia settling basin Northern Alberta Canada oil sands tailings enrichment clone Alk2-10G prokMSA_id:273204 EU522650.1 hydrocarbon-degrading methanogenic microbial consortia settling basin Northern Alberta Canada oil sands tailings enrichment clone Ctrl2-5F prokMSA_id:533105 CU927043.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540068 CU926357.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542380 CU921340.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545703 CU922872.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545855 CU922562.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546785 CU923372.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546911 CU925330.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547299 CU921024.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549108 CU922544.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549525 CU922729.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:550972 CU925077.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552013 CU926309.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552469 CU921004.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555270 CU923229.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:555657 CU921769.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:558977 CU921654.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559697 CU923309.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:560316 CU927021.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:561503 CU921226.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:568058 CU926406.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:572891 CU926179.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:579825 GU139317.1 lactate formate propionate hydrogen donors reductive dehalogenation trichloroethene continuous-f soil column (propionate- and TCE-fed) clone Jan3E03 2.18.2.4.1.2 g__Anaerolinea 26 seqs 2.18.2.4.1.2.1288 OTU 26 seqs prokMSA_id:44630 AB046413.1 Anaerolinea thermophila prokMSA_id:66944 AJ306749.1 DCP-dechlorinating consortium clone SHA-147 prokMSA_id:85265 AB109437.1 thermophilic UASB granular sludge isolate str. IMO-1 bacterium prokMSA_id:103032 AY555808.1 Bor Khlueng hot spring clone PK343 prokMSA_id:105100 AY426440.1 full-scale anaerobic UASB bioreactor treating paper mill wastewater clone B15 prokMSA_id:105721 AY426444.1 full-scale anaerobic UASB bioreactor treating paper mill wastewater clone B21 prokMSA_id:111123 AY862523.1 rice slurry clone TPD-7 prokMSA_id:112841 AY921673.1 farm soil clone AKYG659 prokMSA_id:112889 AY921883.1 farm soil clone AKYG493 prokMSA_id:113861 AY921672.1 farm soil clone AKYH789 prokMSA_id:114372 AY921671.1 farm soil clone AKYH711 prokMSA_id:143935 AB240304.1 microbial structure Phragmites rhizosphere biofilm reed bed reactor laboratory clone RB090 prokMSA_id:149727 AB234255.1 Biotransformation Polychlorinated Dioxins Microbial Dynamics Sediment Microcosms Contamination Levels sediment and soil clone LS4-225 prokMSA_id:194108 EF063624.1 Microbial ecology autotrophic denitrifying anaerobic methanogenic UASB reactor clone Eb85 prokMSA_id:209842 AB274512.1 packed-bed reactor clone CFB-23 prokMSA_id:214594 AB274513.1 packed-bed reactor clone CFB-24 prokMSA_id:226554 EF515730.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 32h04 prokMSA_id:227415 EF515553.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 30b01 prokMSA_id:320313 EF688150.1 Detection microbial sludge anaerobic wastewater treatment system clone 1D4_cons prokMSA_id:332648 FJ167504.1 microbiology granular sludge under autotrophic mixotrophic and heterotrophic denitrification conditions denitrifying bioreactor clone R3B-13 prokMSA_id:342046 FJ167471.1 microbiology granular sludge under autotrophic mixotrophic and heterotrophic denitrification conditions denitrifying bioreactor clone R2B-1 prokMSA_id:534001 AM935617.1 Dynamics during identified and SSU libraries pilot-scale bioremediation process hydrocarbon-contaminated soil clone AMDF6 prokMSA_id:542787 FJ977398.1 population effluent treated soil clone CS11 prokMSA_id:564996 CU922908.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:571133 AM934904.1 Dynamics during identified and SSU libraries pilot-scale bioremediation process hydrocarbon-contaminated soil clone AMJF6 prokMSA_id:571967 AM935530.1 Dynamics during identified and SSU libraries pilot-scale bioremediation process hydrocarbon-contaminated soil clone AMHE7 2.18.2.4.1.3 g__Bellilinea 5 seqs 2.18.2.4.1.3.1289 OTU 5 seqs prokMSA_id:142634 AB243672.1 Isolation and two filamentous anaerobes methanogenic propionate-degrading consortia thermophilic digester sludge prokMSA_id:539019 FJ638606.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCLunmb_41_62 prokMSA_id:549781 FJ638565.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCL40b_10a_16 prokMSA_id:551089 FJ638566.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCL40b_10b_36 prokMSA_id:567038 FJ638552.1 Temperature dependent succession sulfate reducing muddy southwestern Taiwan hot spring sediment clone KCL50b_05_30 2.18.2.4.1.4 g__C1_B004 16 seqs 2.18.2.4.1.4.1290 OTU 16 seqs prokMSA_id:69761 AF419689.1 Guaymas Basin hydrothermal sediment clone C1_B004 prokMSA_id:73947 AY082460.1 neutral pH mine biofilm clone 44a-B1-15 prokMSA_id:102925 AY426473.1 full-scale anaerobic UASB bioreactor treating paper mill wastewater clone E9 prokMSA_id:104266 AY592193.1 marine ANAMMOX sediment clone AY592193 prokMSA_id:105397 AY592429.1 deep-sea mud volcano clone Amsterdam-2B-73; BC20-2B-73 prokMSA_id:105404 AY592357.1 deep-sea mud volcano clone Amsterdam-1B-56; BC20-1B-56 prokMSA_id:107156 AY592393.1 deep-sea mud volcano clone Amsterdam-2B-34; BC20-2B-34 prokMSA_id:113321 AY542229.1 Gulf Mexico seafloor sediments clone GoM IDB-24 prokMSA_id:158754 DQ478736.1 UASB reactor treating brewery wastewater clone CLONG3 prokMSA_id:195376 EF198026.1 Microbial structures and thermophilic methanogenic consortia anaerobic mesophilic phenol-degrading enrichment clone MP15 prokMSA_id:221770 EF515657.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 31f04 prokMSA_id:264526 EU542512.1 Effects chemical structure concentration on pathways microbial during dechlorination coplanar PCBs slurries sediment and soil slurry clone Er-LLAYS-49 prokMSA_id:510501 FJ873272.1 Vertical and archaea methane-rich cold seep located base sediments Okhotsk Sea clone bOHTK-21 prokMSA_id:544436 CU924021.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:575995 CU917531.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:579753 AB447642.1 Microbial Structure and Population Dynamics Granules Expanded Granular Sludge Bed (EGSB) Reactors Treatment -strength Wastewater Temperature anaerobic granule sludge temperature clone 16.8h_Day0_BacB_21 2.18.2.4.1.5 g__Levilinea 4 seqs 2.18.2.4.1.5.1291 OTU 4 seqs prokMSA_id:2744 AJ009468.1 chlorobenzene-degrading consortium clone SJA-58 prokMSA_id:84512 AB109439.1 mesophilic UASB granular sludge isolate str. KIBI-1 bacterium prokMSA_id:544167 CU920961.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:549137 FN563384.1 Impact changing HRT OLR on prokaryotes involved biomethanizitaion and fuzzy logic controlled 2 phase reactor mesophilic biogas digester; beet silage served clone HAW-RM37-2-B-1755d-Repeat-Z 2.18.2.4.1.6 g__Longilinea 6 seqs 2.18.2.4.1.6.1292 OTU 6 seqs prokMSA_id:21437 AJ249113.1 DCP-dechlorinating consortium clone SHA-105 prokMSA_id:66909 AJ306796.1 DCP-dechlorinating consortium clone SHD-190 prokMSA_id:91696 AY340828.1 sulfate-reducing fluidized-bed reactor clone SR_FBR_E47 prokMSA_id:141303 AB243673.1 Isolation and two filamentous anaerobes methanogenic propionate-degrading consortia rice paddy soil prokMSA_id:236041 EU234156.1 receiving river and un techniques effluent WWTP treating penicillin G production wastewater clone B36 prokMSA_id:294887 EU700186.1 Study on Shantou Bay Marine Sediments Microorganisms sediment clone STU44 2.18.2.4.1.7 g__SHD-14 8 seqs 2.18.2.4.1.7.1293 OTU 8 seqs prokMSA_id:90530 AY221611.1 metal and hydrocarbon contaminated soil clone HS9-50 prokMSA_id:113519 AY922061.1 farm soil clone AKYG762 prokMSA_id:148687 AB234256.1 Biotransformation Polychlorinated Dioxins Microbial Dynamics Sediment Microcosms Contamination Levels sediment and soil clone LS4-260 prokMSA_id:149238 AB234254.1 Biotransformation Polychlorinated Dioxins Microbial Dynamics Sediment Microcosms Contamination Levels sediment and soil clone LS4-177 prokMSA_id:236900 EF644517.1 Structure and performance microbial involved reductive dechlorination 1122-tetrachloroethane ethene 1122 tetrachloroethane contaminated aquifer clone TC35 prokMSA_id:254674 DQ984536.1 FD oil-contaminated soil clone FD_33 prokMSA_id:533423 GQ263800.1 Structure Simulated Level Waste Site simulated level waste site clone WC1_b40 prokMSA_id:580644 GQ263783.1 Structure Simulated Level Waste Site simulated level waste site clone WC1_b20 2.18.2.4.1.8 g__SHD-231 55 seqs 2.18.2.4.1.8.1294 OTU 55 seqs prokMSA_id:2707 AF050568.1 contaminated aquifer clone WCHB1-63 prokMSA_id:104953 AY548942.1 ANAMMOX sludge clone 2-3 prokMSA_id:109816 CR933321.1 Evry municipal wastewater treatment plant clone 060A01_B_SD_P93 prokMSA_id:113815 AY553942.1 Baltimore Harbor sediment clone FA9 prokMSA_id:133917 DQ080134.1 sediment clone BFA-K16 prokMSA_id:156576 DQ447165.1 Microbial long-term performance full-scale synthesis gas fed bioreactor treating sulfate and zinc rich wastewater clone BUD04 prokMSA_id:156671 DQ447174.1 Microbial long-term performance full-scale synthesis gas fed bioreactor treating sulfate and zinc rich wastewater clone BUD14 prokMSA_id:204421 EF420218.1 methanogenic microbial populations northern Alberta Canada oil sands tailings pond clone MLSB_20m_12A_B prokMSA_id:246386 AB355084.1 Monitoring and archaeal two heavy polluted areas lake Egypt based on sediment Manzallah Lake clone Hados.Sed.Eubac.15 prokMSA_id:266873 EU542508.1 Effects chemical structure concentration on pathways microbial during dechlorination coplanar PCBs slurries sediment and soil slurry clone Er-LLAYS-45 prokMSA_id:267969 EU542486.1 Effects chemical structure concentration on pathways microbial during dechlorination coplanar PCBs slurries sediment and soil slurry clone Er-MLAYS-95 prokMSA_id:274010 EU381832.1 Rumen implicates Bacteroidetes major phylum rumen particulate phase fistulated Holstein heifer clone P5_E06 prokMSA_id:275003 EU522645.1 hydrocarbon-degrading methanogenic microbial consortia settling basin Northern Alberta Canada oil sands tailings enrichment clone Alk1-2G prokMSA_id:300528 EU465609.1 Evolution mammals and their gut microbes argali sheep feces clone AS1_aao39f02.Contig1 prokMSA_id:320971 FJ234901.1 Microbial structure mesophilic biogas mesophil anaerobic reactors fed corne silage clone TUM-dMbac-MR1-B1-K1A-78 prokMSA_id:511880 FJ645706.1 Microbial population dynamics during -temperature biotreatment PCP-contaminated wastestreams anaerobic sludge granules clone RC prokMSA_id:533539 CU917909.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533659 CU918755.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533858 CU918511.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535566 CU925221.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536010 CU926508.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536901 CU917900.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537284 CU926237.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537928 CU925361.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538403 CU927675.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538817 CU926051.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538818 CU926056.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539704 CU924860.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539948 CU927537.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544364 CU918906.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544935 CU921606.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545000 CU926468.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546137 CU921898.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:546542 CU927059.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:547737 CU927238.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:552613 CU923406.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:554498 FN436174.1 Molekularbiologische Charakterisierung der bakteriellen Populationsdynamik eines thermophil betriebenen Biogasfermenters zur Vergaerung nachwachsender Rohstoffe thermophilic biogas reactor fed renewable biomass clone HAW-R60-B-924d-AP prokMSA_id:554786 CU927438.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557288 CU917472.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557783 CU925981.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:557932 CU921596.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:559967 CU927139.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:562207 CU918016.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:563752 CU920557.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:565949 CU924468.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:566499 CU927516.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:566746 CU927005.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:567453 FN563258.1 Impact changing HRT OLR on prokaryotes involved biomethanizitaion and fuzzy logic controlled 2 phase reactor mesophilic biogas digester; beet silage served clone HAW-RM37-2-B-1209d-Z prokMSA_id:567916 CU919727.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:569482 FN563233.1 Impact changing HRT OLR on prokaryotes involved biomethanizitaion and fuzzy logic controlled 2 phase reactor mesophilic biogas digester; beet silage served clone HAW-RM37-2-B-1017d-M prokMSA_id:572661 CU919669.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573315 CU927026.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:573496 CU919884.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:574228 CU925994.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:589934 FN563252.1 Impact changing HRT OLR on prokaryotes involved biomethanizitaion and fuzzy logic controlled 2 phase reactor mesophilic biogas digester; beet silage served clone HAW-RM37-2-B-1209d-K 2.18.2.4.1.9 g__T78 1080 seqs 2.18.2.4.1.9.1295 OTU 1080 seqs prokMSA_id:1299 Z94009.1 sludge clone T78 prokMSA_id:1300 AF050570.1 contaminated aquifer clone WCHB1-57 prokMSA_id:2736 AF050569.1 contaminated aquifer clone WCHB1-31 prokMSA_id:2737 AJ009469.1 chlorobenzene-degrading consortium clone SJA-61 prokMSA_id:2738 AJ009492.1 chlorobenzene-degrading consortium clone SJA-131 prokMSA_id:34771 AF323767.2 benzoate-degrading consortium clone BA046 prokMSA_id:42924 AJ009488.1 chlorobenzene-degrading consortium clone SJA-117 prokMSA_id:48579 AF423184.1 Toluene-degrading methanogenic consortium clone Eub 4 consortium prokMSA_id:49666 AJ249111.1 DCP-dechlorinating consortium clone SHA-53 prokMSA_id:105381 AY540497.1 enrichment marine sediment clone A6 prokMSA_id:106022 AY426446.1 full-scale anaerobic UASB bioreactor treating paper mill wastewater clone B30 prokMSA_id:109895 CR933319.1 Evry municipal wastewater treatment plant clone 060A05_B_SD_P93 prokMSA_id:109903 CR933301.1 Evry municipal wastewater treatment plant clone 060G10_B_SD_P93 prokMSA_id:111230 CR933121.1 Evry municipal wastewater treatment plant clone 013F04_B_SD_P15 prokMSA_id:113730 AY553935.1 Baltimore Harbor sediment clone FA2 prokMSA_id:114475 AY953209.1 anaerobic swine lagoon clone A-2BM prokMSA_id:114495 AY953211.1 anaerobic swine lagoon clone A-2BP prokMSA_id:114507 AY953230.1 anaerobic swine lagoon clone A-2Y prokMSA_id:114542 AY953155.1 anaerobic swine lagoon clone B-1AI prokMSA_id:114563 AY953203.1 anaerobic swine lagoon clone A-2AS prokMSA_id:114677 AY953154.1 anaerobic swine lagoon clone B-1AG prokMSA_id:131372 DQ080186.1 phnl thr s: Evdnc invlvmnt Dhlcccds-lk ppltns sdmnt cln B45 prokMSA_id:133577 DQ080181.1 sediment clone A6 prokMSA_id:133965 DQ080132.1 sediment clone BFA-K2 prokMSA_id:135170 DQ018788.1 Unique Microbial Anaerobic Swine Lagoons anaerobic swine lagoon clone C-9 prokMSA_id:149107 AB248629.1 mesophilic anaerobic butyrate-degrading reactor clone BLB07 prokMSA_id:150842 CT574179.1 Evry municipal wastewater treatment plant clone 060D08_B_SD_P93 prokMSA_id:150958 CT574149.1 Evry municipal wastewater treatment plant clone 060H03_B_SD_P93 prokMSA_id:150988 CT573890.1 Evry municipal wastewater treatment plant clone 012H06_B_SD_P15 prokMSA_id:151116 CT574198.1 Evry municipal wastewater treatment plant clone 060B06_B_SD_P93 prokMSA_id:152077 CT573939.1 Evry municipal wastewater treatment plant clone 012A01_B_SD_P15 prokMSA_id:152122 CT573908.1 Evry municipal wastewater treatment plant clone 012F01_B_SD_P15 prokMSA_id:152219 CT573868.1 Evry municipal wastewater treatment plant clone 013C07_B_SD_P15 prokMSA_id:152666 CT574202.1 Evry municipal wastewater treatment plant clone 060A11_B_SD_P93 prokMSA_id:152857 CT574200.1 Evry municipal wastewater treatment plant clone 060B02_B_SD_P93 prokMSA_id:153140 CT573953.1 Evry municipal wastewater treatment plant clone 009G01_B_SD_P15 prokMSA_id:153335 CT574102.1 Evry municipal wastewater treatment plant clone 061G05_B_SD_P93 prokMSA_id:153426 CT574096.1 Evry municipal wastewater treatment plant clone 061H07_B_SD_P93 prokMSA_id:153587 CT574095.1 Evry municipal wastewater treatment plant clone 061H08_B_SD_P93 prokMSA_id:153708 CT573955.1 Evry municipal wastewater treatment plant clone 009F09_B_SD_P15 prokMSA_id:153876 CT574169.1 Evry municipal wastewater treatment plant clone 060E09_B_SD_P93 prokMSA_id:153921 CT573849.1 Evry municipal wastewater treatment plant clone 013F05_B_SD_P15 prokMSA_id:154039 CT573928.1 Evry municipal wastewater treatment plant clone 012B06_B_SD_P15 prokMSA_id:154420 CT574160.1 Evry municipal wastewater treatment plant clone 060F10_B_SD_P93 prokMSA_id:154594 CT574075.1 Evry municipal wastewater treatment plant clone 053G11_B_DI_P58 prokMSA_id:154837 CT574034.1 Evry municipal wastewater treatment plant clone 008B06_B_SD_P15 prokMSA_id:154904 CT574188.1 Evry municipal wastewater treatment plant clone 060C05_B_SD_P93 prokMSA_id:155671 CT574010.1 Evry municipal wastewater treatment plant clone 008F01_B_SD_P15 prokMSA_id:155689 CT573965.1 Evry municipal wastewater treatment plant clone 009E06_B_SD_P15 prokMSA_id:156289 CT573961.1 Evry municipal wastewater treatment plant clone 009E12_B_SD_P15 prokMSA_id:156367 CT573931.1 Evry municipal wastewater treatment plant clone 012B01_B_SD_P15 prokMSA_id:156564 CT574168.1 Evry municipal wastewater treatment plant clone 060E10_B_SD_P93 prokMSA_id:156773 DQ447169.1 Microbial long-term performance full-scale synthesis gas fed bioreactor treating sulfate and zinc rich wastewater clone BUD09 prokMSA_id:156853 DQ447173.1 Microbial long-term performance full-scale synthesis gas fed bioreactor treating sulfate and zinc rich wastewater clone BUD13 prokMSA_id:157071 DQ168648.1 sediment-free PCB-dechlorinating enrichment culture clone JN18_A7_F* prokMSA_id:159283 DQ330010.1 Guerrero Negro hypersaline microbial mat clone 02N1A224 prokMSA_id:177249 EF174276.1 direct activated sludge compost maturation stage clone H45-814 prokMSA_id:177951 EF174277.1 direct activated sludge compost maturation stage clone H46-814 prokMSA_id:183274 EF174246.1 direct activated 2nd maturation stage sludge clone D21-814 prokMSA_id:184869 EF174275.1 direct activated sludge compost maturation stage clone H44-814 prokMSA_id:186484 EF198025.1 Microbial structures and thermophilic methanogenic consortia anaerobic mesophilic phenol-degrading enrichment clone MP14 prokMSA_id:187903 EF174253.1 direct activated 2nd maturation stage sludge clone D30-814 prokMSA_id:190598 EF174247.1 direct activated 2nd maturation stage sludge clone D22-814 prokMSA_id:217391 EF515525.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 29f06 prokMSA_id:217428 EF515715.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 32f04 prokMSA_id:217931 EF515549.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 30a07 prokMSA_id:218339 EF515706.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 32e04 prokMSA_id:218815 EF515594.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 30f06 prokMSA_id:219704 EF515503.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 29c10 prokMSA_id:219710 EF515729.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 32g11 prokMSA_id:222893 EF515579.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 30e01 prokMSA_id:224439 EF515681.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 32b07 prokMSA_id:224766 EF515504.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 29d02 prokMSA_id:224860 EF515624.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 31b08 prokMSA_id:224967 EF515542.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 29h09 prokMSA_id:224991 EF515532.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 29g03 prokMSA_id:226163 EF515701.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 32d09 prokMSA_id:226990 EF515508.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 29d06 prokMSA_id:227006 EF515641.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 31d06 prokMSA_id:227025 EF515646.1 Electricigen Enrichment MFC full-scale anaerobic bioreactor sludge treating brewery waste clone 31e02 prokMSA_id:235321 EU246150.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P4-D05 prokMSA_id:236007 EU245322.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H6-A01 prokMSA_id:240254 EU246096.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P3-C09 prokMSA_id:241403 EU246132.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P4-A11 prokMSA_id:242261 EU246039.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P2-B05 prokMSA_id:242369 EU245265.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H5-A06 prokMSA_id:243798 EU037963.1 Bioenergy production: microbial conversion residual oil natural enriched gas condensate-contaminated aquifer clone E449-5 prokMSA_id:248667 EU246296.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P6-E04 prokMSA_id:251739 EU245244.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-H4-F09 prokMSA_id:255133 EU246020.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P1-F03 prokMSA_id:255901 EU246234.1 Miniprimer new lens viewing world hypersaline microbial mat clone MAT-CR-P5-F05 prokMSA_id:259082 EU522646.1 hydrocarbon-degrading methanogenic microbial consortia settling basin Northern Alberta Canada oil sands tailings enrichment clone Ctrl2-8E prokMSA_id:259453 EU542479.1 Effects chemical structure concentration on pathways microbial during dechlorination coplanar PCBs slurries sediment and soil slurry clone Er-MLAYS-59 prokMSA_id:262830 EU542437.1 Effects chemical structure concentration on pathways microbial during dechlorination coplanar PCBs slurries sediment and soil slurry clone Er-MS-24 prokMSA_id:264388 EU522648.1 hydrocarbon-degrading methanogenic microbial consortia settling basin Northern Alberta Canada oil sands tailings enrichment clone BTEX1-7H prokMSA_id:267098 EU522649.1 hydrocarbon-degrading methanogenic microbial consortia settling basin Northern Alberta Canada oil sands tailings enrichment clone Ctrl1-8D prokMSA_id:270415 EU542444.1 Effects chemical structure concentration on pathways microbial during dechlorination coplanar PCBs slurries sediment and soil slurry clone Er-MS-49 prokMSA_id:271371 EU542463.1 Effects chemical structure concentration on pathways microbial during dechlorination coplanar PCBs slurries sediment and soil slurry clone Er-MLAYS-6 prokMSA_id:274864 EU591631.1 Microbial Ecology Focused-Pulsed Electric Field Sludge Pretreatment Methanogenic Systems anaerobic methanogenic reactor clone MTSBac-C5 prokMSA_id:276353 EU522647.1 hydrocarbon-degrading methanogenic microbial consortia settling basin Northern Alberta Canada oil sands tailings enrichment clone Ctrl2-3B prokMSA_id:278445 EU283574.1 Model Early Earth Harbors Deeply Divergent Divisions Anderson Lake clone A1226 prokMSA_id:281467 EU644236.1 and Samoylov Island Lena active layer -centred polygon near surface horizon; Rim_Top clone LD_Ba_Top_B4 prokMSA_id:282676 EU644092.1 and Samoylov Island Lena active layer -centred polygon near permafrost table; Rim_Bottom clone LD_RB_10 prokMSA_id:313405 FJ189531.1 digester anaerobic sludge clone EUB_10 prokMSA_id:321679 EU887805.1 and RFLP anaerobes Nisargruna biogas plant anaerobic digester clone 15IIISN prokMSA_id:328326 EU887807.1 and RFLP anaerobes Nisargruna biogas plant anaerobic digester clone 12IIISN prokMSA_id:328721 EU887788.1 and RFLP anaerobes Nisargruna biogas plant anaerobic digester clone 1IISN prokMSA_id:330077 EU887789.1 and RFLP anaerobes Nisargruna biogas plant anaerobic digester clone 48IIISN prokMSA_id:334279 FJ234904.1 Microbial structure mesophilic biogas mesophil anaerobic reactors fed corne silage clone TUM-dMbac-MR1-B1-K1A-106 prokMSA_id:344277 FJ189549.1 digester anaerobic sludge clone EUB_28 prokMSA_id:352796 EU812966.1 Microbial structure mesophilic reactors biogas reactor fed corn silage clone TUM-Mbac-MR4-B1-KC32 prokMSA_id:513670 GQ249571.1 Microbial anaerobic sediments Bay Cadiz (Spain) marine sediment: 12-14 cm layer clone D29 prokMSA_id:532614 FJ799126.1 Microbial Responsible Intermediates Degradation Anaerobic Digestion System Determined anaerobic digestion systems containing butyrate inoculated sludge cassava wastewater treatment plant clone BA53 prokMSA_id:532683 CU925097.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532687 CU927370.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532691 CU925425.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532732 CU920508.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532733 CU921697.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532760 CU923839.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532776 CU921613.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532777 CU920342.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532940 CU918721.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532954 CU917804.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532959 CU921252.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:532986 CU921685.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533033 CU918369.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533175 CU927218.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533195 CU920496.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533267 CU918981.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533347 CU922325.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533368 CU924687.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533435 CU925484.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533456 CU924470.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533479 CU918734.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533555 CU921164.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533591 CU923815.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533594 CU923768.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533629 CU922356.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533677 CU920234.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533747 CU924233.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533800 CU924916.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533811 CU917488.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533822 CU925979.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533829 CU924350.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533897 CU919243.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533964 CU920537.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:533986 CU920249.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534014 CU925965.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534047 CU919908.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534101 CU923093.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534203 CU919795.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534270 CU919165.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534287 CU920667.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534303 CU924863.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534392 CU927505.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534513 CU923787.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534540 CU921473.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534657 CU919033.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534725 CU923197.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534759 CU926639.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534778 CU921321.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534784 CU926201.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534792 CU927038.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534831 CU921972.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534836 CU920488.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534862 CU925556.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534928 CU923741.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534930 CU922367.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534939 CU920573.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:534989 CU923914.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535005 CU923362.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535028 CU924212.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535189 CU921715.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535256 CU918350.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535267 CU923434.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535336 CU920402.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535380 CU923772.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535524 CU921415.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535664 CU925822.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535665 CU922384.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535844 CU917560.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:535959 CU926852.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536024 CU919257.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536079 CU924011.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536080 CU927454.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536093 CU917878.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536132 CU927442.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536163 CU917486.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536214 CU920886.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536257 CU919473.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536263 CU924367.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536268 CU926076.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536288 CU921238.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536315 CU918983.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536360 CU923209.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536395 CU920344.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536397 CU921371.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536449 CU922592.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536551 CU920209.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536566 CU921688.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536579 CU925098.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536620 CU927195.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536626 CU926710.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536677 CU918023.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536704 CU923996.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536747 CU922456.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536810 CU924254.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536823 CU919010.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536922 CU920419.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536963 CU923873.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:536982 GU180175.1 Impact coplanar PCBs on microbial activity anaerobic estuarine sediments sediment and soil slurry clone Er-LAYS-53 prokMSA_id:537075 CU927482.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537114 CU922526.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537121 CU917916.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537162 CU917565.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537176 CU917514.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537228 CU922192.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537231 GQ468577.1 library biogas slurry anaerobic fermentation pig manure clone 145 prokMSA_id:537232 CU924346.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537514 CU926039.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537517 CU922981.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537539 CU927452.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537608 CU923998.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537634 CU923044.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537637 CU924356.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537671 CU925331.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537759 CU920104.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537799 CU927524.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537817 CU926512.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:537933 CU919025.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538003 CU917977.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538012 CU924256.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538056 CU918368.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538166 CU924038.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538201 CU922726.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538212 CU922845.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538379 CU917542.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538381 CU925300.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538450 CU917727.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538503 CU924555.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538556 CU923773.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538590 CU927736.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538601 FN563232.1 Impact changing HRT OLR on prokaryotes involved biomethanizitaion and fuzzy logic controlled 2 phase reactor mesophilic biogas digester; beet silage served clone HAW-RM37-2-B-1017d-L prokMSA_id:538605 CU919053.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538624 CU923455.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538665 CU924635.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538666 CU922517.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538676 CU921979.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538704 CU918955.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538972 CU923923.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:538991 CU920283.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539146 CU918071.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539211 CU926196.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539232 CU918684.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539340 CU925883.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539365 CU920658.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539469 CU920633.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539487 CU927657.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539494 CU924866.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539503 CU926530.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539537 CU920779.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539571 CU924422.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539621 CU920308.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539660 CU922047.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539662 CU918810.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539764 CU924429.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539772 CU925664.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539795 CU925117.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539807 CU920339.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:539826 CU921445.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540090 CU927006.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540094 CU918029.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540128 CU924394.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540153 CU927120.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540318 CU924414.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540342 CU920715.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540385 CU924231.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540424 CU920110.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540451 CU918256.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540488 CU924757.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540514 CU927076.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540550 CU920219.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540591 CU924238.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540596 CU927351.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540627 CU923730.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540635 CU924425.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540651 CU927540.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540727 CU927097.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540777 CU921324.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540788 CU923909.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540898 CU927683.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:540979 CU922478.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541019 CU927386.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541122 CU925262.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541163 CU924375.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541196 CU923528.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541230 CU927368.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541309 CU924129.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541366 CU923480.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541409 CU920820.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541490 CU921498.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541637 CU923495.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541644 CU923804.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541648 CU926031.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541682 CU924294.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541690 CU926094.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541697 CU924141.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541722 CU926808.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541759 CU918613.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541902 CU920579.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541909 CU923485.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541948 CU924497.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:541951 CU926290.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542042 CU922851.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542080 CU922389.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542083 CU918263.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542130 CU926734.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542141 CU923844.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542168 CU922474.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542294 CU927797.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542297 CU922334.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542308 CU920441.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542373 CU917581.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542390 CU920427.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542393 CU922048.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542397 CU920762.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542442 CU919201.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542521 CU920245.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542560 CU923784.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542582 CU920613.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542588 CU919170.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542649 CU920576.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542696 CU926789.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542749 CU918022.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542774 CU919863.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542804 CU919587.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542836 CU917696.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542850 CU920581.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:542898 CU925829.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543041 CU921712.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543122 CU922806.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543145 CU924436.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543162 CU919694.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543216 CU925674.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543241 CU921780.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543355 CU924682.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543357 CU926614.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543513 CU925850.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543552 CU918328.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543555 CU920196.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543598 CU921171.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543632 CU924598.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543769 CU925527.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543776 CU926500.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543780 CU920333.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543789 CU923107.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543807 CU923965.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543873 CU922178.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543874 CU925787.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543879 CU920780.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543892 CU921412.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543950 CU920139.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:543960 CU924175.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544022 CU924868.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544051 CU921085.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544057 CU926230.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544063 CU926901.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone 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prokMSA_id:544290 CU927142.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544362 CU918286.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544505 CU925225.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544588 CU921627.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544663 CU920244.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544714 CU923880.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544723 CU923432.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544798 CU925644.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544807 CU924082.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:544913 CU920578.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545047 CU918730.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545130 CU924932.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545133 CU923176.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545137 CU925742.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545238 CU922115.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545262 CU920171.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545307 CU926262.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone prokMSA_id:545345 CU917672.1 Towards definition core microorganisms involved digestion mesophilic anaerobic digester which treats municipal wastewater sludge clone 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prokMSA_id:545765 CU924749.1 Towards definition core microorganisms involved digestion me